BLASTX nr result

ID: Papaver23_contig00017982 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017982
         (501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycin...    84   9e-15
ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein ...    84   1e-14
ref|XP_003625508.1| RNA binding protein [Medicago truncatula] gi...    84   2e-14
ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein ...    83   2e-14
ref|XP_002531336.1| RNA binding protein, putative [Ricinus commu...    79   4e-13

>ref|NP_001237071.1| uncharacterized protein LOC100306326 [Glycine max]
           gi|255628209|gb|ACU14449.1| unknown [Glycine max]
          Length = 139

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/59 (66%), Positives = 43/59 (72%)
 Frame = +3

Query: 3   YATIEDAERAQEGMNAKYLDGWVIFVDPAKXXXXXXXXXXXXXXSETGFRVNKTVGWCG 179
           Y TIE+AE+A+EGMNAK+LDGWVIFVDPAK              SETGF VNKTVGWCG
Sbjct: 81  YTTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSETGFTVNKTVGWCG 139


>ref|XP_002274178.1| PREDICTED: glycine-rich RNA-binding protein 2 [Vitis vinifera]
           gi|297741476|emb|CBI32608.3| unnamed protein product
           [Vitis vinifera]
          Length = 140

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 37/59 (62%), Positives = 43/59 (72%)
 Frame = +3

Query: 3   YATIEDAERAQEGMNAKYLDGWVIFVDPAKXXXXXXXXXXXXXXSETGFRVNKTVGWCG 179
           Y T+E+AE+A+EGMNAK+LDGWVIFVDPAK              SETGFR NKT+GWCG
Sbjct: 82  YTTLEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPPQQEPESSETGFRTNKTIGWCG 140


>ref|XP_003625508.1| RNA binding protein [Medicago truncatula]
           gi|355500523|gb|AES81726.1| RNA binding protein
           [Medicago truncatula]
          Length = 141

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 38/59 (64%), Positives = 44/59 (74%)
 Frame = +3

Query: 3   YATIEDAERAQEGMNAKYLDGWVIFVDPAKXXXXXXXXXXXXXXSETGFRVNKTVGWCG 179
           Y+TIE+AE+A+EGMNAK+LDGWVIFVDPAK              S+TGF VNKTVGWCG
Sbjct: 83  YSTIEEAEKAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSQTGFTVNKTVGWCG 141


>ref|XP_003521342.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
           [Glycine max]
          Length = 139

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 39/59 (66%), Positives = 42/59 (71%)
 Frame = +3

Query: 3   YATIEDAERAQEGMNAKYLDGWVIFVDPAKXXXXXXXXXXXXXXSETGFRVNKTVGWCG 179
           Y TIE+AERA+EGMNAK+LDGWVIFVDPAK              SE GF VNKTVGWCG
Sbjct: 81  YTTIEEAERAREGMNAKFLDGWVIFVDPAKPREPRPPQQSQSQPSEIGFTVNKTVGWCG 139


>ref|XP_002531336.1| RNA binding protein, putative [Ricinus communis]
           gi|223529058|gb|EEF31043.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 144

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 36/61 (59%), Positives = 45/61 (73%), Gaps = 2/61 (3%)
 Frame = +3

Query: 3   YATIEDAERAQEGMNAKYLDGWVIFVDPAK--XXXXXXXXXXXXXXSETGFRVNKTVGWC 176
           YATIE+AE+A+EGMNAK+LDGWVIFVDPAK                SETG+++N+T+GWC
Sbjct: 84  YATIEEAEKAREGMNAKFLDGWVIFVDPAKPREQRLPPPPPPQPETSETGYKINRTIGWC 143

Query: 177 G 179
           G
Sbjct: 144 G 144


Top