BLASTX nr result

ID: Papaver23_contig00018299 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018299
         (977 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|2...   261   1e-67
ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [...   261   2e-67
ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 ...   260   4e-67
ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 ...   260   4e-67
ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 ...   259   7e-67

>ref|XP_002328026.1| predicted protein [Populus trichocarpa] gi|222837435|gb|EEE75814.1|
           predicted protein [Populus trichocarpa]
          Length = 1181

 Score =  261 bits (668), Expect = 1e-67
 Identities = 139/252 (55%), Positives = 172/252 (68%), Gaps = 8/252 (3%)
 Frame = -1

Query: 977 TIRTGQKRRRLQFVECPDDINGMIDAAKYADIVLLLVDASYGFEAETFEFLSLLRVHGLP 798
           TI +G K+RR+QFVECP+DINGMIDAAK+AD+ LLL+D SYGFE ETFEFL++L+VHG P
Sbjct: 120 TIVSG-KKRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFP 178

Query: 797 KVMGVLTHLDHFKDDKELTETIQRLQGHFQTEIGEGATTFQLSGLNDFELYKTLEVQKLA 618
           K+MGVLTHLD FKD K+L +T QRL+  F TEI +GA  F LSGL   + Y   E+  LA
Sbjct: 179 KIMGVLTHLDQFKDVKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGK-YVKREIHNLA 237

Query: 617 EAISMLRLRTPSWRVEHPYVLVDRFEDVTPPEKLHKDANCKRNISLYGYLRGCNLKSRAK 438
             IS+++    SWR  HPYVL DRFEDVTPPE++  D  C RNI+LYGYLRGCNLK   K
Sbjct: 238 RFISVMKFHPLSWRTSHPYVLADRFEDVTPPERVRVDNKCDRNITLYGYLRGCNLKRGTK 297

Query: 437 VHLAGVGDFRLYGVRSTADPVPLSSE------MEMENDFFEPVHRRKKRL--KTGTYLRL 282
           VH+AGVGD+ L GV + ADP PL S        + E  F+ P+      +  K   Y+ +
Sbjct: 298 VHIAGVGDYNLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLVYDKDAVYINI 357

Query: 281 EVHNVPFGMVKN 246
             H V +  V N
Sbjct: 358 NDHFVQYSNVDN 369



 Score =  150 bits (379), Expect = 4e-34
 Identities = 68/114 (59%), Positives = 86/114 (75%)
 Frame = -1

Query: 347  NDFFEPVHRRKKRLKTGTYLRLEVHNVPFGMVKNFDPCHPILVGGISLEEENVGYMQARL 168
            ND  E      +  +TGTYLRLE+H+VPF MV++FDPC PILVGGI L EE+VGYMQARL
Sbjct: 764  NDLDEETRLEIEGFQTGTYLRLELHDVPFEMVEHFDPCDPILVGGIGLGEEHVGYMQARL 823

Query: 167  KRHNWHMKLLKSEDPVTVSAGWRRYQTIPIFAMHLDSKQHEIAKYIPQYEHCLA 6
            KRH WH K+LK++DPV  S GWRRYQT P++A+   + +H + KY P++ HCLA
Sbjct: 824  KRHRWHRKVLKTKDPVIFSIGWRRYQTTPVYAIEDRNGRHRMLKYTPEHMHCLA 877


>ref|XP_002517309.1| ribosome biogenesis protein bms1, putative [Ricinus communis]
           gi|223543572|gb|EEF45102.1| ribosome biogenesis protein
           bms1, putative [Ricinus communis]
          Length = 825

 Score =  261 bits (666), Expect = 2e-67
 Identities = 140/250 (56%), Positives = 172/250 (68%), Gaps = 8/250 (3%)
 Frame = -1

Query: 977 TIRTGQKRRRLQFVECPDDINGMIDAAKYADIVLLLVDASYGFEAETFEFLSLLRVHGLP 798
           TI +G K+RR+QFVECP+DINGMIDAAK+AD+ LLL+D SYGFE ETFEFL++L+VHG P
Sbjct: 123 TIVSG-KQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFP 181

Query: 797 KVMGVLTHLDHFKDDKELTETIQRLQGHFQTEIGEGATTFQLSGLNDFELYKTLEVQKLA 618
           KVMGVLTHLD FKD K+L +T QRL+  F TEI +GA  F LSGL   + Y   E+  LA
Sbjct: 182 KVMGVLTHLDKFKDVKKLRKTKQRLKHRFWTEIYDGAKLFYLSGLIHGK-YPRREIHNLA 240

Query: 617 EAISMLRLRTPSWRVEHPYVLVDRFEDVTPPEKLHKDANCKRNISLYGYLRGCNLKSRAK 438
             IS+++    SWR  HPYVLVDRFEDVTPPE++H +    RN++LYGYLRGCNLK   K
Sbjct: 241 RFISVMKFHPLSWRTSHPYVLVDRFEDVTPPEQVHMNRKSDRNVTLYGYLRGCNLKKGTK 300

Query: 437 VHLAGVGDFRLYGVRSTADPVPLSSE------MEMENDFFEPVHRRKKRL--KTGTYLRL 282
           VH+AGVGD+ L GV + ADP PL S        + E  F+ P+      L  K   Y+ +
Sbjct: 301 VHIAGVGDYSLAGVTALADPCPLPSAAKKKGLRDKEKLFYAPMSGVGDLLYDKDAVYINI 360

Query: 281 EVHNVPFGMV 252
             H V F  V
Sbjct: 361 NDHFVQFSKV 370



 Score =  137 bits (344), Expect = 5e-30
 Identities = 61/93 (65%), Positives = 73/93 (78%)
 Frame = -1

Query: 347  NDFFEPVHRRKKRLKTGTYLRLEVHNVPFGMVKNFDPCHPILVGGISLEEENVGYMQARL 168
            ND  E      +  +TGTY+RLEVH+VPF MV++FDPCHPILVGGI   EENVGYMQARL
Sbjct: 723  NDLDEVTRLEIEGFQTGTYVRLEVHDVPFEMVEHFDPCHPILVGGIGFGEENVGYMQARL 782

Query: 167  KRHNWHMKLLKSEDPVTVSAGWRRYQTIPIFAM 69
            KRH WH K+LK+ DP+ VS GWRRYQT P++A+
Sbjct: 783  KRHRWHRKVLKTRDPIIVSIGWRRYQTTPVYAI 815


>ref|XP_004168014.1| PREDICTED: ribosome biogenesis protein BMS1 homolog, partial
           [Cucumis sativus]
          Length = 532

 Score =  260 bits (664), Expect = 4e-67
 Identities = 141/250 (56%), Positives = 171/250 (68%), Gaps = 8/250 (3%)
 Frame = -1

Query: 977 TIRTGQKRRRLQFVECPDDINGMIDAAKYADIVLLLVDASYGFEAETFEFLSLLRVHGLP 798
           TI +G K+RRLQFVECP++INGMIDAAK+AD+ LLL+D +YGFE ETFEFL++L  HGLP
Sbjct: 124 TIVSG-KQRRLQFVECPNEINGMIDAAKFADLTLLLIDGAYGFEMETFEFLNILHNHGLP 182

Query: 797 KVMGVLTHLDHFKDDKELTETIQRLQGHFQTEIGEGATTFQLSGLNDFELYKTLEVQKLA 618
           KVMGVLTHLD FKD K+L +T QRL+  F TEI  GA  F LSGL   + Y   EV  LA
Sbjct: 183 KVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIRTGAKLFYLSGLVHGK-YPKREVHNLA 241

Query: 617 EAISMLRLRTPSWRVEHPYVLVDRFEDVTPPEKLHKDANCKRNISLYGYLRGCNLKSRAK 438
             IS+++ +  SWR  HPYVLVDRFEDVTPPE++H +  C RNI+LYGYLRGCNLK   K
Sbjct: 242 RFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVHTNNKCDRNITLYGYLRGCNLKYGTK 301

Query: 437 VHLAGVGDFRLYGVRSTADPVPLSSE------MEMENDFFEPVHRRKKRL--KTGTYLRL 282
           VH+AGVGDF L  V + ADP PL S        + E  F+ P+      L  K   Y+ +
Sbjct: 302 VHIAGVGDFELASVTNLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYINI 361

Query: 281 EVHNVPFGMV 252
             H V +  V
Sbjct: 362 NDHFVQYSKV 371


>ref|XP_004139860.1| PREDICTED: ribosome biogenesis protein BMS1 homolog [Cucumis
           sativus]
          Length = 1198

 Score =  260 bits (664), Expect = 4e-67
 Identities = 141/250 (56%), Positives = 171/250 (68%), Gaps = 8/250 (3%)
 Frame = -1

Query: 977 TIRTGQKRRRLQFVECPDDINGMIDAAKYADIVLLLVDASYGFEAETFEFLSLLRVHGLP 798
           TI +G K+RRLQFVECP++INGMIDAAK+AD+ LLL+D +YGFE ETFEFL++L  HGLP
Sbjct: 124 TIVSG-KQRRLQFVECPNEINGMIDAAKFADLTLLLIDGAYGFEMETFEFLNILHNHGLP 182

Query: 797 KVMGVLTHLDHFKDDKELTETIQRLQGHFQTEIGEGATTFQLSGLNDFELYKTLEVQKLA 618
           KVMGVLTHLD FKD K+L +T QRL+  F TEI  GA  F LSGL   + Y   EV  LA
Sbjct: 183 KVMGVLTHLDKFKDAKKLRKTKQRLKHRFWTEIRTGAKLFYLSGLVHGK-YPKREVHNLA 241

Query: 617 EAISMLRLRTPSWRVEHPYVLVDRFEDVTPPEKLHKDANCKRNISLYGYLRGCNLKSRAK 438
             IS+++ +  SWR  HPYVLVDRFEDVTPPE++H +  C RNI+LYGYLRGCNLK   K
Sbjct: 242 RFISVMKFQPLSWRTNHPYVLVDRFEDVTPPERVHTNNKCDRNITLYGYLRGCNLKYGTK 301

Query: 437 VHLAGVGDFRLYGVRSTADPVPLSSE------MEMENDFFEPVHRRKKRL--KTGTYLRL 282
           VH+AGVGDF L  V + ADP PL S        + E  F+ P+      L  K   Y+ +
Sbjct: 302 VHIAGVGDFELASVTNLADPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYINI 361

Query: 281 EVHNVPFGMV 252
             H V +  V
Sbjct: 362 NDHFVQYSKV 371



 Score =  130 bits (327), Expect = 5e-28
 Identities = 56/101 (55%), Positives = 76/101 (75%)
 Frame = -1

Query: 305  KTGTYLRLEVHNVPFGMVKNFDPCHPILVGGISLEEENVGYMQARLKRHNWHMKLLKSED 126
            ++GTY+RLEVH V   MV++FDPC PILVGGI   E++ GYMQ RLKRH W+ K+LK+ D
Sbjct: 795  QSGTYVRLEVHGVSCEMVEHFDPCQPILVGGIGPGEDDAGYMQVRLKRHRWYKKVLKTRD 854

Query: 125  PVTVSAGWRRYQTIPIFAMHLDSKQHEIAKYIPQYEHCLAM 3
            P+  S GWRRYQ+ P++A+   + +H + KY P++ HCLAM
Sbjct: 855  PLIFSIGWRRYQSTPVYAIEDSNGRHRMLKYTPEHMHCLAM 895


>ref|XP_002270164.2| PREDICTED: ribosome biogenesis protein BMS1 homolog [Vitis
           vinifera]
          Length = 1139

 Score =  259 bits (662), Expect = 7e-67
 Identities = 140/250 (56%), Positives = 169/250 (67%), Gaps = 8/250 (3%)
 Frame = -1

Query: 977 TIRTGQKRRRLQFVECPDDINGMIDAAKYADIVLLLVDASYGFEAETFEFLSLLRVHGLP 798
           TI +G K RRLQFVECP+DINGMIDAAK+AD+ LLL+D SYGFE ETFEFL++L+VHG P
Sbjct: 123 TIVSG-KNRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQVHGFP 181

Query: 797 KVMGVLTHLDHFKDDKELTETIQRLQGHFQTEIGEGATTFQLSGLNDFELYKTLEVQKLA 618
           KVMGVLTHLD FKD K+L +T QRL+  F TEI +GA  F LSGL   + Y   E+  LA
Sbjct: 182 KVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLVHGK-YPKREIHNLA 240

Query: 617 EAISMLRLRTPSWRVEHPYVLVDRFEDVTPPEKLHKDANCKRNISLYGYLRGCNLKSRAK 438
             IS+++    SWR  HPY+LVDRFEDVTPPE++  +  C RNI+LYGYLRGCNLK   K
Sbjct: 241 RFISVMKFHPLSWRASHPYILVDRFEDVTPPERVQLNNKCDRNITLYGYLRGCNLKKGTK 300

Query: 437 VHLAGVGDFRLYGVRSTADPVPLSSE------MEMENDFFEPVHRRKKRL--KTGTYLRL 282
           VH+AGVGD  L GV   ADP PL S        + +  F+ P+      L  K   Y+ +
Sbjct: 301 VHIAGVGDHSLAGVTGLADPCPLPSAAKKKGLRDRDKLFYAPMSGLGDLLYDKDAVYINI 360

Query: 281 EVHNVPFGMV 252
             H V F  V
Sbjct: 361 NDHLVQFSNV 370



 Score =  154 bits (389), Expect = 3e-35
 Identities = 73/129 (56%), Positives = 91/129 (70%), Gaps = 2/129 (1%)
 Frame = -1

Query: 383  DPVPLSSEMEME--NDFFEPVHRRKKRLKTGTYLRLEVHNVPFGMVKNFDPCHPILVGGI 210
            + V L  +M M   ND  E      +  +TGTYLRLEVH+VPF MV++FDP HP+LVGGI
Sbjct: 709  EEVELRKQMNMAELNDLDEETRIEVEGFRTGTYLRLEVHDVPFEMVEHFDPFHPVLVGGI 768

Query: 209  SLEEENVGYMQARLKRHNWHMKLLKSEDPVTVSAGWRRYQTIPIFAMHLDSKQHEIAKYI 30
             L EENVGYMQ R+KRH WH KLLK+ DP+ VS GWRRYQTIP++A    + +H + KY 
Sbjct: 769  GLGEENVGYMQVRIKRHRWHKKLLKTRDPIIVSIGWRRYQTIPVYATEDCNGRHRMLKYT 828

Query: 29   PQYEHCLAM 3
             ++ HCLAM
Sbjct: 829  KEHMHCLAM 837


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