BLASTX nr result

ID: Papaver23_contig00017984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017984
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590891.1| F-box family-like protein [Medicago truncatu...    68   2e-09
ref|XP_002453019.1| hypothetical protein SORBIDRAFT_04g036810 [S...    67   4e-09
ref|XP_002513764.1| conserved hypothetical protein [Ricinus comm...    67   4e-09
ref|XP_002513763.1| conserved hypothetical protein [Ricinus comm...    67   6e-09
ref|XP_003590868.1| F-box protein PP2-B1 [Medicago truncatula] g...    65   1e-08

>ref|XP_003590891.1| F-box family-like protein [Medicago truncatula]
           gi|355479939|gb|AES61142.1| F-box family-like protein
           [Medicago truncatula]
          Length = 341

 Score = 68.2 bits (165), Expect = 2e-09
 Identities = 30/59 (50%), Positives = 45/59 (76%)
 Frame = +2

Query: 92  RGDGWMEVEMGYFYNEGGDNKGGEVHMSVLETERGVHKRGLIVQGMELRPKVDDTNSHS 268
           R DGW+E+EMG F+N G +N+  EV M+V++T+ G  KRGL+++G+E+RPK +  N HS
Sbjct: 217 RSDGWLEIEMGEFFNSGIENE--EVQMNVIQTKGGNWKRGLVLEGIEVRPKYNTINQHS 273


>ref|XP_002453019.1| hypothetical protein SORBIDRAFT_04g036810 [Sorghum bicolor]
           gi|241932850|gb|EES05995.1| hypothetical protein
           SORBIDRAFT_04g036810 [Sorghum bicolor]
          Length = 613

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 40/70 (57%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = +2

Query: 38  GGGHSPPDPLEHEYFARERGDGWMEVEMGYFYN-EGGDNKGGEVHMSVLETERGVHKRGL 214
           G G +P  P       +ER DGWME+EMG FYN EGGD   GEV  S+L+T R   KRGL
Sbjct: 552 GHGRNPVLP-------QERTDGWMELEMGVFYNKEGGD---GEVRFSLLQTSR-TSKRGL 600

Query: 215 IVQGMELRPK 244
           IVQG+E+RPK
Sbjct: 601 IVQGIEIRPK 610


>ref|XP_002513764.1| conserved hypothetical protein [Ricinus communis]
           gi|223546850|gb|EEF48347.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 67.0 bits (162), Expect = 4e-09
 Identities = 32/54 (59%), Positives = 42/54 (77%)
 Frame = +2

Query: 83  ARERGDGWMEVEMGYFYNEGGDNKGGEVHMSVLETERGVHKRGLIVQGMELRPK 244
           ++ERGDGW+EVE+G F+N  G+  G E+ MSVLE + G  K GLIVQG+E+RPK
Sbjct: 250 SKERGDGWLEVELGEFFNRDGN--GEELEMSVLEVKGGKWKGGLIVQGIEIRPK 301


>ref|XP_002513763.1| conserved hypothetical protein [Ricinus communis]
           gi|223546849|gb|EEF48346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 301

 Score = 66.6 bits (161), Expect = 6e-09
 Identities = 30/57 (52%), Positives = 44/57 (77%)
 Frame = +2

Query: 80  FARERGDGWMEVEMGYFYNEGGDNKGGEVHMSVLETERGVHKRGLIVQGMELRPKVD 250
           + +ERGDGW+E+E+G F+ + G++  GE+ +SVLE + G  K GL VQG+E+RPKVD
Sbjct: 247 YPKERGDGWLEIELGEFFKKKGED--GELELSVLEVKGGHWKGGLAVQGIEIRPKVD 301


>ref|XP_003590868.1| F-box protein PP2-B1 [Medicago truncatula]
           gi|355479916|gb|AES61119.1| F-box protein PP2-B1
           [Medicago truncatula]
          Length = 310

 Score = 65.5 bits (158), Expect = 1e-08
 Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 4/69 (5%)
 Frame = +2

Query: 50  SPPDPLEH----EYFARERGDGWMEVEMGYFYNEGGDNKGGEVHMSVLETERGVHKRGLI 217
           +P +P E       + +ER DGW+E+E+G F+NEGGD+K  +V + V E + G  K GL+
Sbjct: 240 APVEPTESVADLRKYPKERADGWLEMELGEFFNEGGDDK--QVDIGVCEVKGGGWKGGLV 297

Query: 218 VQGMELRPK 244
           VQG+E+RPK
Sbjct: 298 VQGIEIRPK 306


Top