BLASTX nr result

ID: Papaver23_contig00018459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018459
         (791 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_191027.3| structural maintenance of chromosomes 1 [Arabid...   167   2e-39
emb|CAB77587.1| structural maintenance of chromosomes (SMC)-like...   167   2e-39
ref|NP_001030859.1| structural maintenance of chromosomes 1 [Ara...   166   4e-39
ref|NP_001190092.1| structural maintenance of chromosomes 1 [Ara...   166   4e-39
ref|XP_002876263.1| hypothetical protein ARALYDRAFT_323999 [Arab...   166   4e-39

>ref|NP_191027.3| structural maintenance of chromosomes 1 [Arabidopsis thaliana]
            gi|332645742|gb|AEE79263.1| structural maintenance of
            chromosomes 1 [Arabidopsis thaliana]
          Length = 1238

 Score =  167 bits (423), Expect = 2e-39
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +2

Query: 290  RYELFIEAFNHISNNIDKIYKQLTKSSTHQLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 469
            RYELF+EAFNHI++NIDKIYKQLTKS+TH LGGTAYLNLENEDDPFLHGIKYTTMPPTKR
Sbjct: 1065 RYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 1124

Query: 470  FRDMEQLSGGEKTVAALALLFSIHR 544
            FRDMEQLSGGEKTVAALALLFSIHR
Sbjct: 1125 FRDMEQLSGGEKTVAALALLFSIHR 1149


>emb|CAB77587.1| structural maintenance of chromosomes (SMC)-like protein [Arabidopsis
            thaliana]
          Length = 1265

 Score =  167 bits (423), Expect = 2e-39
 Identities = 80/85 (94%), Positives = 84/85 (98%)
 Frame = +2

Query: 290  RYELFIEAFNHISNNIDKIYKQLTKSSTHQLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 469
            RYELF+EAFNHI++NIDKIYKQLTKS+TH LGGTAYLNLENEDDPFLHGIKYTTMPPTKR
Sbjct: 1092 RYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 1151

Query: 470  FRDMEQLSGGEKTVAALALLFSIHR 544
            FRDMEQLSGGEKTVAALALLFSIHR
Sbjct: 1152 FRDMEQLSGGEKTVAALALLFSIHR 1176


>ref|NP_001030859.1| structural maintenance of chromosomes 1 [Arabidopsis thaliana]
           gi|332645743|gb|AEE79264.1| structural maintenance of
           chromosomes 1 [Arabidopsis thaliana]
          Length = 453

 Score =  166 bits (421), Expect = 4e-39
 Identities = 79/87 (90%), Positives = 85/87 (97%)
 Frame = +2

Query: 290 RYELFIEAFNHISNNIDKIYKQLTKSSTHQLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 469
           RYELF+EAFNHI++NIDKIYKQLTKS+TH LGGTAYLNLENEDDPFLHGIKYTTMPPTKR
Sbjct: 278 RYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 337

Query: 470 FRDMEQLSGGEKTVAALALLFSIHRWK 550
           FRDMEQLSGGEKTVAALALLFSIH ++
Sbjct: 338 FRDMEQLSGGEKTVAALALLFSIHSYR 364


>ref|NP_001190092.1| structural maintenance of chromosomes 1 [Arabidopsis thaliana]
            gi|332645744|gb|AEE79265.1| structural maintenance of
            chromosomes 1 [Arabidopsis thaliana]
          Length = 1239

 Score =  166 bits (421), Expect = 4e-39
 Identities = 79/87 (90%), Positives = 85/87 (97%)
 Frame = +2

Query: 290  RYELFIEAFNHISNNIDKIYKQLTKSSTHQLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 469
            RYELF+EAFNHI++NIDKIYKQLTKS+TH LGGTAYLNLENEDDPFLHGIKYTTMPPTKR
Sbjct: 1064 RYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 1123

Query: 470  FRDMEQLSGGEKTVAALALLFSIHRWK 550
            FRDMEQLSGGEKTVAALALLFSIH ++
Sbjct: 1124 FRDMEQLSGGEKTVAALALLFSIHSYR 1150


>ref|XP_002876263.1| hypothetical protein ARALYDRAFT_323999 [Arabidopsis lyrata subsp.
            lyrata] gi|297322101|gb|EFH52522.1| hypothetical protein
            ARALYDRAFT_323999 [Arabidopsis lyrata subsp. lyrata]
          Length = 1257

 Score =  166 bits (421), Expect = 4e-39
 Identities = 79/87 (90%), Positives = 85/87 (97%)
 Frame = +2

Query: 290  RYELFIEAFNHISNNIDKIYKQLTKSSTHQLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 469
            RYELF+EAFNHI++NIDKIYKQLTKS+TH LGGTAYLNLENEDDPFLHGIKYTTMPPTKR
Sbjct: 1082 RYELFMEAFNHIASNIDKIYKQLTKSNTHPLGGTAYLNLENEDDPFLHGIKYTTMPPTKR 1141

Query: 470  FRDMEQLSGGEKTVAALALLFSIHRWK 550
            FRDMEQLSGGEKTVAALALLFSIH ++
Sbjct: 1142 FRDMEQLSGGEKTVAALALLFSIHSYR 1168


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