BLASTX nr result

ID: Papaver23_contig00018886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018886
         (1057 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19367.3| unnamed protein product [Vitis vinifera]              369   e-100
ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 hom...   365   8e-99
ref|XP_002522113.1| protein binding protein, putative [Ricinus c...   276   6e-72
ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|2...   276   6e-72
ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 hom...   271   2e-70

>emb|CBI19367.3| unnamed protein product [Vitis vinifera]
          Length = 1030

 Score =  369 bits (947), Expect = e-100
 Identities = 195/313 (62%), Positives = 220/313 (70%), Gaps = 11/313 (3%)
 Frame = +1

Query: 151  MTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSQQFRPVGQ 330
            M +N QSSG QPL PP VGS GP QNFGPP+SMQFRP    QQG PFIP  SQQFRP+GQ
Sbjct: 1    MANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRPAVPGQQGHPFIPAASQQFRPIGQ 59

Query: 331  GMPVPNVG-PSPQNQQLPFPPSMHQLHQRPGQPGHGPQSSQAIQMPFMQQNRPITSESPQ 507
             +  PNVG PS QNQ   F  +M QL  RP QPG    SSQ I MP++QQNRP+TS SPQ
Sbjct: 60   NISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQNRPLTSSSPQ 119

Query: 508  PHQ-----NNQHXXXXXXXXXXXXXYTFAPSPYGQPQNNINASSHYQPISQMHTGVAPAG 672
            P+Q     N+               YTFAP+ +GQPQ+ INAS+ +QPISQMH   AP G
Sbjct: 120  PNQTAPPLNSHMPGLAGPGMPFSSSYTFAPASFGQPQSTINASAQFQPISQMH---APVG 176

Query: 673  GQTWLPSGPVATAM-----QGHQSSATAAAVPATNLQPNPSTQLSSDWQEHTSTDGRRYY 837
            GQ WL SG  + A+     Q  Q  +  A +PA N+ PNP+ Q SSDWQEHTS DGRRYY
Sbjct: 177  GQPWLSSGSQSGALVTPVHQAGQQPSVTADIPAGNV-PNPTHQSSSDWQEHTSADGRRYY 235

Query: 838  YNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKLA 1017
            YNKKT+ SSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKWTIPEELKLA
Sbjct: 236  YNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKWTIPEELKLA 295

Query: 1018 REQAEREASQGVQ 1056
            REQAE+  SQ  Q
Sbjct: 296  REQAEKSVSQETQ 308


>ref|XP_002283496.2| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Vitis
            vinifera]
          Length = 1020

 Score =  365 bits (938), Expect = 8e-99
 Identities = 196/322 (60%), Positives = 219/322 (68%), Gaps = 11/322 (3%)
 Frame = +1

Query: 124  WREACRFEDMTSNSQSSGTQPLWPPIVGSAGPPQNFGPPMSMQFRPVGSQQQGQPFIPPG 303
            + EAC    M +N QSSG QPL PP VGS GP QNFGPP+SMQFRP    QQG PFIP  
Sbjct: 6    FEEACLCAGMANNPQSSGAQPLRPPAVGSMGP-QNFGPPLSMQFRPAVPGQQGHPFIPAA 64

Query: 304  SQQFRPVGQGMPVPNVG-PSPQNQQLPFPPSMHQLHQRPGQPGHGPQSSQAIQMPFMQQN 480
            SQQFRP+GQ +  PNVG PS QNQ   F  +M QL  RP QPG    SSQ I MP++QQN
Sbjct: 65   SQQFRPIGQNISSPNVGGPSGQNQPPQFSQAMQQLPPRPNQPGPIAPSSQPIPMPYIQQN 124

Query: 481  RPITSESPQPHQN----NQHXXXXXXXXXXXXXYTFAPSPYGQPQNNINASSHYQPISQM 648
            RP+TS SPQP+Q     N H               FAP+ +GQPQ+ INAS+ +QPISQM
Sbjct: 125  RPLTSSSPQPNQTAPPLNSHMPGL-----------FAPASFGQPQSTINASAQFQPISQM 173

Query: 649  HTGVAPAGGQTWLPSGPVATAM------QGHQSSATAAAVPATNLQPNPSTQLSSDWQEH 810
            H   AP GGQ WL SG  + A+       G Q S TA    +    PNP+ Q SSDWQEH
Sbjct: 174  H---APVGGQPWLSSGSQSGALVTPVHQAGQQPSVTADIPVSAGNVPNPTHQSSSDWQEH 230

Query: 811  TSTDGRRYYYNKKTKQSSWEKPVELMTPIERADASTDWKEFTNSDGRKYYYNKVTKLSKW 990
            TS DGRRYYYNKKT+ SSWEKP+ELMTPIERADAST WKEFT  +GRKYYYNKVTK SKW
Sbjct: 231  TSADGRRYYYNKKTRLSSWEKPLELMTPIERADASTVWKEFTTPEGRKYYYNKVTKQSKW 290

Query: 991  TIPEELKLAREQAEREASQGVQ 1056
            TIPEELKLAREQAE+  SQ  Q
Sbjct: 291  TIPEELKLAREQAEKSVSQETQ 312


>ref|XP_002522113.1| protein binding protein, putative [Ricinus communis]
            gi|223538712|gb|EEF40313.1| protein binding protein,
            putative [Ricinus communis]
          Length = 956

 Score =  276 bits (706), Expect = 6e-72
 Identities = 148/286 (51%), Positives = 173/286 (60%), Gaps = 13/286 (4%)
 Frame = +1

Query: 217  PPQNFGPPMSMQFRPVGSQQQGQPFIPPGSQQFRPVGQGMPVPNVGPSPQNQQLPFPPSM 396
            PP+NF PPM MQFRPV   QQ Q FIP  S  F+PVG+G+P+ N G   Q  Q  FPPS+
Sbjct: 3    PPRNFVPPMPMQFRPVVPAQQSQQFIPVASPHFQPVGRGVPLMNAGLPSQPPQSQFPPSV 62

Query: 397  HQLHQRPGQPGHGPQSSQAIQMPFMQQNRPITSESPQPHQN-----NQHXXXXXXXXXXX 561
             Q   RPGQPGHGP  SQ I +P  Q NR +TS S  P  +     N             
Sbjct: 63   QQFPSRPGQPGHGPPPSQVISLPNAQANRHVTSGSSLPPPSVPTSINYAPGLGGPGAPLS 122

Query: 562  XXYTFAPSPYGQPQNNINASSHYQPISQMHTGVAPAGG--------QTWLPSGPVATAMQ 717
              YTF PS YGQP    N  S YQPISQM     PAGG        Q+  P  P+   + 
Sbjct: 123  SSYTFVPSSYGQPPVAANTVSQYQPISQMRPPSIPAGGLAGSSSVNQSITPVTPMQ--LN 180

Query: 718  GHQSSATAAAVPATNLQPNPSTQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMTPI 897
            G QSS T    P       P+ + + DW+EH + +GRRYYYNK+T+QSSWEKP ELMTPI
Sbjct: 181  GEQSSVTNDLHPT-----KPNEETTMDWKEHLAANGRRYYYNKRTRQSSWEKPFELMTPI 235

Query: 898  ERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKLAREQAER 1035
            ERADASTDWKEF + +GR YYYNK TK SKW IPEELKLAR++ E+
Sbjct: 236  ERADASTDWKEFASPEGRTYYYNKTTKQSKWEIPEELKLARKRLEK 281


>ref|XP_002320019.1| predicted protein [Populus trichocarpa] gi|222860792|gb|EEE98334.1|
            predicted protein [Populus trichocarpa]
          Length = 1019

 Score =  276 bits (706), Expect = 6e-72
 Identities = 155/295 (52%), Positives = 188/295 (63%), Gaps = 13/295 (4%)
 Frame = +1

Query: 211  AGPPQNFGPPMSMQFRPVGSQQQGQPFIPPGSQQFRPVGQGMPVPNVG-PSPQNQQLPFP 387
            A  PQ+ G     QFRP+   QQGQPFI   SQQFRPVGQGMP  +VG P+ Q+Q L F 
Sbjct: 2    ASNPQSSGG----QFRPMVPTQQGQPFIQVASQQFRPVGQGMPSSHVGMPAVQSQHLQFS 57

Query: 388  PSMHQLHQRPGQPGHGPQSSQAIQMPFMQQNRPITSESPQ---PHQNNQHXXXXXXXXXX 558
              + QL   P QPG    S+QA+ MP+ Q NRP+TS  PQ   P  +N            
Sbjct: 58   QPIQQLPPWPNQPG--APSAQALSMPYGQLNRPLTSSQPQQNAPPLSNHMHVVGTSGVPN 115

Query: 559  XXXYTFAPSPYGQPQNNINASSHYQPISQMHTGVAPAGGQTWLPSG--------PVA-TA 711
               Y FAPS +G  QN+ +A   + P+SQMH  V P GGQ WL SG        PV  T 
Sbjct: 116  SSPYAFAPSSFGLTQNSASALPQFPPMSQMHAHVVPMGGQPWLSSGSHGASLVPPVQPTV 175

Query: 712  MQGHQSSATAAAVPATNLQPNPSTQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMT 891
            +Q   SS++ + V  ++     S Q  SDWQEHT++DGRRYYYN++TKQSSW+KP ELMT
Sbjct: 176  VQPSISSSSDSTVAVSS----NSQQSLSDWQEHTASDGRRYYYNRRTKQSSWDKPFELMT 231

Query: 892  PIERADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKLAREQAEREASQGVQ 1056
            PIERADAST WKEFT  +G+KYYYNKVTK SKW+IPEELK+AREQA++   QG Q
Sbjct: 232  PIERADASTVWKEFTTQEGKKYYYNKVTKQSKWSIPEELKMAREQAQQTVGQGNQ 286


>ref|XP_003545351.1| PREDICTED: pre-mRNA-processing factor 40 homolog B-like [Glycine max]
          Length = 1002

 Score =  271 bits (693), Expect = 2e-70
 Identities = 158/291 (54%), Positives = 182/291 (62%), Gaps = 14/291 (4%)
 Frame = +1

Query: 226  NFGPPMSMQFRPVGSQQQGQPFIPPGSQQFRPVGQGMPVPNVG-PSPQNQQLPFPPSMHQ 402
            N   P SMQFRPV   QQGQPF+P  SQQF P G  +P  N G P  Q QQL +   M Q
Sbjct: 3    NNSQPSSMQFRPVTQAQQGQPFVPMNSQQFGPAGHAIPSSNAGMPVIQGQQLQYSQPMQQ 62

Query: 403  LHQRPGQPGHGPQSSQAIQMPFMQQNRPITSESPQPHQN----NQHXXXXXXXXXXXXXY 570
            L QRP QPGH   SSQAI M ++Q NRP+TS  P   QN    + H              
Sbjct: 63   LTQRPMQPGHPAPSSQAIPMQYIQTNRPLTSIPPHSQQNVPPLSNHMPGLAVSVAAPHSS 122

Query: 571  TFAPSPYGQPQNNINASSHYQPISQMHTGVAPAGGQTWLPSGP----VATAMQ--GHQSS 732
             F  S YGQ Q+N NA + YQ   QM    AP  GQ W  S        T++Q  G QSS
Sbjct: 123  YFTLS-YGQQQDNANALAQYQHPPQMF---APPSGQPWPSSASQSAVAVTSVQPAGVQSS 178

Query: 733  ---ATAAAVPATNLQPNPSTQLSSDWQEHTSTDGRRYYYNKKTKQSSWEKPVELMTPIER 903
               +T A + ATN Q        SDWQEHTS DGRRYYYNK+T+QSSWEKP+ELM+PIER
Sbjct: 179  GATSTDAVINATNQQS------LSDWQEHTSADGRRYYYNKRTRQSSWEKPLELMSPIER 232

Query: 904  ADASTDWKEFTNSDGRKYYYNKVTKLSKWTIPEELKLAREQAEREASQGVQ 1056
            ADAST WKEFT+S+GRKYYYNKVT+ S W+IPEELKLAREQA+  A+QG+Q
Sbjct: 233  ADASTVWKEFTSSEGRKYYYNKVTQQSTWSIPEELKLAREQAQNAANQGMQ 283


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