BLASTX nr result

ID: Papaver23_contig00017970 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017970
         (645 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]    92   6e-17
emb|CBI32913.3| unnamed protein product [Vitis vinifera]               84   2e-14
ref|NP_190836.2| F-box/RNI-like/FBD-like domain-containing prote...    74   2e-11
emb|CAB89229.1| putative protein [Arabidopsis thaliana]                74   2e-11
ref|XP_002869614.1| F-box family protein [Arabidopsis lyrata sub...    72   7e-11

>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score = 92.4 bits (228), Expect = 6e-17
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 1/190 (0%)
 Frame = -1

Query: 645 LSKSFRELWTIIPRLDFDDELFKIHRVNNKKQIQNPKFENFVSNVMRLLQDGAHGVDRFR 466
           LSK +R LW  +P LDFDDEL+       + + +   F+NFV  V+R  +     + +FR
Sbjct: 38  LSKRWRYLWASVPILDFDDELWLNPSTLVELEERIIMFQNFVDGVLRHSEVSC--IKKFR 95

Query: 465 LSWSHCDMSLVNQWIXXXXXXXXXXXXXXLRHNESAEKIRYPITLPLCVFNSDSLVSLKL 286
           L +   ++  V  WI              L        I + + LP   F   +LV +KL
Sbjct: 96  LGYRDNNLDSVYSWICIALERRVQELDLHLL-------IDWRVELPPMFFICKTLVVVKL 148

Query: 285 KLQDCELFM-LPTSICLNKLKMLHLEGVRFSGDGAVQKLLAGCPILETLVMVGCHIYDEK 109
               C LF+ +PT++ L  LK LHL+ V +S D ++QKLL+GCP+LE LV+      ++ 
Sbjct: 149 S---CALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQW 205

Query: 108 VVDISVPSLR 79
           VV++S PSL+
Sbjct: 206 VVNVSNPSLK 215


>emb|CBI32913.3| unnamed protein product [Vitis vinifera]
          Length = 348

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 1/190 (0%)
 Frame = -1

Query: 645 LSKSFRELWTIIPRLDFDDELFKIHRVNNKKQIQNPKFENFVSNVMRLLQDGAHGVDRFR 466
           LSK +R LW  +P LDFDDEL+       + + +   F+NFV  V+R  +     + +FR
Sbjct: 38  LSKRWRYLWASVPILDFDDELWLNPSTLVELEERIIMFQNFVDGVLRHSEVSC--IKKFR 95

Query: 465 LSWSHCDMSLVNQWIXXXXXXXXXXXXXXLRHNESAEKIRYPITLPLCVFNSDSLVSLKL 286
           L +   D +L N                            + + LP   F   +LV +KL
Sbjct: 96  LGYR--DNNLDN----------------------------WGVELPPMFFICKTLVVVKL 125

Query: 285 KLQDCELFM-LPTSICLNKLKMLHLEGVRFSGDGAVQKLLAGCPILETLVMVGCHIYDEK 109
               C LF+ +PT++ L  LK LHL+ V +S D ++QKLL+GCP+LE LV+      ++ 
Sbjct: 126 S---CALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLLSGCPVLEELVIEREERDNQW 182

Query: 108 VVDISVPSLR 79
           VV++S PSL+
Sbjct: 183 VVNVSNPSLK 192


>ref|NP_190836.2| F-box/RNI-like/FBD-like domain-containing protein [Arabidopsis
           thaliana] gi|186510981|ref|NP_001118825.1|
           F-box/RNI-like/FBD-like domain-containing protein
           [Arabidopsis thaliana]
           gi|209572618|sp|Q9LXJ6.2|FDL21_ARATH RecName:
           Full=F-box/FBD/LRR-repeat protein At3g52680
           gi|115311415|gb|ABI93888.1| At3g52680 [Arabidopsis
           thaliana] gi|332645458|gb|AEE78979.1|
           F-box/RNI-like/FBD-like domain-containing protein
           [Arabidopsis thaliana] gi|332645459|gb|AEE78980.1|
           F-box/RNI-like/FBD-like domain-containing protein
           [Arabidopsis thaliana]
          Length = 456

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/193 (27%), Positives = 92/193 (47%)
 Frame = -1

Query: 645 LSKSFRELWTIIPRLDFDDELFKIHRVNNKKQIQNPKFENFVSNVMRLLQDGAHGVDRFR 466
           LSK +R LW ++P L+FD + ++       + +     ++F+S+   +L+        FR
Sbjct: 49  LSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIV----CKSFLSHKAPVLES-------FR 97

Query: 465 LSWSHCDMSLVNQWIXXXXXXXXXXXXXXLRHNESAEKIRYPITLPLCVFNSDSLVSLKL 286
           L + + +   +  W+                  E  + + +     LC  N+  L +LKL
Sbjct: 98  LKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLCTCNT--LETLKL 155

Query: 285 KLQDCELFMLPTSICLNKLKMLHLEGVRFSGDGAVQKLLAGCPILETLVMVGCHIYDEKV 106
            L  C L  +P+ + +  L+ LHLE VR+  + +V+ LL+GCP LE L +      D KV
Sbjct: 156 VL--CILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKV 213

Query: 105 VDISVPSLRNFTM 67
             I VPSL+  T+
Sbjct: 214 FTIEVPSLQRLTI 226


>emb|CAB89229.1| putative protein [Arabidopsis thaliana]
          Length = 451

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 54/193 (27%), Positives = 92/193 (47%)
 Frame = -1

Query: 645 LSKSFRELWTIIPRLDFDDELFKIHRVNNKKQIQNPKFENFVSNVMRLLQDGAHGVDRFR 466
           LSK +R LW ++P L+FD + ++       + +     ++F+S+   +L+        FR
Sbjct: 44  LSKQWRSLWKLVPNLEFDSDDYESEHYTFSEIV----CKSFLSHKAPVLES-------FR 92

Query: 465 LSWSHCDMSLVNQWIXXXXXXXXXXXXXXLRHNESAEKIRYPITLPLCVFNSDSLVSLKL 286
           L + + +   +  W+                  E  + + +     LC  N+  L +LKL
Sbjct: 93  LKFVNFNPVDIGLWVGIAFSRHLRELVLDFYPAELGKGVTFTFPSSLCTCNT--LETLKL 150

Query: 285 KLQDCELFMLPTSICLNKLKMLHLEGVRFSGDGAVQKLLAGCPILETLVMVGCHIYDEKV 106
            L  C L  +P+ + +  L+ LHLE VR+  + +V+ LL+GCP LE L +      D KV
Sbjct: 151 VL--CILVDIPSPVLMKSLRTLHLEFVRYKDESSVRNLLSGCPGLEELRLYRGDDSDIKV 208

Query: 105 VDISVPSLRNFTM 67
             I VPSL+  T+
Sbjct: 209 FTIEVPSLQRLTI 221


>ref|XP_002869614.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297315450|gb|EFH45873.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 418

 Score = 72.4 bits (176), Expect = 7e-11
 Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
 Frame = -1

Query: 645 LSKSFRELWTIIPRLDFDDELFKIHRVNNKKQIQNPKFENFVSNVMRLLQDGAHGVDRFR 466
           LSK ++ LW ++P+L ++D       +N+    +N  F  FV     LL + A  ++   
Sbjct: 30  LSKRWQFLWMLVPQLQYND-------INHSGDYKN--FSQFVYR--SLLSNKASVIEHLH 78

Query: 465 LSWS-HCDMSLVNQWIXXXXXXXXXXXXXXLRHNESAEKIRYPITLPLCVFNSDSLVSLK 289
           L+    C    +  WI              +R   S E + +  +LP  ++ SD+L +L+
Sbjct: 79  LNLGPECPAIDIGLWIGIALSRRLRELEINIR--SSFENVSF--SLPSSLYTSDTLETLR 134

Query: 288 LKLQDCELFMLPTSICLNKLKMLHLEGVRFSGDGAVQKLLAGCPILETLVMVGCHIYDEK 109
           +   +  L ++P+S+CL  LK+LHL+ V +  D ++  LL+GCP LE L +       E 
Sbjct: 135 VI--NFVLLVVPSSVCLPSLKVLHLKTVDYEDDASLPNLLSGCPNLEELCLERHDQDSEM 192

Query: 108 VVDISVPSLRNFTMSHIYLPSYSRIEISNPKLVVFN 1
              + VPSLR  +M         R  I  P L   N
Sbjct: 193 DFTVVVPSLRRLSMMDENYVKCGRYVIDVPSLKYLN 228


Top