BLASTX nr result

ID: Papaver23_contig00017841 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017841
         (1380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-l...   441   e-121
gb|AFK49136.1| unknown [Lotus japonicus]                              438   e-120
ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp....   436   e-120
ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-l...   436   e-120

>ref|XP_002321194.1| predicted protein [Populus trichocarpa] gi|222861967|gb|EEE99509.1|
            predicted protein [Populus trichocarpa]
          Length = 287

 Score =  443 bits (1140), Expect = e-122
 Identities = 226/278 (81%), Positives = 251/278 (90%)
 Frame = +3

Query: 366  MVGLSSGEKHFIQGGIAQDLRSDGRKRLMYRPISIETGVIPQANGSARVRIGATEVIASV 545
            MVGLS GEKHFIQGGI Q+LRSDGRKR  YRPISIETGVIPQANGSAR+RIGATEVIASV
Sbjct: 1    MVGLSLGEKHFIQGGIDQNLRSDGRKRDAYRPISIETGVIPQANGSARIRIGATEVIASV 60

Query: 546  KAELGKPNPLQPNKGKVSIFVDCSPTAAPMFQGRGGEDLSAELSVALQRSFLGGKSGAGA 725
            KAELG+PN LQP+KGKV+IFVDCSP A PMF+GRGGE+LSAELSVALQR  LGGKSGAGA
Sbjct: 61   KAELGRPNALQPDKGKVAIFVDCSPVAEPMFEGRGGEELSAELSVALQRCLLGGKSGAGA 120

Query: 726  GINLSSLIVVEGKICWDLYIDGLVLSSDGNLLDTLGAAIKAALSDTGIPKVNVNAATSPE 905
            GI+LSSLIV EGKICWDLYIDGLV+SSDGNLLD LGAAIKAALS+TGIP+V V A  S +
Sbjct: 121  GIDLSSLIVAEGKICWDLYIDGLVISSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180

Query: 906  EPAEVDISDEELFKFETSGVPVIVTLTKVGRHYIADATSEEESQMSSAISFSINKHGHIC 1085
            E  EVDISDEE  +F+TSGVPVIVTLTKVGRHYI DATSEEESQMSSA+S SI++ G IC
Sbjct: 181  EQPEVDISDEEFMQFDTSGVPVIVTLTKVGRHYIVDATSEEESQMSSAVSVSISRKGQIC 240

Query: 1086 GLTKRGGSGLDPSVILDMLSVAKHVSEQLMMELDSKIS 1199
            GL+KRG +GLDPSVI DM+SVA+H+SEQL+ +LDS+IS
Sbjct: 241  GLSKRGSAGLDPSVISDMISVARHISEQLINKLDSEIS 278


>ref|XP_003548054.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  441 bits (1135), Expect = e-121
 Identities = 223/278 (80%), Positives = 251/278 (90%)
 Frame = +3

Query: 366  MVGLSSGEKHFIQGGIAQDLRSDGRKRLMYRPISIETGVIPQANGSARVRIGATEVIASV 545
            MVGLS GE HFIQGGIAQDLR DGRKRL YRPIS+ETGVIPQ NGSARVR+GAT+VIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 546  KAELGKPNPLQPNKGKVSIFVDCSPTAAPMFQGRGGEDLSAELSVALQRSFLGGKSGAGA 725
            KAELGKP+ LQP+KGKVSI+VDCS TA P F+GRGG++L+AELS ALQR  LGGKSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYVDCSSTAEPAFEGRGGDELAAELSNALQRCLLGGKSGAGA 120

Query: 726  GINLSSLIVVEGKICWDLYIDGLVLSSDGNLLDTLGAAIKAALSDTGIPKVNVNAATSPE 905
            GI+LSSLIVVEGKICWDLYIDGLV+SSDGNLLD LGAAIKAALS+TGIP+V V A TS +
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGTSND 180

Query: 906  EPAEVDISDEELFKFETSGVPVIVTLTKVGRHYIADATSEEESQMSSAISFSINKHGHIC 1085
            E  EVD+SDEE  +F+TS VPVIVTLTKVGRHYI DATSEEESQMSSA+S S+N+ GHIC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 1086 GLTKRGGSGLDPSVILDMLSVAKHVSEQLMMELDSKIS 1199
            G+TKRGG GLDPS+ILDM+SVAKHVSEQL+ +LDS+I+
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEIA 278


>gb|AFK49136.1| unknown [Lotus japonicus]
          Length = 286

 Score =  438 bits (1127), Expect = e-120
 Identities = 220/278 (79%), Positives = 251/278 (90%)
 Frame = +3

Query: 366  MVGLSSGEKHFIQGGIAQDLRSDGRKRLMYRPISIETGVIPQANGSARVRIGATEVIASV 545
            MVGLS GE+HFIQGGIAQDLR DGRKRL YRPI +ETGVIPQA+GSAR+R+GATEVIASV
Sbjct: 1    MVGLSLGERHFIQGGIAQDLRCDGRKRLTYRPIYVETGVIPQAHGSARIRMGATEVIASV 60

Query: 546  KAELGKPNPLQPNKGKVSIFVDCSPTAAPMFQGRGGEDLSAELSVALQRSFLGGKSGAGA 725
            KAELGKP+ LQP+KGKVSI++DCS TA P F+GRGG+DLSAELSVALQRS LG KSGAGA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDDLSAELSVALQRSLLGAKSGAGA 120

Query: 726  GINLSSLIVVEGKICWDLYIDGLVLSSDGNLLDTLGAAIKAALSDTGIPKVNVNAATSPE 905
            GI+LSSLIVVEGKICWDLYIDGLV+SSDGNLLD LGAAIKAALS+TGIP+V V A  S +
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVQVAAGASGD 180

Query: 906  EPAEVDISDEELFKFETSGVPVIVTLTKVGRHYIADATSEEESQMSSAISFSINKHGHIC 1085
            E  EV+ISD+E  +F+TSGVPVIVTLTKVGRH I DATSEEESQMSSA+S S+N+ GHIC
Sbjct: 181  EKPEVEISDDEFLQFDTSGVPVIVTLTKVGRHSIVDATSEEESQMSSAVSISVNRQGHIC 240

Query: 1086 GLTKRGGSGLDPSVILDMLSVAKHVSEQLMMELDSKIS 1199
            G+TKRG  GLDPS++LDM+SVAKHVSEQL+ +LDS+I+
Sbjct: 241  GITKRGSVGLDPSIVLDMISVAKHVSEQLINKLDSEIA 278


>ref|XP_002882547.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297328387|gb|EFH58806.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 287

 Score =  436 bits (1122), Expect = e-120
 Identities = 213/278 (76%), Positives = 251/278 (90%)
 Frame = +3

Query: 366  MVGLSSGEKHFIQGGIAQDLRSDGRKRLMYRPISIETGVIPQANGSARVRIGATEVIASV 545
            MVGLS GE+HF++GGIAQDLR+DGRKRL YRPI +ETGVIPQANGSARV+IG T+VIASV
Sbjct: 1    MVGLSLGEQHFVKGGIAQDLRTDGRKRLTYRPIYVETGVIPQANGSARVKIGGTDVIASV 60

Query: 546  KAELGKPNPLQPNKGKVSIFVDCSPTAAPMFQGRGGEDLSAELSVALQRSFLGGKSGAGA 725
            KAE+G+P+ LQP+KGKV++F+DCSPTA P F GRGGE+LS+EL++ALQR  LGGKSGAGA
Sbjct: 61   KAEIGRPSSLQPDKGKVAVFIDCSPTAEPTFGGRGGEELSSELALALQRCLLGGKSGAGA 120

Query: 726  GINLSSLIVVEGKICWDLYIDGLVLSSDGNLLDTLGAAIKAALSDTGIPKVNVNAATSPE 905
            GINLSSL++ EGK+CWDLYIDGLV+SSDGNLLD LGAAIKAAL++T IPKVNV+A  + +
Sbjct: 121  GINLSSLLIKEGKVCWDLYIDGLVISSDGNLLDALGAAIKAALTNTAIPKVNVSAEVADD 180

Query: 906  EPAEVDISDEELFKFETSGVPVIVTLTKVGRHYIADATSEEESQMSSAISFSINKHGHIC 1085
            E  E+DISDEE  +F+TS VPVIVTLTKVG HYI DAT+EEESQMSSA+S S+N+ GHIC
Sbjct: 181  EQPEIDISDEEYLQFDTSSVPVIVTLTKVGTHYIVDATAEEESQMSSAVSISVNRAGHIC 240

Query: 1086 GLTKRGGSGLDPSVILDMLSVAKHVSEQLMMELDSKIS 1199
            GLTKRGGSGLDPSVILDM+SVAKHV+E LM +LDS+IS
Sbjct: 241  GLTKRGGSGLDPSVILDMISVAKHVTENLMSKLDSEIS 278


>ref|XP_003518190.1| PREDICTED: exosome complex component RRP42-like [Glycine max]
          Length = 286

 Score =  436 bits (1120), Expect = e-120
 Identities = 219/278 (78%), Positives = 248/278 (89%)
 Frame = +3

Query: 366  MVGLSSGEKHFIQGGIAQDLRSDGRKRLMYRPISIETGVIPQANGSARVRIGATEVIASV 545
            MVGLS GE HFIQGGIAQDLR DGRKRL YRPIS+ETGVIPQ NGSARVR+GAT+VIASV
Sbjct: 1    MVGLSLGETHFIQGGIAQDLRCDGRKRLTYRPISVETGVIPQTNGSARVRMGATDVIASV 60

Query: 546  KAELGKPNPLQPNKGKVSIFVDCSPTAAPMFQGRGGEDLSAELSVALQRSFLGGKSGAGA 725
            KAELGKP+ LQP+KGKVSI++DCS TA P F+GRGG++L+AELS ALQ   LGGKSG GA
Sbjct: 61   KAELGKPSLLQPDKGKVSIYIDCSSTAEPAFEGRGGDELAAELSNALQHCLLGGKSGEGA 120

Query: 726  GINLSSLIVVEGKICWDLYIDGLVLSSDGNLLDTLGAAIKAALSDTGIPKVNVNAATSPE 905
            GI+LSSLIVVEGKICWDLYIDGLV+SSDGNLLD LGAAIKAALS+TGIP+V V A TS +
Sbjct: 121  GIDLSSLIVVEGKICWDLYIDGLVVSSDGNLLDALGAAIKAALSNTGIPRVEVAAGTSND 180

Query: 906  EPAEVDISDEELFKFETSGVPVIVTLTKVGRHYIADATSEEESQMSSAISFSINKHGHIC 1085
            E  EVD+SDEE  +F+TS VPVIVTLTKVGRHYI DATSEEESQMSS +S S+N+ GHIC
Sbjct: 181  EHPEVDVSDEEFLQFDTSRVPVIVTLTKVGRHYIVDATSEEESQMSSGVSISVNRQGHIC 240

Query: 1086 GLTKRGGSGLDPSVILDMLSVAKHVSEQLMMELDSKIS 1199
            G+TKRGG GLDPS+ILDM+SVAKHVSEQL+ +LDS+I+
Sbjct: 241  GITKRGGVGLDPSIILDMISVAKHVSEQLINKLDSEIA 278


Top