BLASTX nr result

ID: Papaver23_contig00019475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019475
         (579 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24922.3| unnamed protein product [Vitis vinifera]               96   3e-18
ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis v...    96   3e-18
ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984...    85   1e-14
ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|2...    78   1e-12

>emb|CBI24922.3| unnamed protein product [Vitis vinifera]
          Length = 1452

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
 Frame = -2

Query: 578  EKLDGEVLELKNATEKSLWLKDLEAFEIKLNEQDVRDIKAEEERKVLKSQVMKDAGMNAG 399
            +KL+  V +LK AT K+LW+ DL+A E +L+EQD  D +AEE RK LKS+VM +AGM   
Sbjct: 1098 DKLNKGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSEAGMKVS 1157

Query: 398  KQAPKNPRKYXXXXXXXXXXXAL----PTSSMEIDDVSEVXXXXXXXXXXXXXXXXXXAS 231
            +QAPKNPRK                   +S+ME++ V EV                    
Sbjct: 1158 RQAPKNPRKNNKKANNAEPAAETMDVSASSAMEMESVPEVVKPKGRAAPRKAPAKKKEMP 1217

Query: 230  VDI---DEEDDIPSLTDRLAASNLDSSPD 153
              +   +++D++  L +RLAA NL+SSPD
Sbjct: 1218 TSVLKDEDDDEVHELKERLAAYNLESSPD 1246


>ref|XP_002274267.1| PREDICTED: DNA topoisomerase 2-like [Vitis vinifera]
          Length = 1489

 Score = 96.3 bits (238), Expect = 3e-18
 Identities = 58/149 (38%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
 Frame = -2

Query: 578  EKLDGEVLELKNATEKSLWLKDLEAFEIKLNEQDVRDIKAEEERKVLKSQVMKDAGMNAG 399
            +KL+  V +LK AT K+LW+ DL+A E +L+EQD  D +AEE RK LKS+VM +AGM   
Sbjct: 1135 DKLNKGVDDLKKATPKALWITDLDALERELDEQDKNDARAEETRKQLKSRVMSEAGMKVS 1194

Query: 398  KQAPKNPRKYXXXXXXXXXXXAL----PTSSMEIDDVSEVXXXXXXXXXXXXXXXXXXAS 231
            +QAPKNPRK                   +S+ME++ V EV                    
Sbjct: 1195 RQAPKNPRKNNKKANNAEPAAETMDVSASSAMEMESVPEVVKPKGRAAPRKAPAKKKEMP 1254

Query: 230  VDI---DEEDDIPSLTDRLAASNLDSSPD 153
              +   +++D++  L +RLAA NL+SSPD
Sbjct: 1255 TSVLKDEDDDEVHELKERLAAYNLESSPD 1283


>ref|XP_002298421.1| predicted protein [Populus trichocarpa] gi|222845679|gb|EEE83226.1|
            predicted protein [Populus trichocarpa]
          Length = 1468

 Score = 90.5 bits (223), Expect = 2e-16
 Identities = 58/151 (38%), Positives = 77/151 (50%), Gaps = 5/151 (3%)
 Frame = -2

Query: 578  EKLDGEVLELKNATEKSLWLKDLEAFEIKLNEQDVRDIKAEEERKVLKSQVMKDAGMNAG 399
            +KL+GEV  L+  T   LW+KDLEA E++L+  D  D +AEE RK LK     +AG    
Sbjct: 1130 DKLNGEVDNLRKTTPIVLWVKDLEALEMQLDVLDKYDAEAEEARKKLKGDANGEAGFKVS 1189

Query: 398  KQAPKNPRKY----XXXXXXXXXXXALPTSSMEIDDVSEVXXXXXXXXXXXXXXXXXXAS 231
            KQAPKNPRKY                  +S+ME ++ +EV                    
Sbjct: 1190 KQAPKNPRKYTKKAINEEVSVETMGKASSSAMETENAAEVVKPKGRAGSRKAPAKKQEKP 1249

Query: 230  VDI-DEEDDIPSLTDRLAASNLDSSPDKDTE 141
              I DE+D+I SL DRL A  LDSSP++  +
Sbjct: 1250 SPISDEDDEIESLKDRLKAYRLDSSPEQSAD 1280


>gb|AAN85207.1| DNA topoisomerase II [Nicotiana tabacum] gi|26984168|gb|AAN85208.1|
            DNA topoisomerase II [Nicotiana tabacum]
          Length = 1482

 Score = 84.7 bits (208), Expect = 1e-14
 Identities = 57/151 (37%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
 Frame = -2

Query: 578  EKLDGEVLELKNATEKSLWLKDLEAFEIKLNEQDVRDIKAEEERKVLKSQVMKDAGMNAG 399
            ++L+GEV +++NAT K LWLKDL+  E +L+EQD  DI+AEE R+ +K +VM  AG+ A 
Sbjct: 1125 DQLNGEVEDMRNATPKLLWLKDLDVLEKQLDEQDKIDIQAEEAREKIKKKVMNAAGLKAP 1184

Query: 398  KQAP-KNPRKYXXXXXXXXXXXALPT-SSMEIDDVSEVXXXXXXXXXXXXXXXXXXASVD 225
            K  P KN +K             +   +S    +V+EV                   +V+
Sbjct: 1185 KPKPRKNVKKASVVESTAEPMDRVSCFNSGNRSNVTEVVKPKARGGSKKAPAKAKPIAVE 1244

Query: 224  IDEE---DDIPSLTDRLAASNLDSSPDKDTE 141
             +EE   D++ +L DRLAA NL+SSPD   E
Sbjct: 1245 DEEEEEDDEVLALKDRLAAYNLNSSPDHSAE 1275


>ref|XP_002314046.1| predicted protein [Populus trichocarpa] gi|222850454|gb|EEE88001.1|
            predicted protein [Populus trichocarpa]
          Length = 1482

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 57/157 (36%), Positives = 75/157 (47%), Gaps = 11/157 (7%)
 Frame = -2

Query: 578  EKLDGEVLELKNATEKSLWLKDLEAFEIKLNEQDVRDIKAEEERKVLKSQVMK-DAGMNA 402
            +KL+GEV  L+  T K LW+KDLEA E++L+  D  D +AEE R+ LK    K +AG   
Sbjct: 1134 DKLNGEVDSLRKTTPKVLWVKDLEALEMQLDMLDEYDAEAEEARRKLKGGGAKGEAGFKV 1193

Query: 401  GKQAPKNPRKYXXXXXXXXXXXAL--PTSSMEIDDVSEVXXXXXXXXXXXXXXXXXXASV 228
             KQAPK PRK                 +SS  I+  S                    A +
Sbjct: 1194 SKQAPKYPRKNTKKAINEEVSVETTGTSSSFAIETASSENAAAVVKPKGRAGSKKAPAKM 1253

Query: 227  --------DIDEEDDIPSLTDRLAASNLDSSPDKDTE 141
                    D DE+D+I SL DRL A  LDSSP++  +
Sbjct: 1254 EKLSPVLDDFDEDDEIESLKDRLNAYRLDSSPEQSAD 1290


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