BLASTX nr result

ID: Papaver23_contig00019231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019231
         (819 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...    80   5e-13
ref|XP_002531144.1| conserved hypothetical protein [Ricinus comm...    77   6e-12
ref|XP_002319679.1| f-box family protein [Populus trichocarpa] g...    73   9e-11
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...    71   3e-10
gb|ACU22680.1| unknown [Glycine max]                                   71   3e-10

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score = 80.1 bits (196), Expect = 5e-13
 Identities = 58/205 (28%), Positives = 106/205 (51%), Gaps = 5/205 (2%)
 Frame = +1

Query: 1   SWKP-GYIPYEFSRETPPGVLSNGALHWFANS---SSSPRVLIAMDVGDESIHEIAQPGK 168
           SW+  G +PY        GV +NGALHW       S+   +++A+D+G E   E+ QP +
Sbjct: 189 SWRRIGDMPYCVHYPGANGVFANGALHWVVGENPESNVANIVVALDLGVEDYREVLQP-E 247

Query: 169 FAINGGYRHLDVLDRCLCMLYSSDDSSDSFEVWVMKDYRVRESWLQVYNIPRMNVYGRTL 348
           +     Y  L VL  CLC L  ++   +  +VW+MK+Y V+ESW +++++ +  V G  L
Sbjct: 248 YKDKNFYIDLGVLRGCLCFL--ANFLGERVDVWMMKEYGVKESWTKLFSVAQYEVIG-FL 304

Query: 349 RCLRQIQCLRDG-ELLCEIQTQPDDKADDSTMVLYDSEDDKVRILKINGDRSYFTHSIFQ 525
           R L+ +   + G E+L E         D+  +  YD +  +V+      +R       F+
Sbjct: 305 RSLKPLAYSKSGDEVLIE--------HDNLDLCWYDLKRKQVK------NRIPGIPYSFE 350

Query: 526 IESYVQSSVSLNSGTYVDQEQEEED 600
            +++V+S +S++   ++D   +++D
Sbjct: 351 ADTFVESLISVSPNRHLDGRTQDDD 375


>ref|XP_002531144.1| conserved hypothetical protein [Ricinus communis]
           gi|223529257|gb|EEF31229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 389

 Score = 76.6 bits (187), Expect = 6e-12
 Identities = 53/168 (31%), Positives = 88/168 (52%), Gaps = 5/168 (2%)
 Frame = +1

Query: 19  IPYEFSRETPPGVLSNGALHWFA---NSSSSPRVLIAMDVGDESIHEIAQPGKFAINGGY 189
           +PY        GVL++GALHW     +  SSP V++  ++G     E+ QP   ++  G+
Sbjct: 212 MPYHTRTSQKVGVLADGALHWVMGRYDDLSSPNVIVGYNLGTCEFLEVPQPD--SVGNGF 269

Query: 190 R-HLDVLDRCLCMLYSSDDSSDSFEVWVMKDYRVRESWLQVYNIPRMNVYGRTLRCLRQI 366
           R  + +    LC ++++DD     +VW+MK+Y V+ESW ++ +IP +      +R L   
Sbjct: 270 RVDIGLFGTWLC-IFATDDLDMCIDVWMMKEYGVKESWTKLCSIPHIETCYDFIRPLSFW 328

Query: 367 QCLRDGELLCEIQTQPDDKADDSTMVLYDSEDDKVR-ILKINGDRSYF 507
           +  R  E+L E+        DD+ +V YD E  +VR +L     +SYF
Sbjct: 329 K--RGSEVLLEL--------DDARIVWYDIEKKRVRDVLLRRSQKSYF 366


>ref|XP_002319679.1| f-box family protein [Populus trichocarpa]
           gi|222858055|gb|EEE95602.1| f-box family protein
           [Populus trichocarpa]
          Length = 310

 Score = 72.8 bits (177), Expect = 9e-11
 Identities = 41/115 (35%), Positives = 66/115 (57%), Gaps = 5/115 (4%)
 Frame = +1

Query: 1   SWKP-GYIPYEFSRETPPGVLSNGALHWFA---NSSSSPRVLIAMDVGDESIHEIAQPGK 168
           +W+  G IPY+   + P  VL NG L+W        SS R++++ D+ +E  +E+ +P  
Sbjct: 170 TWRSLGEIPYQIFGKRPSQVLVNGRLNWATWPIYRCSSARLIVSFDLSEEKFYEVPRPDC 229

Query: 169 FAINGGYRHLDVLDRCL-CMLYSSDDSSDSFEVWVMKDYRVRESWLQVYNIPRMN 330
            +++    +L VL  CL   +Y  D     FE+WVMK+Y V+ESW+ +YNI  M+
Sbjct: 230 GSLDKFNHNLVVLGGCLSASVYRKDGY---FEIWVMKEYNVKESWINLYNIDIMD 281


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
 Frame = +1

Query: 1   SWK-----PGYIPYEFSRETPPGVLSNGALHWFANSSSSPRVLIAMDVGDESIHEIAQP- 162
           SW+     P  +P++ S     G   +G ++W A++ SS  +++++D+  ES  E+ QP 
Sbjct: 225 SWRRIQEFPSGLPFDES-----GKFVSGTVNWLASNDSSSLIIVSLDLHKESYEEVLQPY 279

Query: 163 -GKFAINGGYRHLDVLDRCLCMLYSSDDSSDSFEVWVMKDYRVRESWLQVYNIPRMNVYG 339
            G   +N     L VL  CLC+L  +D   D   VW+MKDY  +ESW +++ +P M +  
Sbjct: 280 YGVAVVN---LTLGVLRDCLCVLSHADTFLD---VWLMKDYGNKESWTKLFRVPYMGISD 333

Query: 340 RTLRCLRQIQCLRDGELLCEIQTQPDDKADDSTMVLYDSEDDKVRILKINGDRSYFTHSI 519
             L   + +    D ++L E          +S + +Y+S +   +I  I     Y T  +
Sbjct: 334 SYL-YTKALCISEDDQVLMEF---------NSELAVYNSRNGTSKIPDIQDIYMYMTPEV 383

Query: 520 FQIESYVQSSV 552
           + IES +   V
Sbjct: 384 Y-IESLISPCV 393


>gb|ACU22680.1| unknown [Glycine max]
          Length = 393

 Score = 70.9 bits (172), Expect = 3e-10
 Identities = 54/191 (28%), Positives = 93/191 (48%), Gaps = 7/191 (3%)
 Frame = +1

Query: 1   SWK-----PGYIPYEFSRETPPGVLSNGALHWFANSSSSPRVLIAMDVGDESIHEIAQP- 162
           SW+     P  +P++ S     G   +G ++W A++ SS  +++++D+  ES  E+ QP 
Sbjct: 225 SWRRIQEFPSGLPFDES-----GKFVSGTVNWLASNDSSSLIIVSLDLHKESYEEVLQPY 279

Query: 163 -GKFAINGGYRHLDVLDRCLCMLYSSDDSSDSFEVWVMKDYRVRESWLQVYNIPRMNVYG 339
            G   +N     L VL  CLC+L  +D   D   VW+MKDY  +ESW +++ +P M +  
Sbjct: 280 YGVAVVN---LTLGVLRDCLCVLSHADTFLD---VWLMKDYGNKESWTKLFRVPYMGISD 333

Query: 340 RTLRCLRQIQCLRDGELLCEIQTQPDDKADDSTMVLYDSEDDKVRILKINGDRSYFTHSI 519
             L   + +    D ++L E          +S + +Y+S +   +I  I     Y T  +
Sbjct: 334 SYL-YTKALCISEDDQVLMEF---------NSELAVYNSRNGTSKIPDIQDIYMYMTPEV 383

Query: 520 FQIESYVQSSV 552
           + IES +   V
Sbjct: 384 Y-IESLISPCV 393


Top