BLASTX nr result

ID: Papaver23_contig00018742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018742
         (1111 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    76   7e-17
ref|NP_566322.1| F-box protein [Arabidopsis thaliana] gi|7526578...    74   2e-16
ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    78   2e-16
ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata sub...    72   9e-16
ref|XP_002532277.1| conserved hypothetical protein [Ricinus comm...    68   2e-13

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 75.9 bits (185), Expect(2) = 7e-17
 Identities = 56/163 (34%), Positives = 78/163 (47%), Gaps = 14/163 (8%)
 Frame = +1

Query: 100 FGDYVFYETKKIDIK-FPLDVSGF------VGSCNGLICLSVNMEYDSIWHHEEPNEPLY 258
           F D+  +E +K  +K  P   S        VGSCNGL+CLS     DS++     N+ LY
Sbjct: 95  FVDFAAHEEEKEKVKRIPAPFSSMMPEFEVVGSCNGLLCLS-----DSLY-----NDSLY 144

Query: 259 IWNPITREIVTLPPIANKNLISLVHEFGYHPLTKEYKVVRISYRSKSMDAPPRK------ 420
           I+NP T     LP         +V  FG++P TKEYKV+RI Y        PR       
Sbjct: 145 IYNPFTGCYKELPKSLQYPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYP 204

Query: 421 -GKVEVYTVGSGSGWRNVAEVDYLIEPSGENMNNCVNGALHWL 546
             +V++ T+G    WR++ +V Y +          VNG LHW+
Sbjct: 205 LSEVQILTLGCPE-WRSLGKVSYRLVRRASGA--LVNGRLHWI 244



 Score = 38.5 bits (88), Expect(2) = 7e-17
 Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 11/164 (6%)
 Frame = +2

Query: 563  IVAFDLEDEEFHLVHTPP--GLSHDSNKALSSRIFVMRGCLCLAYEYEFYG--DLWMLKK 730
            +V+FDL DE+F  V  P   GL+       +  + V+RGCL  A  Y  YG  ++W++K+
Sbjct: 256  LVSFDLTDEQFREVSKPDCGGLNR-----CNYHLVVLRGCLSAAV-YCNYGRLEIWVMKE 309

Query: 731  ---QENAVTSEFYNAKDQYYKSRKWSKEIEIPYEGLNHTFKIFG---LTKEGAAILKHED 892
               +E+ V    YN      K  K +++ ++     +   ++ G   + K G  +L++++
Sbjct: 310  YNVKESWVKE--YNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKN 367

Query: 893  GSMTLYHPKFNARVGDSTFIQLISHINSFVSLKALGEVN-VATP 1021
              +  Y PK N +  D   I+L    N F ++  +G +N + TP
Sbjct: 368  RVLVSYDPK-NGKFKD---IELQGAPNWFQTVVHVGSLNWIDTP 407


>ref|NP_566322.1| F-box protein [Arabidopsis thaliana]
           gi|75265789|sp|Q9SFC7.1|FB135_ARATH RecName: Full=F-box
           protein At3g07870 gi|6648199|gb|AAF21197.1|AC013483_21
           unknown protein [Arabidopsis thaliana]
           gi|15983479|gb|AAL11607.1|AF424614_1 AT3g07870/F17A17_21
           [Arabidopsis thaliana] gi|109134141|gb|ABG25068.1|
           At3g07870 [Arabidopsis thaliana]
           gi|332641092|gb|AEE74613.1| F-box protein [Arabidopsis
           thaliana]
          Length = 417

 Score = 73.9 bits (180), Expect(2) = 2e-16
 Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 20/162 (12%)
 Frame = +1

Query: 121 ETKKIDIKFPLDVSGF--VGSCNGLICLSVNMEYDSIWHHEEPNEPLYIWNPITREIVTL 294
           +TKK  ++F   +  F  VGSCNGL+CLS     DS++     N+ LY++NP T   + L
Sbjct: 102 KTKKFTLRFASSMPEFDVVGSCNGLLCLS-----DSLY-----NDSLYLYNPFTTNSLEL 151

Query: 295 PPIANK-NLISLVHEFGYHPLTKEYKVVRISY-RSKSMD----------APPRKGKVEVY 438
           P  +NK +   LV  FG+H +TKEYKV++I Y R  S +             ++ +V++ 
Sbjct: 152 PECSNKYHDQELVFGFGFHEMTKEYKVLKIVYFRGSSSNNNGIYRGRGRIQYKQSEVQIL 211

Query: 439 TVGSGS-----GWRNVAEVDY-LIEPSGENMNNCVNGALHWL 546
           T+ S +      WR++ +  Y  ++ S E +   VNG LH++
Sbjct: 212 TLSSKTTDQSLSWRSLGKAPYKFVKRSSEAL---VNGRLHFV 250



 Score = 38.5 bits (88), Expect(2) = 2e-16
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
 Frame = +2

Query: 560 EIVAFDLEDEEFHLVHTPP--GLSHDSNKALSSRIFVMRGCLCLAYEYEFYG--DLWMLK 727
           + V+FDLEDEEF  +  P   GL+  ++     R+  ++GCLC A  Y  YG  D+W++K
Sbjct: 261 KFVSFDLEDEEFKEIPKPDCGGLNRTNH-----RLVNLKGCLC-AVVYGNYGKLDIWVMK 314

Query: 728 KQENAVTSEFYNAKDQYYKSRKWSKEIEIPY---EGLNHTF----------------KIF 850
                     Y  K+       W KE  I     +GL                    ++ 
Sbjct: 315 T---------YGVKE------SWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVL 359

Query: 851 GLTKEGAAILKHEDGSMTLYHPK 919
            L + G  +L+++   +  Y PK
Sbjct: 360 CLLENGEILLEYKSRVLVAYDPK 382


>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
           gi|222843314|gb|EEE80861.1| f-box family protein
           [Populus trichocarpa]
          Length = 408

 Score = 78.2 bits (191), Expect(2) = 2e-16
 Identities = 58/164 (35%), Positives = 83/164 (50%), Gaps = 15/164 (9%)
 Frame = +1

Query: 100 FGDYVFYETKKIDIK-----FPLDVSGF--VGSCNGLICLSVNMEYDSIWHHEEPNEPLY 258
           F D+  +E +K  +K     F   +  F  VGSCNGL+CLS     DS++     N+ LY
Sbjct: 94  FVDFAAHEEEKEKVKRIRAPFSSMMPEFEVVGSCNGLLCLS-----DSLF-----NDSLY 143

Query: 259 IWNPITREIVTLPPIANKNLISLVHEFGYHPLTKEYKVVRISYRSKSMDAPPRK------ 420
           I+NP T     LP         +V  FG++P T EYKV+RI Y        PR       
Sbjct: 144 IYNPFTGRYKELPKSLQYPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYP 203

Query: 421 -GKVEVYTVGSGSGWRNVAEVDY-LIEPSGENMNNCVNGALHWL 546
             +V++ T+G   GWR++ +V Y L+  + E +   VNG LHW+
Sbjct: 204 LSQVQILTLGC-PGWRSLGKVSYRLVRRASETL---VNGRLHWV 243



 Score = 34.3 bits (77), Expect(2) = 2e-16
 Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
 Frame = +2

Query: 563 IVAFDLEDEEFHLVHTPP--GLSHDSNKALSSRIFVMRGCLCLAYEYEFYG--DLWMLKK 730
           +V+FDL DE+F  V  P   GL+          + V+RGCL +A  Y  YG  ++W++K+
Sbjct: 255 LVSFDLTDEQFREVPKPDCGGLNR-----CDYHLAVLRGCLSVAV-YCNYGRLEIWVMKE 308

Query: 731 QENAVTSEFYNAKDQYYK------------SRKWSKEIEIPYEGLN-HTFKIFGLTKEGA 871
                    YN K+ + K             +   + ++I     N    +   + K G 
Sbjct: 309 ---------YNVKESWVKEYNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGE 359

Query: 872 AILKHEDGSMTLYHPK 919
            +L++++ ++  Y PK
Sbjct: 360 ILLEYKNRALVSYDPK 375


>ref|XP_002882554.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328394|gb|EFH58813.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 415

 Score = 72.4 bits (176), Expect(2) = 9e-16
 Identities = 53/162 (32%), Positives = 87/162 (53%), Gaps = 20/162 (12%)
 Frame = +1

Query: 121 ETKKIDIKFPLDVSGF--VGSCNGLICLSVNMEYDSIWHHEEPNEPLYIWNPITREIVTL 294
           +TKK  ++F   +  F  VGSCNGL+CLS     DS++     N+ LY++NP T   + L
Sbjct: 100 KTKKFTLRFESSMPEFDVVGSCNGLLCLS-----DSLY-----NDSLYLYNPFTTNSLEL 149

Query: 295 PPIANK-NLISLVHEFGYHPLTKEYKVVRISYRSKSMDA-----------PPRKGKVEVY 438
           P  +NK +   LV  FG+H +TK+YKV++I Y   S  +             ++ +V++ 
Sbjct: 150 PECSNKYHDQELVFGFGFHEMTKDYKVLKIVYFRGSSSSNNGIYRGRGRIQYKQSEVQIL 209

Query: 439 TVGSGS-----GWRNVAEVDY-LIEPSGENMNNCVNGALHWL 546
           T+ S +      WR++ +  Y  ++ S E +   VNG LH++
Sbjct: 210 TLSSKTTDQSLSWRSLGKAPYKFMKRSSEAL---VNGRLHFV 248



 Score = 38.1 bits (87), Expect(2) = 9e-16
 Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
 Frame = +2

Query: 560 EIVAFDLEDEEFHLVHTPP--GLSHDSNKALSSRIFVMRGCLCLAYEYEFYG--DLWMLK 727
           + V+FDLEDEEF  +  P   GL+  ++     R+  ++GCLC A  Y  YG  D+W++ 
Sbjct: 259 KFVSFDLEDEEFKEIPKPDCGGLNRTNH-----RLVNLKGCLC-AVVYGNYGKLDIWVM- 311

Query: 728 KQENAVTSEFYNAKDQYYKSRKWSKEIEIPY---EGLNHTF----------------KIF 850
                   E Y  K+       W KE  I     +GL                    ++ 
Sbjct: 312 --------ETYGVKE------SWGKEYSIGTYLPKGLKQNLDRPMWIWKNAENGKVVRVL 357

Query: 851 GLTKEGAAILKHEDGSMTLYHPK 919
            L + G  +L+++   +  Y PK
Sbjct: 358 CLLENGEILLEYKSRVLVAYDPK 380


>ref|XP_002532277.1| conserved hypothetical protein [Ricinus communis]
           gi|223528011|gb|EEF30092.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 410

 Score = 67.8 bits (164), Expect(2) = 2e-13
 Identities = 49/137 (35%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
 Frame = +1

Query: 169 VGSCNGLICLSVNMEYDSIWHHEEPNEPLYIWNPITREIVTLP-PIANKNLISLVHEFGY 345
           +GSCNGL+ L      DS+          YI+NP T + + LP P    N   +   FG+
Sbjct: 120 IGSCNGLLYL-----LDSLQQRAN-----YIYNPFTSDYLELPEPGQVLNQHRVATGFGF 169

Query: 346 HPLTKEYKVVRISYRSKSMDAPPR---------KGKVEVYTVGSGS-GWRNVAEVDYLIE 495
           H  TKEYKVVR+ Y   + +             + +V+V TVG+GS  WR+  E  Y + 
Sbjct: 170 HSTTKEYKVVRVVYYRNNKEEGTNFQKRRYSLPRSEVQVLTVGNGSLTWRSKGETSYQL- 228

Query: 496 PSGENMNNCVNGALHWL 546
             G   +  VNG LHWL
Sbjct: 229 -LGNPSHVVVNGRLHWL 244



 Score = 34.7 bits (78), Expect(2) = 2e-13
 Identities = 38/162 (23%), Positives = 66/162 (40%), Gaps = 13/162 (8%)
 Frame = +2

Query: 563  IVAFDLEDEEFHLVHTPPGLSHDSNKALSSRIFVMRGCLCLAYEYEFYGDLWMLKKQENA 742
            +++FDL DE+F  V  P G S   +    S +  +RGCL    +      +W++K+    
Sbjct: 256  LISFDLADEQFREVPCPVGASFGRH---CSHLATLRGCLSGVVQGFRRLYIWVMKE---- 308

Query: 743  VTSEFYNAKDQYYK----SRKWSKEIE-IPYEGLN--------HTFKIFGLTKEGAAILK 883
                 Y  K+ + K      K  +E+E  P + +N           K+  L   G  +L+
Sbjct: 309  -----YGVKESWVKEFTIGVKLPRELEPYPNQSINLQEFHLPLSQTKVLCLLNNGEILLE 363

Query: 884  HEDGSMTLYHPKFNARVGDSTFIQLISHINSFVSLKALGEVN 1009
               G++  Y  K  A      F  L    N+ V + +L  ++
Sbjct: 364  FRCGTLVCYDTKSGAFKELIIFQDLPEWSNAIVHVGSLNWID 405


Top