BLASTX nr result

ID: Papaver23_contig00017879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017879
         (863 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana] g...    59   2e-06
ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|2...    56   9e-06

>ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana]
           gi|75266820|sp|Q9T0J4.1|FB249_ARATH RecName:
           Full=Putative F-box protein At4g38870
           gi|4490339|emb|CAB38621.1| putative protein [Arabidopsis
           thaliana] gi|7270870|emb|CAB80550.1| putative protein
           [Arabidopsis thaliana] gi|332661585|gb|AEE86985.1|
           putative F-box protein [Arabidopsis thaliana]
          Length = 426

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
 Frame = -3

Query: 837 IMVFTLGTR--CWRKIEIPNPPRKLFGDDVYKAAISCSGVLYWRTTAGSR----DMISFD 676
           I V TLGTR   WR I    PP     ++     +  +GVLY+R   G++     ++SFD
Sbjct: 228 IQVLTLGTRDSSWRMIHDIIPPHSPVSEE-----LCINGVLYYRAFIGTKLNESAIMSFD 282

Query: 675 LYSEKFQVLRIPSECIVSSAEQQHQAVIVGHLEFKGSLCVVRLEK-TSGTSQNNCKVHLY 499
           + SEKF ++++P  C   S  +          +++G L V+  EK TSG       + L+
Sbjct: 283 VRSEKFDLIKVP--CNFRSFSKL--------AKYEGKLAVIFYEKKTSGI------IGLW 326

Query: 498 ALSDKSNSIWTKKTFLL 448
            L D SN  W+KKTF L
Sbjct: 327 ILEDASNGEWSKKTFAL 343


>ref|XP_002299005.1| predicted protein [Populus trichocarpa] gi|222846263|gb|EEE83810.1|
           predicted protein [Populus trichocarpa]
          Length = 412

 Score = 56.2 bits (134), Expect = 9e-06
 Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 29/234 (12%)
 Frame = -3

Query: 831 VFTLGTRCWRKIEIPNPPRKLFGDDV---YKAAISCSGVLYWRTTAGSR----DMISFDL 673
           +FTLGT  WR+I         +G      +K AI   GV+YW   + +     ++ SFD+
Sbjct: 192 IFTLGTERWRRIN--RKHYNFYGGAKWYDFKEAICVKGVIYWMVKSMAESLKINLHSFDV 249

Query: 672 YSEKFQVLRIPSE--CIVSSAEQQHQAVIVGHLEFKGSLCVVRLEKTSGTSQNNCKVHLY 499
           + EKFQ + +P    C+ S             ++ +G L V++       S+   K  L 
Sbjct: 250 HGEKFQQVAVPGNGLCLFSDL-----------IQIEGCLAVIQ------DSECGNKFKLK 292

Query: 498 ALSDKSNSIWTKKTFLLSLRPPPCSYDGVC-VMGFNDKVLLYWFDGENFRLY----DVHR 334
            L D  N++WT K   + L P    Y  +   +G  + ++L       FRL+       R
Sbjct: 293 MLQDYHNNVWTHKIIDIPLGPKDVRYPTLAGTLGTGEILILDDHFSGCFRLFYSDMGSKR 352

Query: 333 EENFKLVIPSY-----------GTFHKKDGNGGLFDYQLCT----HAENFLSLK 217
             + K+ +PS+             F +   N G + Y        H EN L LK
Sbjct: 353 LRSAKIALPSFFGENKWKRYYANHFSQTGENNGSWLYSASIFSFHHVENILPLK 406


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