BLASTX nr result

ID: Papaver23_contig00019091 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00019091
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511644.1| ccr4-not transcription complex, putative [Ri...   174   9e-42
ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex su...   159   3e-37
ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|2...   155   2e-36
ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex su...   154   7e-36
ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medi...   154   7e-36

>ref|XP_002511644.1| ccr4-not transcription complex, putative [Ricinus communis]
            gi|223548824|gb|EEF50313.1| ccr4-not transcription
            complex, putative [Ricinus communis]
          Length = 2330

 Score =  174 bits (440), Expect = 9e-42
 Identities = 91/153 (59%), Positives = 109/153 (71%)
 Frame = +1

Query: 4    SNDLEQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPAYFDA 183
            S+ LE AVQ++TNDNLDLGCA +E+AA +KA+QTID EIA QL++RRK RD VGP +FDA
Sbjct: 1341 SDLLEHAVQLATNDNLDLGCAAIEQAATDKAIQTIDAEIAQQLSLRRKHRDGVGPTFFDA 1400

Query: 184  TTYTQGPIGGVPEALRPKPGRLSLSQQRVYEDFVRFPWQNQPNQSSNALPAVQXXXXXXX 363
              Y+QG +G VPEALRPKPG LS+SQQRVYEDFVR PWQNQ  Q S+ +P          
Sbjct: 1401 NLYSQGSMGVVPEALRPKPGHLSVSQQRVYEDFVRLPWQNQSGQGSHTIP---MGSSTSA 1457

Query: 364  XXXXLPRSYGLASGQPNPTLYSSTQGDPGFGSV 462
                L  +YG  SGQ NP  YSS  G+ GF +V
Sbjct: 1458 VSTALAGAYGSGSGQLNPG-YSSAPGNVGFEAV 1489


>ref|XP_003530175.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2424

 Score =  159 bits (401), Expect = 3e-37
 Identities = 85/146 (58%), Positives = 102/146 (69%)
 Frame = +1

Query: 13   LEQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPAYFDATTY 192
            LEQAVQ+ TNDNLDLGCAV+E+AA +KA+ TID EI  QL++RRK R+ +G  +FDA  Y
Sbjct: 1423 LEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLY 1482

Query: 193  TQGPIGGVPEALRPKPGRLSLSQQRVYEDFVRFPWQNQPNQSSNALPAVQXXXXXXXXXX 372
             QG +GGVPE LRPKPG+LSLSQQRVYEDFVR PWQNQ +QSS+++ A            
Sbjct: 1483 PQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSA---GVAVQSGNT 1539

Query: 373  XLPRSYGLASGQPNPTLYSSTQGDPG 450
             L  + G  SGQ NP  Y  T G  G
Sbjct: 1540 GLTGTNGSVSGQINPG-YPVTTGYEG 1564


>ref|XP_002301259.1| predicted protein [Populus trichocarpa] gi|222842985|gb|EEE80532.1|
            predicted protein [Populus trichocarpa]
          Length = 1987

 Score =  155 bits (393), Expect = 2e-36
 Identities = 78/110 (70%), Positives = 90/110 (81%)
 Frame = +1

Query: 4    SNDLEQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPAYFDA 183
            S  LE AVQ+ TNDNLDLGCAV+E+AA +KA+QTID EIA QL +RRK RD VGPA+FDA
Sbjct: 1377 SEILEHAVQLVTNDNLDLGCAVIEQAATDKAIQTIDTEIAQQL-LRRKHRDGVGPAFFDA 1435

Query: 184  TTYTQGPIGGVPEALRPKPGRLSLSQQRVYEDFVRFPWQNQPNQSSNALP 333
              YTQ  +G VPEALRPKPG L+ SQQRVYEDFVR PWQNQ +QSS+ +P
Sbjct: 1436 NMYTQSSMGVVPEALRPKPGHLTPSQQRVYEDFVRLPWQNQSSQSSHVIP 1485


>ref|XP_003521090.1| PREDICTED: CCR4-NOT transcription complex subunit 1-like [Glycine
            max]
          Length = 2327

 Score =  154 bits (389), Expect = 7e-36
 Identities = 82/146 (56%), Positives = 101/146 (69%)
 Frame = +1

Query: 13   LEQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPAYFDATTY 192
            LEQAVQ+ TNDNLDLGCAV+E+AA +KA+ TID EI  QL++RRK R+ +G  +FDA  Y
Sbjct: 1353 LEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTEIGQQLSLRRKHREGMGSTFFDANLY 1412

Query: 193  TQGPIGGVPEALRPKPGRLSLSQQRVYEDFVRFPWQNQPNQSSNALPAVQXXXXXXXXXX 372
             QG +GGVPE LRPKPG+LSLSQQRVYEDFVR PWQ+Q + SS+++ +            
Sbjct: 1413 PQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQSQSSPSSHSMSS----GVAVQSGT 1468

Query: 373  XLPRSYGLASGQPNPTLYSSTQGDPG 450
             L  + G  SGQ NP  Y  T G  G
Sbjct: 1469 GLTGTNGSVSGQSNPG-YPVTTGYEG 1493


>ref|XP_003626683.1| CCR4-NOT transcription complex subunit [Medicago truncatula]
            gi|355520705|gb|AET01159.1| CCR4-NOT transcription
            complex subunit [Medicago truncatula]
          Length = 2410

 Score =  154 bits (389), Expect = 7e-36
 Identities = 83/146 (56%), Positives = 101/146 (69%)
 Frame = +1

Query: 13   LEQAVQISTNDNLDLGCAVVEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGPAYFDATTY 192
            LE AVQ+ TNDNLDLGCAV+E AA +KA+ TID EI+ QL++R+K R+ +G  +FDA  Y
Sbjct: 1409 LEPAVQLVTNDNLDLGCAVIEHAATDKAINTIDTEISQQLSLRKKHREGMGSTFFDANLY 1468

Query: 193  TQGPIGGVPEALRPKPGRLSLSQQRVYEDFVRFPWQNQPNQSSNALPAVQXXXXXXXXXX 372
             QG +GGVPE LRPKPG+LSLSQQRVYEDFVR PWQNQ +QSS+++ A            
Sbjct: 1469 PQGSMGGVPEPLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQSSHSMSA---GAAVQSATS 1525

Query: 373  XLPRSYGLASGQPNPTLYSSTQGDPG 450
             L  + G A GQ NP  YS   G  G
Sbjct: 1526 GLTGTNGPAPGQINPG-YSLNTGYEG 1550


Top