BLASTX nr result

ID: Papaver23_contig00017760 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017760
         (925 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana] ...   225   1e-56
ref|XP_002533997.1| KOM, putative [Ricinus communis] gi|22352600...   224   2e-56
ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arab...   222   8e-56
emb|CBI16118.3| unnamed protein product [Vitis vinifera]              220   3e-55
ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Viti...   220   3e-55

>ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
           gi|110737035|dbj|BAF00472.1| hypothetical protein
           [Arabidopsis thaliana] gi|330253108|gb|AEC08202.1|
           protein RHOMBOID-like 1 [Arabidopsis thaliana]
          Length = 389

 Score =  225 bits (574), Expect = 1e-56
 Identities = 118/212 (55%), Positives = 138/212 (65%)
 Frame = -3

Query: 923 GGSLLSALFIRSSISVXXXXXXXXXXXXXXSELITNWTIYANKFAALLTLVVIIAINLAV 744
           GGSLLS+LF R+ ISV              SEL+TNWTIYANKFAALLTL+ IIAINLAV
Sbjct: 178 GGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAV 237

Query: 743 GILPHVDNFAHIXXXXXXXXXXXXXLMRPQFGWVNQRNVPPRIAAAYSAKTKHKTYQYVL 564
           GILPHVDNFAH+             L+RPQ+G+ NQRN  PR  AA SAK+KHK YQYVL
Sbjct: 238 GILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRN-NPRGYAAPSAKSKHKPYQYVL 296

Query: 563 WVTAXXXXXXXXXXXXXXXXXXFDGNKHCSWCHYMSCIPTKRWSCNNDPVTCMSSQSLNQ 384
           W+T+                   D NKHCSWCHY+SCIPT  WSC +  V C SSQ   Q
Sbjct: 297 WITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCKSQNVYCESSQIGQQ 356

Query: 383 LNLTCSNNGKTNTYQMSNATDNQIRQLCAQLC 288
           +NLTC  NGKT  Y++SN   ++I+QLC+QLC
Sbjct: 357 MNLTCITNGKTEMYKLSNDIPSRIQQLCSQLC 388


>ref|XP_002533997.1| KOM, putative [Ricinus communis] gi|223526008|gb|EEF28386.1| KOM,
           putative [Ricinus communis]
          Length = 229

 Score =  224 bits (572), Expect = 2e-56
 Identities = 110/212 (51%), Positives = 139/212 (65%)
 Frame = -3

Query: 923 GGSLLSALFIRSSISVXXXXXXXXXXXXXXSELITNWTIYANKFAALLTLVVIIAINLAV 744
           GGSL+S+LFI+++ISV              SELITNWTIY NK AA +TL++IIAINLAV
Sbjct: 18  GGSLMSSLFIQTNISVGASGALFGLLGAMLSELITNWTIYTNKVAAFVTLLIIIAINLAV 77

Query: 743 GILPHVDNFAHIXXXXXXXXXXXXXLMRPQFGWVNQRNVPPRIAAAYSAKTKHKTYQYVL 564
           GILPHVDNFAHI             L+RPQFGWV+QR VPP  + A S K K K YQ +L
Sbjct: 78  GILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQRYVPPGYSPA-SVKPKFKAYQRIL 136

Query: 563 WVTAXXXXXXXXXXXXXXXXXXFDGNKHCSWCHYMSCIPTKRWSCNNDPVTCMSSQSLNQ 384
           W+ +                   D N HCSWCHY+SC+PT RWSCN +P +C+SSQ  +Q
Sbjct: 137 WIISLIVVVAGLTLGLVLLLRGVDANDHCSWCHYLSCVPTSRWSCNTEPASCLSSQMGSQ 196

Query: 383 LNLTCSNNGKTNTYQMSNATDNQIRQLCAQLC 288
           LN+TC+ NGK++ Y++ +AT++QI  LC QLC
Sbjct: 197 LNVTCTTNGKSSVYRLPDATNSQIEGLCTQLC 228


>ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
           lyrata] gi|297325037|gb|EFH55457.1| hypothetical protein
           ARALYDRAFT_481823 [Arabidopsis lyrata subsp. lyrata]
          Length = 387

 Score =  222 bits (566), Expect = 8e-56
 Identities = 116/212 (54%), Positives = 137/212 (64%)
 Frame = -3

Query: 923 GGSLLSALFIRSSISVXXXXXXXXXXXXXXSELITNWTIYANKFAALLTLVVIIAINLAV 744
           GGSLLS+LF R+ ISV              SEL+TNWTIYANKFAALLTL+ IIAINLAV
Sbjct: 176 GGSLLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAV 235

Query: 743 GILPHVDNFAHIXXXXXXXXXXXXXLMRPQFGWVNQRNVPPRIAAAYSAKTKHKTYQYVL 564
           GILPHVDNFAH+             L+RPQ+G+ NQRN  PR  AA SAK+KHK YQYVL
Sbjct: 236 GILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRN-NPRSYAAPSAKSKHKPYQYVL 294

Query: 563 WVTAXXXXXXXXXXXXXXXXXXFDGNKHCSWCHYMSCIPTKRWSCNNDPVTCMSSQSLNQ 384
           W+T+                   D NKHCSWCHY+SCIPT  WSC +    C SSQ   Q
Sbjct: 295 WITSLLLLIAGYTVGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSCKSQNDYCESSQIGQQ 354

Query: 383 LNLTCSNNGKTNTYQMSNATDNQIRQLCAQLC 288
           +NLTC  NGKT  Y++SN   ++++QLC+QLC
Sbjct: 355 MNLTCIANGKTEMYKLSNDIPSRVQQLCSQLC 386


>emb|CBI16118.3| unnamed protein product [Vitis vinifera]
          Length = 316

 Score =  220 bits (561), Expect = 3e-55
 Identities = 112/212 (52%), Positives = 135/212 (63%)
 Frame = -3

Query: 923 GGSLLSALFIRSSISVXXXXXXXXXXXXXXSELITNWTIYANKFAALLTLVVIIAINLAV 744
           GGS+LS+LFI+SSISV              SELITNWTIYANKFAALLTL++II +NLAV
Sbjct: 105 GGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAV 164

Query: 743 GILPHVDNFAHIXXXXXXXXXXXXXLMRPQFGWVNQRNVPPRIAAAYSAKTKHKTYQYVL 564
           GILPHVDNFAHI             L+RPQFGWV+QRN  P   A  S K KHK YQYVL
Sbjct: 165 GILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAP-SVKPKHKMYQYVL 223

Query: 563 WVTAXXXXXXXXXXXXXXXXXXFDGNKHCSWCHYMSCIPTKRWSCNNDPVTCMSSQSLNQ 384
           WV +                    GN  CSWCHY+SC+PT +WSC +  V C S+   NQ
Sbjct: 224 WVMSLILLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQ 283

Query: 383 LNLTCSNNGKTNTYQMSNATDNQIRQLCAQLC 288
           LNLTC +NG++N Y + +   +Q++QLC+QLC
Sbjct: 284 LNLTCLSNGRSNIYLLPDDNTSQVQQLCSQLC 315


>ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
          Length = 391

 Score =  220 bits (561), Expect = 3e-55
 Identities = 112/212 (52%), Positives = 135/212 (63%)
 Frame = -3

Query: 923 GGSLLSALFIRSSISVXXXXXXXXXXXXXXSELITNWTIYANKFAALLTLVVIIAINLAV 744
           GGS+LS+LFI+SSISV              SELITNWTIYANKFAALLTL++II +NLAV
Sbjct: 180 GGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAV 239

Query: 743 GILPHVDNFAHIXXXXXXXXXXXXXLMRPQFGWVNQRNVPPRIAAAYSAKTKHKTYQYVL 564
           GILPHVDNFAHI             L+RPQFGWV+QRN  P   A  S K KHK YQYVL
Sbjct: 240 GILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAP-SVKPKHKMYQYVL 298

Query: 563 WVTAXXXXXXXXXXXXXXXXXXFDGNKHCSWCHYMSCIPTKRWSCNNDPVTCMSSQSLNQ 384
           WV +                    GN  CSWCHY+SC+PT +WSC +  V C S+   NQ
Sbjct: 299 WVMSLILLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSCKSQQVYCESTTIGNQ 358

Query: 383 LNLTCSNNGKTNTYQMSNATDNQIRQLCAQLC 288
           LNLTC +NG++N Y + +   +Q++QLC+QLC
Sbjct: 359 LNLTCLSNGRSNIYLLPDDNTSQVQQLCSQLC 390


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