BLASTX nr result

ID: Papaver23_contig00018166 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00018166
         (827 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-11
ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus ...    73   7e-11
ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06...    69   1e-09
ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|35548...    67   4e-09
emb|CBI39466.3| unnamed protein product [Vitis vinifera]               66   8e-09

>ref|XP_002300155.1| predicted protein [Populus trichocarpa] gi|222847413|gb|EEE84960.1|
           predicted protein [Populus trichocarpa]
          Length = 364

 Score = 63.5 bits (153), Expect(2) = 4e-11
 Identities = 69/239 (28%), Positives = 101/239 (42%), Gaps = 26/239 (10%)
 Frame = +3

Query: 189 VYKTIDFDVTSS---------LPYPMAV-RTDLPQNTFLPGYPRNYPCDGLISLSTGSPY 338
           +Y ++DF+  S          LPYP A  RT+      + G      CDGL+ +  G   
Sbjct: 66  LYSSVDFEAASDGDGINAVMELPYPSAASRTESFAFASIRG-----SCDGLVCIRNGGDV 120

Query: 339 GDRWKMICLWNPSTREYKDIPTPTSNLE--GFSRYGVCYDWKIDDYKLF---KLVANSEF 503
            D +    LWNPSTRE K +P P+S+++  GF   G+ YD  IDDYKL       AN   
Sbjct: 121 HDMF----LWNPSTRESKKLPKPSSSVQKHGFLT-GLGYDSTIDDYKLVIACLTTANGSH 175

Query: 504 SITSEVWVSRLXXXXXXXXXXXXXXVNLSNNMCVKPLNGIIHWIGNTE--------AIVS 659
            I +   V  L              + L     V   NG +HW+G  E         I S
Sbjct: 176 QIMAPE-VFTLKTNSWRRIQGIHSGITLEGGAGVF-WNGALHWLGKQETGADHDVDVIFS 233

Query: 660 FDIVEERTKE-IQVPSCYLHDCRYSYEDMEVVVLGEELCL--SVHPSMKSNIELWVMKD 827
            D+ +E+    + +P+   H C        + + G  LC+   +HP  +S  E W+  +
Sbjct: 234 LDVAQEKFMGFVPLPN---HFC-----TAVLSISGNCLCIFGKLHPD-ESYFEAWITSE 283



 Score = 30.4 bits (67), Expect(2) = 4e-11
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +2

Query: 92  MASLPEDMIFVIVSKLPVKSISRFR 166
           M+ LP+D+I  I++ LPVKS+ RF+
Sbjct: 1   MSKLPQDIIVDILTYLPVKSLVRFK 25


>ref|XP_002520393.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223540440|gb|EEF42009.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 369

 Score = 73.2 bits (178), Expect = 7e-11
 Identities = 60/181 (33%), Positives = 82/181 (45%), Gaps = 6/181 (3%)
 Frame = +3

Query: 300 CDGLISLSTGSPYGDRWKMICLWNPSTREYKDIPTPTSNLEGFSRYGVCYDWKIDDYKLF 479
           C+GLIS   GS +      I +WNPST E + +P PTS+ E    YG  YD K+DDY   
Sbjct: 109 CNGLISAVFGSDHE-----ITVWNPSTGESRKLPAPTSSTEDKLFYGFGYDSKLDDY--- 160

Query: 480 KLVANSEFSITSEVWVSRLXXXXXXXXXXXXXXVNLSNNMCVKPLNGIIHW----IGNTE 647
           K+V  +  +  +EV +                  N+        LNGI+HW    +    
Sbjct: 161 KIVRGASSASCNEVQMEVFNLKGNRWRAIQNLHCNVRFQGSAIALNGILHWLVDQLNEGL 220

Query: 648 AIVSFDIVEERTKEIQVPSCYLHDCRYSYEDMEVVVLGEEL--CLSVHPSMKSNIELWVM 821
            IVS D+ EE+  E+ V    L D        E+ VLG+ L  C S H    +N E W +
Sbjct: 221 MIVSLDLAEEKFLEMVV----LPDYVTENWGTELKVLGDSLSVCSSSH---TTNFEAWTV 273

Query: 822 K 824
           K
Sbjct: 274 K 274


>ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Vitis
           vinifera]
          Length = 360

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 53/195 (27%), Positives = 84/195 (43%), Gaps = 19/195 (9%)
 Frame = +3

Query: 300 CDGLISLSTGSPYGDRWKMICLWNPSTREYKDIPTPTSNLEGFSRYGVCYDWKIDDYKLF 479
           CDGL+ +       D +    LWNPSTR++  +P P+        YG  YD+  DDYK+ 
Sbjct: 100 CDGLLCVI------DSFHNPALWNPSTRQFNPLPKPSFLENSDILYGFTYDYSSDDYKIV 153

Query: 480 KLVANSEFSITSEVWVSRLXXXXXXXXXXXXXXVNLSNNMCVKP-------LNGIIHWI- 635
           ++V+ S   I +E+ V  L                +      +P       LNG  +W+ 
Sbjct: 154 RVVSTSRDVIKTEIDVFELKTNEWR---------RVEETHYSRPAWDVGTFLNGAFYWLA 204

Query: 636 --------GNTEAIVSFDIVEERTKEIQVPSCYLHDCRYSYEDMEVV---VLGEELCLSV 782
                   G +  +VSFD+ EER KE+++PS           D+ ++   V G  L    
Sbjct: 205 WRLSEGHEGFSRVVVSFDLKEERFKEVELPS-----------DVGIINLRVFGGYLSAMY 253

Query: 783 HPSMKSNIELWVMKD 827
           H       ++WVM++
Sbjct: 254 HDLYGELTKMWVMEE 268


>ref|XP_003599499.1| F-box protein [Medicago truncatula] gi|355488547|gb|AES69750.1|
           F-box protein [Medicago truncatula]
          Length = 489

 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 66/238 (27%), Positives = 101/238 (42%), Gaps = 27/238 (11%)
 Frame = +3

Query: 195 KTIDFDVTSSLPYPMAVRTDLPQNTFLPGYPRNYP----CDGLISLSTGSPYGDRWKMIC 362
           ++IDF+ + +     +  T L  N  LP    N      C G I L+  S        I 
Sbjct: 186 RSIDFEASLN---DDSASTSLNLNFMLPESYSNLEIKSSCRGFIVLTCSSN-------IY 235

Query: 363 LWNPSTREYKDIPTPTSNLE---GFSRYGVCYDWKIDDYKLFKLVANSE----------- 500
           LWNPSTR +K IP P SNL+       YG  YD   DDY +  +  +             
Sbjct: 236 LWNPSTRHHKKIPFPPSNLDAKYSCCLYGFGYDHSRDDYLVVSVSYDKSIDLIEENISSH 295

Query: 501 ---FSITSEVWVSRLXXXXXXXXXXXXXXVNLSNNMCVKPL-NGIIHWIG-----NTEAI 653
              FS+ +  W + +              +N++++  V  L NG IHW       + + I
Sbjct: 296 LKFFSLRANTW-NEIECLGLVKYKHFPYYMNVNDDPTVGTLFNGNIHWFSFRNDLSMDVI 354

Query: 654 VSFDIVEERTKEIQVPSCYLHDCRYSYEDMEVVVLGEELCLSVHPSMKSNIELWVMKD 827
           ++FD+VE    E+  P  + H+      D ++ + GE L L     +   IE+WVMK+
Sbjct: 355 IAFDLVERELLEMPFPDGFDHEPM----DCDLWIFGEFLSLWAMGGV--TIEIWVMKE 406


>emb|CBI39466.3| unnamed protein product [Vitis vinifera]
          Length = 357

 Score = 66.2 bits (160), Expect = 8e-09
 Identities = 52/182 (28%), Positives = 81/182 (44%), Gaps = 6/182 (3%)
 Frame = +3

Query: 300 CDGLISLSTGSPYGDRWKMICLWNPSTREYKDIPTPTSNLEGFSRYGVCYDWKIDDYKLF 479
           CDGL+ L       D    I LWNPSTR+   +P   + L+    +G  YD   DDYK+F
Sbjct: 111 CDGLLCLV------DLANKIVLWNPSTRQCNQLPPNPNVLDFLGCHGFGYDSFADDYKVF 164

Query: 480 KL-VANSEFSITSEVWVSRLXXXXXXXXXXXXXXVNLSNNMCVKPLNGIIHWIG-----N 641
            + + N  F    +V+  +                  +  MC   L+G +HW+       
Sbjct: 165 LVSMLNPNFETVVDVFSLKSNKWKRIQEKHH----TRAARMCATVLHGALHWVAYDPILG 220

Query: 642 TEAIVSFDIVEERTKEIQVPSCYLHDCRYSYEDMEVVVLGEELCLSVHPSMKSNIELWVM 821
            + I++FD  +ER +E+ +P           E++ V +     CL VH S K   ++WVM
Sbjct: 221 FDTIMAFDFEKERFREMAIPR--------EEEELYVKLRVVGGCLCVHGS-KDPSKMWVM 271

Query: 822 KD 827
           K+
Sbjct: 272 KE 273


Top