BLASTX nr result

ID: Papaver23_contig00018181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018181
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    72   7e-11
ref|XP_002889207.1| F-box family protein [Arabidopsis lyrata sub...    62   7e-08
ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata sub...    61   2e-07
ref|NP_199308.1| putative F-box/FBD/LRR-repeat protein [Arabidop...    60   3e-07
ref|XP_003541803.1| PREDICTED: uncharacterized protein LOC100785...    60   5e-07

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 53/159 (33%), Positives = 88/159 (55%), Gaps = 3/159 (1%)
 Frame = -1

Query: 634 LVEGISSVKILHISGSTLESFFWNEMNQIIPTFHDLRRLDVTSKLSDCMFFALLNLLHKM 455
           L+  IS+VK L ++G TL+S      +  +PTFH++ RL+    +    +  L N LH  
Sbjct: 299 LLGRISNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLEFLF-IGGFNWDFLPNFLHSS 357

Query: 454 PNLESVVIAQGFSPSENYHDLDTCG---SPRRQECLLQQLKAVEVREIDGKQEDLDMIKY 284
           PNLE++VI  G++     ++L   G     +   CL+  LK +E+R I G+  +L+ ++Y
Sbjct: 358 PNLEALVIETGYT-----NELIPEGWLMPLQVPACLVLHLKEIEIRRIVGEDYELEAVEY 412

Query: 283 VLRNSPALQIMTIAFPSGLPQCRQDSVMKKILMLPKCSK 167
           +L+N+  LQ MTI         ++  V KK+L LP+ S+
Sbjct: 413 LLKNAEVLQQMTIDCHESYMD-QEFCVCKKLLGLPRGSR 450


>ref|XP_002889207.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335048|gb|EFH65466.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 451

 Score = 62.4 bits (150), Expect = 7e-08
 Identities = 49/164 (29%), Positives = 82/164 (50%), Gaps = 1/164 (0%)
 Frame = -1

Query: 643 LKNLVEGISSVKILHISGSTLESFFWNEMNQIIPTFHDLRRLDVTSKLSDCMFFALLNLL 464
           +++ +  IS+VK L IS  TLE  F +     +P FH+L  L +     D     L   L
Sbjct: 287 IRDFLAEISTVKTLFISSHTLEVIFDSSCE--LPVFHNLSSLHID--FEDHSLKMLSTFL 342

Query: 463 HKMPNLESVVIAQGFSPSENYHDLDTCGSPRRQECLLQQLKAVEV-REIDGKQEDLDMIK 287
              PNL+S+V+    S  E     D  G      C L  L+ V++ R I G+   + ++ 
Sbjct: 343 QSCPNLKSLVVEFKDSSEE-----DGVGVLSIPLCFLTTLEYVKIERPITGEARGMKLVS 397

Query: 286 YVLRNSPALQIMTIAFPSGLPQCRQDSVMKKILMLPKCSKFTAC 155
           Y+L NSP L+ +T++  S   +  +  ++K++L +P+ S  T+C
Sbjct: 398 YILENSPILKKLTLSLKSS-RENEESVILKELLTVPRLS--TSC 438


>ref|XP_002880735.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297326574|gb|EFH56994.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 440

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 3/162 (1%)
 Frame = -1

Query: 643 LKNLVEGISSVKILHISGSTLESFFWNEMNQIIPTFHDLRRLDVTSKLSDCMFFALLNLL 464
           +++ + GIS ++ + IS  TLE  +       IP F +L RL   +  S  MF  LL  L
Sbjct: 282 IRDFLTGISCIRDMIISQRTLEVLYLYSKLGPIPKFDNLYRLQ--AAFSRSMFQLLLVFL 339

Query: 463 HKMPNLESVVI--AQGFSPSENYHDLDTCGSPRRQECLLQQLKAVEVRE-IDGKQEDLDM 293
              PNLE++++  A    P ++       G     +CLL  L+ VE+RE I G++    +
Sbjct: 340 ESCPNLENLILDFAVSTEPEQD-------GLTYVPQCLLSTLECVEIRELIMGEETGKKL 392

Query: 292 IKYVLRNSPALQIMTIAFPSGLPQCRQDSVMKKILMLPKCSK 167
           + Y L+NS  LQ + + F       +   + K++    K S+
Sbjct: 393 VSYFLKNSVVLQKLIVRFKDSSIATQDSDIFKELRTFTKRSR 434


>ref|NP_199308.1| putative F-box/FBD/LRR-repeat protein [Arabidopsis thaliana]
           gi|75262649|sp|Q9FLA2.1|FDL34_ARATH RecName:
           Full=Putative F-box/FBD/LRR-repeat protein At5g44950
           gi|10177487|dbj|BAB10878.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007796|gb|AED95179.1|
           putative F-box/FBD/LRR-repeat protein [Arabidopsis
           thaliana]
          Length = 438

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 1/160 (0%)
 Frame = -1

Query: 643 LKNLVEGISSVKILHISGSTLESFFWNEMNQIIPTFHDLRRLDVTSKLSDCMFFALLNLL 464
           +++ + GISSVK + IS  TLE  +       +P FH+L  L      S  +   L   L
Sbjct: 279 IRDFLTGISSVKHMIISHPTLEVLYRYSKIGQLPKFHNLYHLQAV--FSSSLLQLLPAFL 336

Query: 463 HKMPNLESVVIAQGFSPSENYHDLDTCGSPRRQECLLQQLKAVEVREIDGKQED-LDMIK 287
              PNL+++++   +S S     +D    PR   CL+  L+ VE++++  ++E  + ++K
Sbjct: 337 EICPNLKNLIL--DYSISAEPEQIDFTNLPR---CLISTLEYVEIKQLTMREESGIKLVK 391

Query: 286 YVLRNSPALQIMTIAFPSGLPQCRQDSVMKKILMLPKCSK 167
           Y L NS  L+ +T++F       ++  +  ++L   K S+
Sbjct: 392 YFLENSAVLKKLTLSFIDSPMTNQESEIYMQLLTSTKRSR 431


>ref|XP_003541803.1| PREDICTED: uncharacterized protein LOC100785310 [Glycine max]
          Length = 171

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 37/108 (34%), Positives = 56/108 (51%), Gaps = 2/108 (1%)
 Frame = -1

Query: 481 ALLNLLHKMPNLESVVIAQGFSPSENYHDLDTCGSPRRQECLLQQLKAVEVREIDGKQED 302
           ALLN+LH  P L ++V+  G S S      D   S    +C L  LK  + +E +  + +
Sbjct: 57  ALLNILHNSPILNTLVLQNGVSESNK----DVLASAPVPQCFLSSLKVFQFKEFNVHELE 112

Query: 301 LDMIKYVLRNSPALQIMTI--AFPSGLPQCRQDSVMKKILMLPKCSKF 164
           L ++K+V+ N+  L+ MTI  AF         + V ++IL  PKCS F
Sbjct: 113 LLLVKFVMANAAMLEQMTICSAFWLRYSDIDMEKVKEQILSFPKCSNF 160


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