BLASTX nr result

ID: Papaver23_contig00019301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019301
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40063.3| unnamed protein product [Vitis vinifera]               95   2e-17
ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 prote...    95   2e-17
ref|XP_002868626.1| hypothetical protein ARALYDRAFT_493894 [Arab...    84   5e-14
ref|NP_851110.1| Sister chromatid cohesion 1 protein 2 [Arabidop...    78   3e-12
gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidops...    77   4e-12

>emb|CBI40063.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
 Frame = +2

Query: 2    SSSLVFKRRKAPVTALGTWRANTVPKLCQDFTKPLILGCSW-LEDLFYKKKYKVQQVEAD 178
            SS L+ KRRK P TA   W+   +  L Q F + LI   S  L  LF+ KK    ++  +
Sbjct: 383  SSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLEALIPCISLELRSLFHAKKLMTPELVVN 442

Query: 179  -KASNNSTEKVHETQSKYPEQHVDMEESYVDPSPLTSIGLVKCTTSRVSGENAAEFFSGS 355
             +A +        T ++  ++     E+    S L  +  V   T       A+ F S  
Sbjct: 443  VEAPDGLVVPGSPTVNQLLKETAIAPETPAIHSTLMGVSEVHKLTDSDRVVPASSFESSQ 502

Query: 356  EAEKKAATEIPDLGLNLTDEEIGQHE-AHQKSGELSVTTRKLAKYLSESFQSKKEHNEKE 532
            + +  +  E  D+ +N   EEI   E A+QK    S  T  +A+YL  SF ++K+  ++ 
Sbjct: 503  QRQSSSENEEFDILMN---EEINSCEVANQKINGWSDRTGMVARYLCRSFLNQKKQGDEN 559

Query: 533  VLSLEPMLEGRTKRESAKLFYEILVLKTLDMINVKQEAPYDDIVLMPATLQTE 691
             ++L   L G+TK+ES++LFYEILVLK+   ++V+Q   Y DI +M  TLQ E
Sbjct: 560  AVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNNAYGDIRVM-KTLQME 611


>ref|XP_002270491.1| PREDICTED: sister chromatid cohesion 1 protein 2-like [Vitis
            vinifera]
          Length = 756

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 76/233 (32%), Positives = 117/233 (50%), Gaps = 3/233 (1%)
 Frame = +2

Query: 2    SSSLVFKRRKAPVTALGTWRANTVPKLCQDFTKPLILGCSW-LEDLFYKKKYKVQQVEAD 178
            SS L+ KRRK P TA   W+   +  L Q F + LI   S  L  LF+ KK    ++  +
Sbjct: 518  SSDLIRKRRKVPHTAYDAWKVYQIANLSQGFLEALIPCISLELRSLFHAKKLMTPELVVN 577

Query: 179  -KASNNSTEKVHETQSKYPEQHVDMEESYVDPSPLTSIGLVKCTTSRVSGENAAEFFSGS 355
             +A +        T ++  ++     E+    S L  +  V   T       A+ F S  
Sbjct: 578  VEAPDGLVVPGSPTVNQLLKETAIAPETPAIHSTLMGVSEVHKLTDSDRVVPASSFESSQ 637

Query: 356  EAEKKAATEIPDLGLNLTDEEIGQHE-AHQKSGELSVTTRKLAKYLSESFQSKKEHNEKE 532
            + +  +  E  D+ +N   EEI   E A+QK    S  T  +A+YL  SF ++K+  ++ 
Sbjct: 638  QRQSSSENEEFDILMN---EEINSCEVANQKINGWSDRTGMVARYLCRSFLNQKKQGDEN 694

Query: 533  VLSLEPMLEGRTKRESAKLFYEILVLKTLDMINVKQEAPYDDIVLMPATLQTE 691
             ++L   L G+TK+ES++LFYEILVLK+   ++V+Q   Y DI +M  TLQ E
Sbjct: 695  AVTLSQFLTGKTKKESSRLFYEILVLKSKGYVDVEQNNAYGDIRVM-KTLQME 746


>ref|XP_002868626.1| hypothetical protein ARALYDRAFT_493894 [Arabidopsis lyrata subsp.
            lyrata] gi|297314462|gb|EFH44885.1| hypothetical protein
            ARALYDRAFT_493894 [Arabidopsis lyrata subsp. lyrata]
          Length = 805

 Score = 84.0 bits (206), Expect = 5e-14
 Identities = 48/119 (40%), Positives = 67/119 (56%), Gaps = 1/119 (0%)
 Frame = +2

Query: 332  AAEFFSGSEAEKKAATEIPDLGLNLTDEEIGQHEAHQKSGEL-SVTTRKLAKYLSESFQS 508
            A+ F S  E       E  DL + L ++E+   E H    E  S  TR +AK+L ++F  
Sbjct: 683  ASPFTSFEEHPSVYYVENRDLDMILMNDEVNADETHDLQQETWSARTRNVAKFLEKTFVE 742

Query: 509  KKEHNEKEVLSLEPMLEGRTKRESAKLFYEILVLKTLDMINVKQEAPYDDIVLMPATLQ 685
            ++E  E+E +SL  +  GRT++ESA LFYE LVLKT   + VKQ  PY D++L P   Q
Sbjct: 743  QREREEEEKVSLLQLCRGRTQKESASLFYETLVLKTKGYLEVKQNRPYSDVLLTPFARQ 801


>ref|NP_851110.1| Sister chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
            gi|18157645|gb|AAL62058.1|AF400127_1 RAD21-1 variant 2
            [Arabidopsis thaliana] gi|332007219|gb|AED94602.1| Sister
            chromatid cohesion 1 protein 2 [Arabidopsis thaliana]
          Length = 809

 Score = 77.8 bits (190), Expect = 3e-12
 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
 Frame = +2

Query: 332  AAEFFSGSEAEKKAATEIPDLGLNLTDEEIGQHEAHQKSGEL-SVTTRKLAKYLSESFQS 508
            A+ F S  E       E  DL   L ++E+   E      E  S  TR +AK+L ++F  
Sbjct: 687  ASPFTSFEEHPSVYYVENRDLDTILMNDEVNADERQDLQQETWSSRTRNVAKFLEKTFLE 746

Query: 509  KKEHNEKEVLSLEPMLEGRTKRESAKLFYEILVLKTLDMINVKQEAPYDDIVLM 670
            ++E  E+E +SL  +  GRT++ESA+LFYE LVLKT   + VKQ  PY D+ LM
Sbjct: 747  QREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYVEVKQNHPYSDVFLM 800


>gb|AAG44842.1|AF281154_1 cohesion family protein SYN2 [Arabidopsis thaliana]
          Length = 809

 Score = 77.4 bits (189), Expect = 4e-12
 Identities = 46/114 (40%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
 Frame = +2

Query: 332  AAEFFSGSEAEKKAATEIPDLGLNLTDEEIGQHEAHQKSGEL-SVTTRKLAKYLSESFQS 508
            A+ F S  E       E  DL   L ++E+   E      E  S  TR +AK+L ++F  
Sbjct: 687  ASPFTSFEEHPSVYYVENRDLDTILMNDEVNADERQDLQQETWSSRTRNVAKFLEKTFLE 746

Query: 509  KKEHNEKEVLSLEPMLEGRTKRESAKLFYEILVLKTLDMINVKQEAPYDDIVLM 670
            ++E  E+E +SL  +  GRT++ESA+LFYE LVLKT   + VKQ  PY D+ LM
Sbjct: 747  QREREEEEKVSLLQLCRGRTQKESARLFYETLVLKTKGYLEVKQNHPYSDVFLM 800


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