BLASTX nr result

ID: Papaver23_contig00019258 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019258
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    67   2e-09
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    65   5e-09
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    65   6e-09
ref|XP_002532278.1| conserved hypothetical protein [Ricinus comm...    58   1e-06
ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    56   3e-06

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 23/192 (11%)
 Frame = -2

Query: 526 GC-GWRSKGKISFMLNTIGGGAYSNGDIYW-------HTFNKIVAFNLANEEFRLLPVPL 371
           GC GWRS GK+S+ L         NG ++W           ++V+F+L +E+FR +P P 
Sbjct: 213 GCPGWRSLGKVSYRLVRRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPD 272

Query: 370 CMIGRKYGDRCGLIELGGNLCLYMNKLRMEIWSFKKSSHLKESWCMDFDIDYEGVVG--- 200
           C    +      ++    ++ +Y N  R+EIW  K+  ++KESW  +++I      G   
Sbjct: 273 CGGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKE-YNVKESWVKEYNIGAYMPKGLKQ 331

Query: 199 ------------SYGWRFEPILLTKNEEIIFKYDNFVLYSYDMKTAILKRISDDDKASID 56
                       S G     + + KN EI+ +Y N  L SYD K    K I  D + +  
Sbjct: 332 NLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPKKGKFKDI--DLQGTPK 389

Query: 55  YFSAAKPIAHIN 20
           +F     +  +N
Sbjct: 390 WFQTVVHVGSLN 401


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 56/173 (32%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
 Frame = -2

Query: 526 GCG-WRSKGKISFMLNTIGGGAYSNGDIYW-------HTFNKIVAFNLANEEFRLLPVPL 371
           GC  WRS GK+S+ L     GA  NG ++W           ++V+F+L +E+FR +  P 
Sbjct: 214 GCPEWRSLGKVSYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPD 273

Query: 370 CMIGRKYGDRCGLIELGGNL--CLYMNKLRMEIWSFKKSSHLKESWCMDFDIDYEGVVG- 200
           C  G        L+ L G L   +Y N  R+EIW  K+  ++KESW  +++I      G 
Sbjct: 274 C--GGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKE-YNVKESWVKEYNIGAYMPKGL 330

Query: 199 --------------SYGWRFEPILLTKNEEIIFKYDNFVLYSYDMKTAILKRI 83
                         S G     + + KN EI+ +Y N VL SYD K    K I
Sbjct: 331 KQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKNGKFKDI 383


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 53/169 (31%), Positives = 82/169 (48%), Gaps = 23/169 (13%)
 Frame = -2

Query: 517 WRSKGKISFMLNTIGGGAYSNGDIYWHTFNK------IVAFNLANEEFRLLPVPLCMIGR 356
           WRS GK+S+ L+     A  NG ++W T  +      IV+F+LA+E+FR +P P C  G 
Sbjct: 218 WRSLGKVSYQLDRWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDC--GG 275

Query: 355 KYGDRCGLIELGGNL--CLYMNKLRMEIWSFKKSSHLKESWCMDFDIDYEGVVGSYG--- 191
                  L+ LGG L   ++ +  ++E+W  K+   +KESW  +F+I      G      
Sbjct: 276 LSRCNYHLLVLGGCLSAAVHRSNGKLEVWVMKEYD-VKESWIKEFNIGAHLPKGLKQDVN 334

Query: 190 -----WRFEP-------ILLTKNEEIIFKYDNFVLYSYDMKTAILKRIS 80
                WR  P       + L KN EI+ +Y   VL SY+ +    K ++
Sbjct: 335 RPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYNPERGKFKDLT 383


>ref|XP_002532278.1| conserved hypothetical protein [Ricinus communis]
           gi|223528012|gb|EEF30093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 263

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 24/162 (14%)
 Frame = -2

Query: 523 CGWRSKGKISFMLNTIGGGAYSNGDIYW-------HTFNKIVAFNLANEEFRLLPVPLCM 365
           C WRS GK+S+ L      A  NG ++W       +   ++V+ +L +E+FR +P P C 
Sbjct: 69  CEWRSLGKMSYQLVRRQSEALVNGRLHWVSRPRRYNPARRLVSLDLVDEQFREVPKPDC- 127

Query: 364 IGRKYGDRCGLIELGGNL--CLYMNKLRMEIWSFKKSSHLKESWCMDFDIDYEGVVG--- 200
            G        L+ L G L   +Y N  R+EIW+ K+  ++KESW   + +      G   
Sbjct: 128 -GGLSRCNYHLVVLKGCLSAAVYCNYGRLEIWTMKE-YNVKESWVKQYIVGTHMPKGLKQ 185

Query: 199 ------------SYGWRFEPILLTKNEEIIFKYDNFVLYSYD 110
                       S G     + L KN E++ +Y + VL +YD
Sbjct: 186 NLERPTKIWKNASNGRVVRILGLLKNGELLLEYKSRVLVTYD 227


>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 45/158 (28%), Positives = 81/158 (51%), Gaps = 15/158 (9%)
 Frame = -2

Query: 517 WRSKGKISFMLNTIGG-GAYSNGDIYW--------HTFNKIVAFNLANEEFRLLPVPLCM 365
           WR  G + + ++  G  G ++NG ++W        +  N +VA +L  E++R +  P   
Sbjct: 190 WRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQP--- 246

Query: 364 IGRKYGDRCGLIELG---GNLCLYMNKL--RMEIWSFKKSSHLKESWCMDFDIDYEGVVG 200
              +Y D+   I+LG   G LC   N L  R+++W  K+   +KESW   F +    V+G
Sbjct: 247 ---EYKDKNFYIDLGVLRGCLCFLANFLGERVDVWMMKEYG-VKESWTKLFSVAQYEVIG 302

Query: 199 SYGWRFEPILLTKN-EEIIFKYDNFVLYSYDMKTAILK 89
            +    +P+  +K+ +E++ ++DN  L  YD+K   +K
Sbjct: 303 -FLRSLKPLAYSKSGDEVLIEHDNLDLCWYDLKRKQVK 339


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