BLASTX nr result

ID: Papaver23_contig00019445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019445
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...    82   8e-14
ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana] g...    79   4e-13
ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|3554...    78   1e-12

>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
           predicted protein [Populus trichocarpa]
          Length = 460

 Score = 97.1 bits (240), Expect = 2e-18
 Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 12/172 (6%)
 Frame = -2

Query: 533 WKSSTNS------------FMDFVDRVLLLRNMSDIKKFCLTCDGEYFDDQRIKDWITTA 390
           WKS+TN             FMDFVDRVL LR  S+I +F L+C+ +  D  R+  WI+ A
Sbjct: 62  WKSTTNLTFFGLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVK-DDPSRVGTWISAA 120

Query: 389 IKCRVEELVLSRFAAYDEDYSDIIPVDLYTCESLTLLDINFHDHDTKLHLPQTILFPRLK 210
           +   V++L L      D + S ++P  L+ CE+LT L+IN       L LP +I    LK
Sbjct: 121 VNRNVKDLYLE---LRDFEASFVLPHCLFNCETLTELEINM---PYILKLPSSISLSCLK 174

Query: 209 ILRLSEMSFSDEEFTQQLFSGCPALEELTLKYCDWKDLNFISSTLKVLTLVD 54
           IL L E+ F+D+  TQQLFS  P L EL +  C+W +L  +S +   L  +D
Sbjct: 175 ILNLYEVIFTDDHSTQQLFS-LPNLVELEIHECNWMNLVAVSISAPKLQSLD 225


>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 61/160 (38%), Positives = 92/160 (57%)
 Frame = -2

Query: 533 WKSSTNSFMDFVDRVLLLRNMSDIKKFCLTCDGEYFDDQRIKDWITTAIKCRVEELVLSR 354
           +K+    FM+ V+RVLLLR+ S+I+KF L+C  +  D  R + W++ A+   V+EL ++ 
Sbjct: 87  FKAKRKIFMNSVERVLLLRDSSNIEKFTLSCGID--DATRTRTWVSAAVNRNVKELCVN- 143

Query: 353 FAAYDEDYSDIIPVDLYTCESLTLLDINFHDHDTKLHLPQTILFPRLKILRLSEMSFSDE 174
           F    E  S + P+ L+TC +LT L I  H     L L  +I  P LKIL L  + F DE
Sbjct: 144 FYEGGESESFVSPLCLFTCATLTKLKITSHG---VLRLSSSISLPCLKILSLQHVVFPDE 200

Query: 173 EFTQQLFSGCPALEELTLKYCDWKDLNFISSTLKVLTLVD 54
           + TQQ+ +    LE+L + Y DWK+L  I+ +   L  +D
Sbjct: 201 DSTQQILN-LRTLEKLKISYYDWKNLKAITISAPKLRSLD 239


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
           gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
           [Medicago truncatula]
          Length = 467

 Score = 81.6 bits (200), Expect = 8e-14
 Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 4/194 (2%)
 Frame = -2

Query: 572 DFREWKSPKARREWKSSTNSFMDFVDRVLLLRNMSDIKKFCLTCDGEYFDDQRIKDWITT 393
           DFR+  SPK   +   S +  +D VD+  LL   + IKK  +       D  ++   +++
Sbjct: 66  DFRD-SSPKRNSK---SPDCLVDLVDQ--LLHKSNRIKKLFIELPVTIVDAGKVSSMLSS 119

Query: 392 AIKCRVEELVLSRFAAYDEDYSDIIPVDLYTCESLTLLDINFHDHDTKLHLPQTILFPRL 213
           A+   V +L L+      E+   ++P       SLT LDI F   D+   +P  I FP L
Sbjct: 120 ALMHDVHDLTLN---LESENSRFVLPNSFSASRSLTKLDIVFGFLDS---VPDGICFPSL 173

Query: 212 KILRLSEMSFSDEEFTQQLFSGCPALEELTLKYCDWKDLNFISSTLKVLTLVDCFTRADF 33
           KIL  + ++F++E+  Q+LFSGCP L++L+ + C W ++N IS  +  L  +D F R+  
Sbjct: 174 KILSFAHVTFTNEKSAQRLFSGCPVLQDLSFEKCYWVNIN-ISVAIPTLKKLDIFFRSSS 232

Query: 32  ----PAITKIDAPN 3
                 + KIDA N
Sbjct: 233 LDRNSCMFKIDAVN 246


>ref|NP_191445.1| putative F-box protein [Arabidopsis thaliana]
           gi|75264355|sp|Q9LXR6.1|FB207_ARATH RecName:
           Full=Putative F-box protein At3g58860
           gi|7630081|emb|CAB88303.1| putative protein [Arabidopsis
           thaliana] gi|332646320|gb|AEE79841.1| putative F-box
           protein [Arabidopsis thaliana]
          Length = 457

 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 62/166 (37%), Positives = 84/166 (50%), Gaps = 3/166 (1%)
 Frame = -2

Query: 548 KARREWKSSTNSFMDFVDRVLLLRNMSDIKKFCLTCDGEYFDDQRIKDWITTAIKCRVEE 369
           + +RE      SFMDFVDRVL L+  S IKKF L       D  R+  WI   ++  V  
Sbjct: 61  EGKREKDGILRSFMDFVDRVLALQGASPIKKFSLNVK-TGVDPDRVDRWICNVLQRGVSH 119

Query: 368 LVLSRFAAYDEDYSDIIPVDLYTCESLTLLDINFHDHDTKLHLPQTILF-PRLKILRLSE 192
           L L  F  ++E+YS  +P ++   ++L  L   +      L+L    +F P LK L L  
Sbjct: 120 LAL--FMDFEEEYS--LPYEISVSKTLVELKTGY---GVDLYLWDDDMFLPMLKTLVLES 172

Query: 191 MSFSDEEFTQQLFSGCPALEELTLKYCDWKDLNFI--SSTLKVLTL 60
           + F   +F Q L   CP LEEL L   +WKD N I  SS+LK L +
Sbjct: 173 VEFGRGQF-QTLLPACPVLEELMLLNMEWKDRNVILSSSSLKNLKI 217


>ref|XP_003599874.1| F-box family-3 [Medicago truncatula] gi|355488922|gb|AES70125.1|
           F-box family-3 [Medicago truncatula]
          Length = 642

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 5/181 (2%)
 Frame = -2

Query: 530 KSSTNSFMDFVDRVLLLRNMSDIKKFCLTCDGEYFDDQRIKDWITTAIKCRVEELVLSRF 351
           K+  N  +D V R  L+   + I++  +       D  ++   I++A   +++ L LS  
Sbjct: 241 KNKANCLLDLVGR--LMHKSTRIERLGVQIFRSSIDTDKVSSIISSAANHKLQYLDLS-- 296

Query: 350 AAYDEDYSDIIPVDLYTCESLTLLDINFHDHDTKLHLPQTILFPRLKILRLSEMSFSDEE 171
              D + + ++P      ESL  L +        LH+P  I FP LK L ++ ++F++E 
Sbjct: 297 -LGDRNDNFVLPHSFPAFESLNELRLGLQ---FTLHIPSGICFPILKTLVVTNVTFANEN 352

Query: 170 FTQQLFSGCPALEELTLKYCDWKDLNFIS---STLKVLTLVDCFTRADFPAI--TKIDAP 6
             QQLFSGCP L+EL L  C W+ +N IS   STL+ LT+       D+  I   KIDA 
Sbjct: 353 SAQQLFSGCPVLQELELDNCYWEHINQISLSISTLRKLTISYLMLCVDYDHIMKLKIDAV 412

Query: 5   N 3
           N
Sbjct: 413 N 413


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