BLASTX nr result

ID: Papaver23_contig00019205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019205
         (1437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABQ23585.1| putative KH-domain containing protein [Medicago t...   412   e-113
ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [...   400   e-109
ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [...   400   e-109
ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Ara...   394   e-107
ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arab...   394   e-107

>gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
          Length = 334

 Score =  412 bits (1060), Expect = e-113
 Identities = 211/337 (62%), Positives = 256/337 (75%)
 Frame = +3

Query: 105  MESPESYITSTTPKTSTEEVSQKQTSVPVKSSSISDDKERPTYIKFLVSNAAAGSVIGKG 284
            MESPES   S+       E  +K  S P   S   D  E+PTY++FLVSN+AAGSVIGKG
Sbjct: 1    MESPESSYVSSP------EGPRKHASSPPPDSPSQDSVEKPTYVRFLVSNSAAGSVIGKG 54

Query: 285  GSTITDFQSQSGARIQLSRNNEFFPGTSDRIVMISGDFGEVTHAIELILSKLLSEVHSED 464
            GSTITDFQSQSGARIQLSRNNEFFPGT+DRI+M+SG   EV  A+ELILSKLLSE+HSED
Sbjct: 55   GSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLRAVELILSKLLSELHSED 114

Query: 465  GDDTQPISKVRLIVPNXXXXXXXXXXXXXXXXFIEESQAGIKISPQDHTYVGLNDRLVTV 644
             +D +P +KVRLIVPN                FIEESQAGIKISPQD++Y G NDR+VTV
Sbjct: 115  DNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDNSYYGQNDRIVTV 174

Query: 645  TGTLEEQMRAIDLVFSKLVEDAHYGHSMNTPFSYAGMNFSGYHGYSYGYMVPPAGAAPYN 824
            TGTL+EQMR IDL+ SKL ED HY HSM++PF+Y+G   SGY G  Y Y++P      YN
Sbjct: 175  TGTLDEQMRGIDLIVSKLAEDPHYSHSMSSPFTYSGAYVSGYQGVPYTYVLPSVAPPAYN 234

Query: 825  SVNYRPNVSRAKYHSNKEDPSDSVTIGVADEHVGIVLGRGGRNIMEINQVSGARIKISDR 1004
             VNYRPN + AK+ ++KED S+S+TIGVADEH+G+V+GRGGRNI +I+Q SGA+IKISDR
Sbjct: 235  GVNYRPNGTGAKFQNSKEDRSNSMTIGVADEHIGLVVGRGGRNISDISQTSGAKIKISDR 294

Query: 1005 GDFMADTHDRKVTITGTKSAIRAAENMIKQRVASVTD 1115
            GD+++ T DRKVTITG++ AIR AE+MI Q+VA  T+
Sbjct: 295  GDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATE 331


>ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  400 bits (1028), Expect = e-109
 Identities = 209/338 (61%), Positives = 257/338 (76%), Gaps = 1/338 (0%)
 Frame = +3

Query: 105  MESPESYITSTTPKTSTEEVSQKQTSVPVKSSSISDDKERPTYIKFLVSNAAAGSVIGKG 284
            MES ES   S     S E   +   S P KS S+ D +E+PTYI+FLVSN+AAGSVIGKG
Sbjct: 1    MESTESSYVS-----SPEGPRKHAASPPPKSPSL-DSEEKPTYIRFLVSNSAAGSVIGKG 54

Query: 285  GSTITDFQSQSGARIQLSRNNEFFPGTSDRIVMISGDFGEVTHAIELILSKLLSEVHSED 464
            GSTITDFQSQSGARIQLSRN+EFFPGT+DRI+M+SG   E+  A+ELILSKLLSE+HSED
Sbjct: 55   GSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSED 114

Query: 465  GDDTQPISKVRLIVPNXXXXXXXXXXXXXXXXFIEESQAGIKISPQDHTYVGLNDRLVTV 644
             +D +P +KVRL+VPN                FIE+SQAGIKISPQD+ Y G NDRLVT+
Sbjct: 115  DNDAEPKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDNNYYGQNDRLVTL 174

Query: 645  TGTLEEQMRAIDLVFSKLVEDAHYGHSMNTPFSYAGMNFSGYHGYSYGYMVPPAGAAPYN 824
            TG+ +EQMRAI+L+ SKL ED HY  SMN+PFSY G+ FSGY G  Y Y++P      YN
Sbjct: 175  TGSFDEQMRAIELIVSKLSEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYN 234

Query: 825  SVNYRPN-VSRAKYHSNKEDPSDSVTIGVADEHVGIVLGRGGRNIMEINQVSGARIKISD 1001
            +VNYRPN  +  K  ++KE+ S+S+T+GVADEH+G+V+GRGGRNIMEI+Q SGARIKISD
Sbjct: 235  AVNYRPNGAAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQASGARIKISD 294

Query: 1002 RGDFMADTHDRKVTITGTKSAIRAAENMIKQRVASVTD 1115
            RGD+++ T DRKVTITG++ AIR AE+MI Q+VA  T+
Sbjct: 295  RGDYVSGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332


>ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
          Length = 337

 Score =  400 bits (1027), Expect = e-109
 Identities = 209/338 (61%), Positives = 256/338 (75%), Gaps = 1/338 (0%)
 Frame = +3

Query: 105  MESPESYITSTTPKTSTEEVSQKQTSVPVKSSSISDDKERPTYIKFLVSNAAAGSVIGKG 284
            MES ES   S     S E   +   S P K  S+ D +E+PTYI+FLVSN+AAGSVIGKG
Sbjct: 1    MESTESSYVS-----SPEGPRKHAASPPPKPPSL-DSEEKPTYIRFLVSNSAAGSVIGKG 54

Query: 285  GSTITDFQSQSGARIQLSRNNEFFPGTSDRIVMISGDFGEVTHAIELILSKLLSEVHSED 464
            GSTITDFQSQSGARIQLSRN+EFFPGT+DRI+M+SG   E+  A+ELILSKLLSE+HSED
Sbjct: 55   GSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGAINEIQRAVELILSKLLSELHSED 114

Query: 465  GDDTQPISKVRLIVPNXXXXXXXXXXXXXXXXFIEESQAGIKISPQDHTYVGLNDRLVTV 644
             +D +P +KVRL+VPN                FIE+SQAGIKISPQD+ Y G NDRLV +
Sbjct: 115  DNDAEPKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDNNYYGQNDRLVML 174

Query: 645  TGTLEEQMRAIDLVFSKLVEDAHYGHSMNTPFSYAGMNFSGYHGYSYGYMVPPAGAAPYN 824
            TGT +EQMRAI+L+ SKL ED HY  SMN+PFSY G+ FSGY G  Y Y++P      YN
Sbjct: 175  TGTFDEQMRAIELIVSKLAEDPHYAQSMNSPFSYPGVYFSGYQGVPYTYVLPSVAPPAYN 234

Query: 825  SVNYRPN-VSRAKYHSNKEDPSDSVTIGVADEHVGIVLGRGGRNIMEINQVSGARIKISD 1001
            +VNYRPN  +  K  ++KE+ S+S+T+GVADEH+G+V+GRGGRNIMEI+QVSGARIKISD
Sbjct: 235  AVNYRPNGTAGGKLQNSKEERSNSLTMGVADEHIGLVVGRGGRNIMEISQVSGARIKISD 294

Query: 1002 RGDFMADTHDRKVTITGTKSAIRAAENMIKQRVASVTD 1115
            RGD+++ T DRKVTITG++ AIR AE+MI Q+VA  T+
Sbjct: 295  RGDYISGTTDRKVTITGSQRAIRTAESMILQKVAYATE 332


>ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
            gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long
            form) protein [Arabidopsis thaliana]
          Length = 334

 Score =  394 bits (1012), Expect = e-107
 Identities = 202/337 (59%), Positives = 256/337 (75%)
 Frame = +3

Query: 105  MESPESYITSTTPKTSTEEVSQKQTSVPVKSSSISDDKERPTYIKFLVSNAAAGSVIGKG 284
            MES ESY        S EE++++  S     SS +D  E+PT+I+FLVSNAAAGSVIGKG
Sbjct: 1    MESTESYAAG-----SPEELAKR--SPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKG 53

Query: 285  GSTITDFQSQSGARIQLSRNNEFFPGTSDRIVMISGDFGEVTHAIELILSKLLSEVHSED 464
            GSTIT+FQ++SGARIQLSRN EFFPGT+DRI+MISG   EV + +ELIL KL SE+H+ED
Sbjct: 54   GSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVNGLELILDKLHSELHAED 113

Query: 465  GDDTQPISKVRLIVPNXXXXXXXXXXXXXXXXFIEESQAGIKISPQDHTYVGLNDRLVTV 644
            G++ +P  ++RL+VPN                FIEES+AGIKISP D+T+ GL+DRLVT+
Sbjct: 114  GNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTL 173

Query: 645  TGTLEEQMRAIDLVFSKLVEDAHYGHSMNTPFSYAGMNFSGYHGYSYGYMVPPAGAAPYN 824
            +GT EEQMRAIDL+ +KL ED HY  ++++P+SYAG+ +SG+HG  Y Y +P    A YN
Sbjct: 174  SGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYN 233

Query: 825  SVNYRPNVSRAKYHSNKEDPSDSVTIGVADEHVGIVLGRGGRNIMEINQVSGARIKISDR 1004
            SVNY PN S  KY ++KE+ S +VTIGVADEH+G+VLGRGGRNIMEI Q++GARIKISDR
Sbjct: 234  SVNYAPNGSGGKYQNHKEEASTTVTIGVADEHIGLVLGRGGRNIMEITQMTGARIKISDR 293

Query: 1005 GDFMADTHDRKVTITGTKSAIRAAENMIKQRVASVTD 1115
            GDFM+ T DRKV+ITG + AI+ AE MIKQ+V S T+
Sbjct: 294  GDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATE 330


>ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
            lyrata] gi|297318987|gb|EFH49409.1| hypothetical protein
            ARALYDRAFT_487225 [Arabidopsis lyrata subsp. lyrata]
          Length = 334

 Score =  394 bits (1011), Expect = e-107
 Identities = 201/337 (59%), Positives = 257/337 (76%)
 Frame = +3

Query: 105  MESPESYITSTTPKTSTEEVSQKQTSVPVKSSSISDDKERPTYIKFLVSNAAAGSVIGKG 284
            MES ESY  +     S EE++++  S     SS +D  E+PT+I+FLVSNAAAGSVIGKG
Sbjct: 1    MESTESYAAA-----SPEELAKR--SPEPHDSSEADSAEKPTHIRFLVSNAAAGSVIGKG 53

Query: 285  GSTITDFQSQSGARIQLSRNNEFFPGTSDRIVMISGDFGEVTHAIELILSKLLSEVHSED 464
            GSTIT+FQ++SGARIQLSRN EFFPGT+DRI+MISG   EV + +ELIL KL SE+H+ED
Sbjct: 54   GSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVINGLELILDKLHSELHAED 113

Query: 465  GDDTQPISKVRLIVPNXXXXXXXXXXXXXXXXFIEESQAGIKISPQDHTYVGLNDRLVTV 644
            G++ +P  ++RL+VPN                FIEES+AGIKISP D+T+ GL+DRLVT+
Sbjct: 114  GNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGLSDRLVTL 173

Query: 645  TGTLEEQMRAIDLVFSKLVEDAHYGHSMNTPFSYAGMNFSGYHGYSYGYMVPPAGAAPYN 824
            +GT EEQMRAIDL+ +KL ED HY  ++++P+SYAG+ +SG+HG  Y Y +P    A YN
Sbjct: 174  SGTFEEQMRAIDLILAKLTEDDHYSQNVHSPYSYAGLFYSGFHGPPYAYALPSVATAGYN 233

Query: 825  SVNYRPNVSRAKYHSNKEDPSDSVTIGVADEHVGIVLGRGGRNIMEINQVSGARIKISDR 1004
            SVNY PN S  KY ++K++ S +VTIGVADEH+G+VLGRGGRNIMEI Q++GARIKISDR
Sbjct: 234  SVNYAPNGSGGKYQNHKDEASTTVTIGVADEHIGLVLGRGGRNIMEITQITGARIKISDR 293

Query: 1005 GDFMADTHDRKVTITGTKSAIRAAENMIKQRVASVTD 1115
            GDFM+ T DRKV+ITG + AI+ AE MIKQ+V S T+
Sbjct: 294  GDFMSGTTDRKVSITGPQRAIQQAETMIKQKVDSATE 330


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