BLASTX nr result

ID: Papaver23_contig00019165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019165
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE75808.1| unknown [Picea sitchensis]                              60   2e-07
ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g...    59   3e-07
ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabi...    58   8e-07
ref|XP_002891645.1| KH domain-containing protein [Arabidopsis ly...    58   8e-07
ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   2e-06

>gb|ADE75808.1| unknown [Picea sitchensis]
          Length = 131

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/43 (60%), Positives = 36/43 (83%)
 Frame = +2

Query: 2   AKITGHDARPGSAEGVVIVSGTSDQIHAAQSLIHAFILSGQTA 130
           AK+  HD RPG+ EG+V++SGT +Q HAAQSL+ AFI+SGQ++
Sbjct: 88  AKVIIHDPRPGATEGLVVISGTPEQTHAAQSLLQAFIMSGQSS 130


>ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
           max]
          Length = 559

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/42 (66%), Positives = 32/42 (76%)
 Frame = +2

Query: 2   AKITGHDARPGSAEGVVIVSGTSDQIHAAQSLIHAFILSGQT 127
           A +  HD +PG+ EG+VIVSG  DQ HAAQSLI AFIL GQT
Sbjct: 516 ANVVVHDPKPGATEGLVIVSGAPDQTHAAQSLIQAFILCGQT 557


>ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
           gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical
           protein [Arabidopsis thaliana]
           gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical
           protein; 15135-12645 [Arabidopsis thaliana]
           gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis
           thaliana] gi|110735740|dbj|BAE99849.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332194564|gb|AEE32685.1| RNA-binding KH
           domain-containing protein [Arabidopsis thaliana]
          Length = 621

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   AKITGHDARPGSAEGVVIVSGTSDQIHAAQSLIHAFILSGQT 127
           A +  HD + G+ EG+V+VSGTSDQ H AQSL+HAFIL GQ+
Sbjct: 580 ANVVVHDPKAGTTEGLVVVSGTSDQAHFAQSLLHAFILCGQS 621


>ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
           gi|297337487|gb|EFH67904.1| KH domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 622

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 26/42 (61%), Positives = 33/42 (78%)
 Frame = +2

Query: 2   AKITGHDARPGSAEGVVIVSGTSDQIHAAQSLIHAFILSGQT 127
           A +  HD + G+ EG+V+VSGTSDQ H AQSL+HAFIL GQ+
Sbjct: 581 ANVVVHDPKAGATEGLVVVSGTSDQAHFAQSLLHAFILCGQS 622


>ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
           max]
          Length = 565

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/42 (61%), Positives = 31/42 (73%)
 Frame = +2

Query: 2   AKITGHDARPGSAEGVVIVSGTSDQIHAAQSLIHAFILSGQT 127
           A +  HD++PG+ EG+VIVSG  DQ HAAQ LI  FIL GQT
Sbjct: 522 ANVAVHDSKPGATEGLVIVSGAPDQTHAAQCLIQGFILCGQT 563


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