BLASTX nr result

ID: Papaver23_contig00017922 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017922
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B...    65   4e-09
ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis ly...    60   1e-07
gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]           60   2e-07
ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
ref|XP_002509838.1| zinc finger protein, putative [Ricinus commu...    57   1e-06

>ref|XP_002279473.1| PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Vitis vinifera]
          Length = 168

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/103 (41%), Positives = 56/103 (54%)
 Frame = +2

Query: 158 VPTFILLTCYILGIIKSFFSSILQILGFVKFADSEDVISTHTYPQEESHHSVVASVNLIR 337
           +P  +L T  +LG I+   S   + LG   F +  D++ T    Q     SV  S  LIR
Sbjct: 12  LPKLLLHTLSLLGFIRKLISYFFRFLGLTDFLEP-DIVWTEGSTQVPEFQSV--SAVLIR 68

Query: 338 RALPSVKFEDLVLAREVDACDQDSCAICLCEYEGQDEIRPLMN 466
             LP +KFE+LV A   D  DQ  CA+CL E+EGQ+EIR L N
Sbjct: 69  EILPVMKFEELVGAGAGDPPDQ--CAVCLYEFEGQEEIRRLTN 109


>ref|XP_002872579.1| ring-H2 finger protein RHA1b [Arabidopsis lyrata subsp. lyrata]
           gi|297318416|gb|EFH48838.1| ring-H2 finger protein RHA1b
           [Arabidopsis lyrata subsp. lyrata]
          Length = 157

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 29/104 (27%), Positives = 51/104 (49%)
 Frame = +2

Query: 155 KVPTFILLTCYILGIIKSFFSSILQILGFVKFADSEDVISTHTYPQEESHHSVVASVNLI 334
           ++P ++L T Y++G  +    ++   +G   F D  +     TY  + +HH++  S +L 
Sbjct: 11  QIPEYVLKTLYVIGFFRDMVDALFPYIGLPSFLDHHE-----TYRPDPTHHALSTSASLA 65

Query: 335 RRALPSVKFEDLVLAREVDACDQDSCAICLCEYEGQDEIRPLMN 466
              +P V+F DL+   E      D C +CL ++   D IR L N
Sbjct: 66  NELIPVVRFSDLLTDPE------DCCTVCLSDFNSDDMIRQLPN 103


>gb|AEI84328.1| ubiquitin-protein ligase E3 [Jatropha curcas]
          Length = 171

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
 Frame = +2

Query: 158 VPTFILLTCYILGIIKSFFSSILQILGFVKFADSEDVISTHTYPQEES--HHSVVASVNL 331
           +P   + T  +LG I+S    +   LG   F +++++     +P   +  H     S  L
Sbjct: 12  LPKLFVHTLSLLGFIRSLILCLFNYLGLSDFLETDNI-----WPDNPTRIHSHPPVSATL 66

Query: 332 IRRALPSVKFEDLVL-AREVDACDQDSCAICLCEYEGQDEIRPLMN 466
           IR  LP +KFEDLV  A E D    +SCA+CL E++G+DEIR L N
Sbjct: 67  IREILPVIKFEDLVPGAGEGDL--PESCAVCLYEFDGEDEIRWLKN 110


>ref|XP_002320813.1| predicted protein [Populus trichocarpa] gi|222861586|gb|EEE99128.1|
           predicted protein [Populus trichocarpa]
          Length = 165

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
 Frame = +2

Query: 158 VPTFILLTCYILGIIKSFFSSILQILGFVKFADSEDVISTHTYPQEESHHSVVASVNLIR 337
           +P   +    +LG I+     +   +G   F +++++     YP   S +  +++  LIR
Sbjct: 12  LPKLFVHALSLLGFIRGLVLCLFTYVGLSDFLETDNIWPD--YPTRTSFYPSLSAA-LIR 68

Query: 338 RALPSVKFEDLVLAREVDACD-QDSCAICLCEYEGQDEIRPLMN 466
             LP +KFEDL L  +   CD  +SCA+CL E+EG+DEIR L N
Sbjct: 69  EILPVIKFEDL-LGGDGGCCDLPESCAVCLYEFEGEDEIRWLKN 111


>ref|XP_002509838.1| zinc finger protein, putative [Ricinus communis]
           gi|223549737|gb|EEF51225.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 164

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 39/103 (37%), Positives = 53/103 (51%)
 Frame = +2

Query: 158 VPTFILLTCYILGIIKSFFSSILQILGFVKFADSEDVISTHTYPQEESHHSVVASVNLIR 337
           +P  ++ T  ILG I+   +++ + LG   F +  D+    T  +    +S  AS  LIR
Sbjct: 12  LPKLLIHTLSILGFIRKLINTLFRYLGLPDFLEP-DISWPETPSRVPEFYS--ASAVLIR 68

Query: 338 RALPSVKFEDLVLAREVDACDQDSCAICLCEYEGQDEIRPLMN 466
             LP VKF DLV          DSCA+CL E+E  DEIR L N
Sbjct: 69  EILPVVKFSDLV-------DPPDSCAVCLYEFEDHDEIRRLTN 104


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