BLASTX nr result

ID: Papaver23_contig00017840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017840
         (1843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...    95   7e-17
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    91   8e-16
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    91   8e-16
ref|XP_003612169.1| F-box family protein [Medicago truncatula] g...    91   1e-15
ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arab...    87   1e-14

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score = 94.7 bits (234), Expect = 7e-17
 Identities = 90/302 (29%), Positives = 129/302 (42%), Gaps = 33/302 (10%)
 Frame = -2

Query: 1146 IVGSCHGLICFSIHCAHHIADPIYICNPNLREQISLPRFTIMARNKNNVEFKKTTYLDGE 967
            +VGSC+GL+C S    +   D +YI NP       LP              K   Y D E
Sbjct: 123  VVGSCNGLLCLSDSLFN---DSLYIYNPFTGRYKELP--------------KSLQYPDQE 165

Query: 966  IVSGFGYNSVTDEYKVVRIYY---AAGRLGSEQ----PKGQVQVYTLGSGSGWRNKGEIS 808
            +V GFG+N  T+EYKV+RI Y     GR    +    P  QVQ+ TLG   GWR+ G++S
Sbjct: 166  VVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLGC-PGWRSLGKVS 224

Query: 807  YSLQCYDYCPTVHSNRRRYRYNDLKMIYSPCRGILANGALHWLDQEW------NIVAFEL 646
            Y L            RR                 L NG LHW+ +         +V+F+L
Sbjct: 225  YRLV-----------RR-------------ASETLVNGRLHWVSRPCRNKPARRLVSFDL 260

Query: 645  AEEKFSLLPPPPCVHPGVNNV-FTLQVLEGRLCIADGHSSSHLYIWSFKKEISK--WELT 475
             +E+F  +P P C   G+N   + L VL G L +A   +   L IW  K+   K  W   
Sbjct: 261  TDEQFREVPKPDC--GGLNRCDYHLAVLRGCLSVAVYCNYGRLEIWVMKEYNVKESWVKE 318

Query: 474  YCLSCRSDEFM--DLYWPISL---------------TLSGKLLLRSNYETLICYDPQTRE 346
            Y +     + +  +L  P+ +                 +G++LL      L+ YDP+  +
Sbjct: 319  YNIGAYMPKGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPKKGK 378

Query: 345  FK 340
            FK
Sbjct: 379  FK 380


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
            gi|222861279|gb|EEE98821.1| f-box family protein [Populus
            trichocarpa]
          Length = 422

 Score = 91.3 bits (225), Expect = 8e-16
 Identities = 89/302 (29%), Positives = 127/302 (42%), Gaps = 33/302 (10%)
 Frame = -2

Query: 1146 IVGSCHGLICFSIHCAHHIADPIYICNPNLREQISLPRFTIMARNKNNVEFKKTTYLDGE 967
            +VGSC+GL+C S    +   D +YI NP       LP              K   Y D E
Sbjct: 124  VVGSCNGLLCLSDSLYN---DSLYIYNPFTGCYKELP--------------KSLQYPDQE 166

Query: 966  IVSGFGYNSVTDEYKVVRI-YYAAGRLGSEQ------PKGQVQVYTLGSGSGWRNKGEIS 808
            +VSGFG+N  T EYKV+RI YY  G  G  +      P  +VQ+ TLG    WR+ G++S
Sbjct: 167  VVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLGCPE-WRSLGKVS 225

Query: 807  YSLQCYDYCPTVHSNRRRYRYNDLKMIYSPCRGILANGALHWLDQEW------NIVAFEL 646
            Y L            RR               G L NG LHW+ +         +V+F+L
Sbjct: 226  YRLV-----------RR-------------ASGALVNGRLHWISRPCRNKPARRLVSFDL 261

Query: 645  AEEKFSLLPPPPCVHPGVNNV-FTLQVLEGRLCIADGHSSSHLYIWSFKKEISK--WELT 475
             +E+F  +  P C   G+N   + L VL G L  A   +   L IW  K+   K  W   
Sbjct: 262  TDEQFREVSKPDC--GGLNRCNYHLVVLRGCLSAAVYCNYGRLEIWVMKEYNVKESWVKE 319

Query: 474  YCLSC--------RSDEFMDLY---------WPISLTLSGKLLLRSNYETLICYDPQTRE 346
            Y +            D  + ++           + +  +G++LL      L+ YDP+  +
Sbjct: 320  YNIGAYMPKGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKNGK 379

Query: 345  FK 340
            FK
Sbjct: 380  FK 381


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
            gi|147785390|emb|CAN68678.1| hypothetical protein
            VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 91.3 bits (225), Expect = 8e-16
 Identities = 87/300 (29%), Positives = 132/300 (44%), Gaps = 31/300 (10%)
 Frame = -2

Query: 1146 IVGSCHGLICFSIHCAHHIADPIYICNPNLREQISLPRFTIMARNKNNVEFKKTTYLDGE 967
            +VGSC+GL+C +        D +Y+ NP  R+   LP              K   Y D E
Sbjct: 124  VVGSCNGLLCLADSL---FKDAVYVHNPFTRDFKQLP--------------KSLQYPDQE 166

Query: 966  IVSGFGYNSVTDEYKVVR-IYYAAGRLGSEQ------PKGQVQVYTLGSGSGWRNKGEIS 808
            +V GFGY+ +T+ YKVV+ +YY  G  G  +       + +VQV TLGS + WR+ G++S
Sbjct: 167  VVFGFGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVS 225

Query: 807  YSLQCYDYCPTVHSNRRRYRYNDLKMIYSPCRGILANGALHWLDQEWN-----IVAFELA 643
            Y L   D  P+                       L NG LHW+ +        IV+F+LA
Sbjct: 226  YQL---DRWPS---------------------EALVNGRLHWVTRPRRYVTRFIVSFDLA 261

Query: 642  EEKFSLLPPPPCVHPGVNNVFTLQVLEGRLCIADGHSSSHLYIWSFKKEISK--WELTYC 469
            +E+F  +P P C      N + L VL G L  A   S+  L +W  K+   K  W   + 
Sbjct: 262  DEQFREIPKPDCGGLSRCN-YHLLVLGGCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFN 320

Query: 468  LSCRSDEFM--DLYWP---------------ISLTLSGKLLLRSNYETLICYDPQTREFK 340
            +     + +  D+  P               + L  +G++LL      L+ Y+P+  +FK
Sbjct: 321  IGAHLPKGLKQDVNRPHRIWRNAPKGRGVRLLCLLKNGEILLEYKGRVLVSYNPERGKFK 380


>ref|XP_003612169.1| F-box family protein [Medicago truncatula]
            gi|355513504|gb|AES95127.1| F-box family protein
            [Medicago truncatula]
          Length = 1154

 Score = 90.9 bits (224), Expect = 1e-15
 Identities = 90/317 (28%), Positives = 143/317 (45%), Gaps = 8/317 (2%)
 Frame = -2

Query: 1170 KKHWGTSAIVGSCHGLICFSIHCAHHIADPIYICNPNLREQISLPRFTIMARNKNNVEFK 991
            K ++    +  SC+GL+C       H   P+ ICNP   E I LP  TI     N  + +
Sbjct: 846  KPYYDKFGVANSCNGLLCLCCPSDEH---PLSICNPVTGEFIKLPEATI-----NTHDER 897

Query: 990  KTTYLDGEIVSGFGYNSVTDEYKVVRIYYAAGRLGSEQ--PKGQVQVYTLGSGSGWRNKG 817
                + G++  GFG+   T+EYKV+RI+ +  + G+     +  +++YTLG+ S WRN  
Sbjct: 898  SPLNMRGQV--GFGFQPKTNEYKVIRIWGSDVKRGNRWVFDRMVLEIYTLGTPS-WRN-A 953

Query: 816  EISYSLQCYDYCPTVHSNRRRYRYNDLKMIYSPCRGILANGALHWL---DQEWNIVAFEL 646
            E+   +       ++ SN        + + Y  C     NG +HW+    QE +I+ F L
Sbjct: 954  EVDPQI-------SIGSN--------IWLRYPTC----VNGTIHWIRFKGQERSILCFCL 994

Query: 645  AEEKFSLLPPPPCVHPGVNNVFTLQVLEGRLCIADGHSSSHLYI--WSFKKEISKWELT- 475
              E+    P PP V    NN F         CI  G     LYI   SF ++++ W +  
Sbjct: 995  ENERLQSFPSPP-VLQNQNNGF-----RHNECIRIGELRGLLYICDTSFFRDVAMWVMNE 1048

Query: 474  YCLSCRSDEFMDLYWPISLTLSGKLLLRSNYETLICYDPQTREFKKHMNLITNTFFDHDD 295
            Y +     +  ++   +S      +LL  +   LI Y+P+   FK      T++ F    
Sbjct: 1049 YGIGESWTKVYNIDTLVSPLEGAAILLYHSCNCLIYYEPEKLGFKVFRIQGTSSEF---- 1104

Query: 294  HPLIEAIPHMNSFVSLK 244
               +E IPH+ S +SLK
Sbjct: 1105 ---VEIIPHVPSLISLK 1118


>ref|XP_002867770.1| hypothetical protein ARALYDRAFT_329378 [Arabidopsis lyrata subsp.
            lyrata] gi|297313606|gb|EFH44029.1| hypothetical protein
            ARALYDRAFT_329378 [Arabidopsis lyrata subsp. lyrata]
          Length = 406

 Score = 87.4 bits (215), Expect = 1e-14
 Identities = 82/300 (27%), Positives = 140/300 (46%), Gaps = 15/300 (5%)
 Frame = -2

Query: 1194 KIVNHPHIKKHWGTSAIVGSCHGLICFSIHCAHHIADPIYICNPNLREQISLPRFTIMAR 1015
            K+ +  H  K  G + + GSC+GLI  S     +    I I NP+ R+   LP       
Sbjct: 75   KVTDVEHPLKTGGLTEVFGSCNGLIGLS-----NSPTDIAIFNPSTRQIHRLPA------ 123

Query: 1014 NKNNVEFKKTTYLDGEIVSGFGYNSVTDEYKVVRIYYAAGRLGSEQPKG---QVQVYTLG 844
               +V+F + +   G +  GFGY+SV D+YKVVR+    G    E   G   +++V++L 
Sbjct: 124  --ESVDFPEGSTTRGYVFYGFGYDSVNDDYKVVRMVQCKGGKADELVFGFPYEIKVFSLK 181

Query: 843  SGSGWRNKGEISYSLQCYDYCPTVHSNRRRYRYNDLKMIYSPCRGILANGALHWLDQE-- 670
              S W+    +  ++Q   Y          + Y+   ++Y    G+LA+ +LHW+     
Sbjct: 182  KNS-WKRITRVIPAIQLLFY----------FYYH---LLYRRGYGVLASNSLHWVLPRRP 227

Query: 669  ----WN-IVAFELAEEKFSLLP-PPPCVHPGVNNVFTLQVLEGRLCIADGHSSSHLYIW- 511
                +N I+ F+L  E+F +L  P    H  ++    + VL+G LC+   H  S++ +W 
Sbjct: 228  GLIAFNAIIRFDLDTEEFGILDFPEDLAHENID----IGVLDGCLCLMCNHEFSYVDVWI 283

Query: 510  --SFKKEISKWELTYCLSCRSDEFMDLYWPISLTLS-GKLLLRSNYETLICYDPQTREFK 340
               +K E S  +L      +S E  D   P+  +    K+LL  N   L+ +D +++ F+
Sbjct: 284  MKEYKVEGSWSKLFRVPKPKSVESFDFMRPLLYSKERDKILLEINNAKLVWFDLKSKRFR 343


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