BLASTX nr result

ID: Papaver23_contig00017744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017744
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]    62   1e-07
ref|NP_175148.1| F-box protein [Arabidopsis thaliana] gi|7516903...    59   1e-06
ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana] g...    58   2e-06
ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arab...    58   2e-06
ref|XP_002894040.1| hypothetical protein ARALYDRAFT_891511 [Arab...    57   3e-06

>emb|CAN83390.1| hypothetical protein VITISV_041404 [Vitis vinifera]
          Length = 322

 Score = 62.0 bits (149), Expect = 1e-07
 Identities = 46/192 (23%), Positives = 93/192 (48%), Gaps = 6/192 (3%)
 Frame = +1

Query: 7   VYNPITGYSMKLPNLEYTAPQRNIYNVQLAYDSIMGKFKVLCLCFGDHEQRDNYF---FK 177
           V NP+ G  + LP     +   ++    L +DS + K+K++ + F D +     +    +
Sbjct: 73  VSNPLRGELLMLPESTVMSRWPHLDRYGLGFDSSIKKYKIVHVFFRDFDWAKRGYRLGAE 132

Query: 178 IVTLGVESETWRDLVVPKSYPRLHDDYLPMFSSGSLYWLTHHRNEGNSSDNQRNILAFDV 357
           + T+G  S +WR++     YP        +++SG+L+WL ++  E N  + +  +++F++
Sbjct: 133 VYTVGTTS-SWREISQIPCYPLYK---RAVYASGALHWLVNY--EFNPDNLKSMVISFNI 186

Query: 358 SKETFYTI---MYPKGAFNDCKLLEMDGSLCFLDYVSMGKLRLWVLKEDKEKQNNQHREY 528
             E F +I    +P       +L+++ G L  +D+     + +W LK+ ++K        
Sbjct: 187 KDEEFNSIPHQEFPSKVSKWFELVDLRGYLGMVDFSLGTHIEIWKLKDYEKK-------- 238

Query: 529 EWVENYNVDNMP 564
           EWV  Y +D  P
Sbjct: 239 EWVREYRIDIKP 250


>ref|NP_175148.1| F-box protein [Arabidopsis thaliana]
           gi|75169030|sp|Q9C629.1|FB35_ARATH RecName:
           Full=Putative F-box protein At1g46840
           gi|12321007|gb|AAG50625.1|AC083835_10 hypothetical
           protein [Arabidopsis thaliana]
           gi|332194009|gb|AEE32130.1| F-box protein [Arabidopsis
           thaliana]
          Length = 475

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 1/172 (0%)
 Frame = +1

Query: 7   VYNPITGYSMKLPNLEYTAPQRNIYNVQLAYDSIMGKFKVLCLCFGDHEQRDNYFFKIVT 186
           ++NP T   + LP LE   P+   +N   AYD    +FKVLC+   + +Q  +Y ++++T
Sbjct: 149 IWNPCTRQLITLPKLE---PENLDFNSFFAYDPTEKQFKVLCMTVVNKQQTTSYKYQVLT 205

Query: 187 LGVESETWRDLVVPKSYPRLHDDYLPMFSSGSLYWLTHHRNEGNSSDNQRNILAFDVSKE 366
           LG     WR++  P  Y         +  +G LY++      G    +   I+ FDVS E
Sbjct: 206 LGTGPLLWRNIECPFMYRLRDKSNRGICINGVLYFI------GWIKCSTMIIICFDVSSE 259

Query: 367 TFYTIMYPKGAFNDCKLLEMDGSL-CFLDYVSMGKLRLWVLKEDKEKQNNQH 519
            F  I   + AF    L+   G L  +L      +  +WVL + K    ++H
Sbjct: 260 KFSFIKI-ENAF-IVTLINYRGKLGVYLVVYGSPRGEVWVLDDTKNDNWSKH 309


>ref|NP_195598.1| putative F-box protein [Arabidopsis thaliana]
           gi|75266820|sp|Q9T0J4.1|FB249_ARATH RecName:
           Full=Putative F-box protein At4g38870
           gi|4490339|emb|CAB38621.1| putative protein [Arabidopsis
           thaliana] gi|7270870|emb|CAB80550.1| putative protein
           [Arabidopsis thaliana] gi|332661585|gb|AEE86985.1|
           putative F-box protein [Arabidopsis thaliana]
          Length = 426

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 45/171 (26%), Positives = 79/171 (46%), Gaps = 9/171 (5%)
 Frame = +1

Query: 7   VYNPITGYSMKLPNLEYTAPQRNIYNVQLAYDSIMGKFKVLCLCFGDHEQRDN----YFF 174
           +YNP T  S+ LP ++     R   N  + YD + G +KV+C+  G    R+        
Sbjct: 172 IYNPCTRRSITLPKIK---AGRRAINQYIGYDPLDGNYKVVCITRGMPMLRNRRGLAEEI 228

Query: 175 KIVTLGVESETWR---DLVVPKSYPRLHDDYLPMFSSGSLYWLTHHRNEGNSSDNQRNIL 345
           +++TLG    +WR   D++ P S         P+     +  + ++R    +  N+  I+
Sbjct: 229 QVLTLGTRDSSWRMIHDIIPPHS---------PVSEELCINGVLYYRAFIGTKLNESAIM 279

Query: 346 AFDVSKETFYTIMYPKGAFNDCKLLEMDGSLC--FLDYVSMGKLRLWVLKE 492
           +FDV  E F  I  P    +  KL + +G L   F +  + G + LW+L++
Sbjct: 280 SFDVRSEKFDLIKVPCNFRSFSKLAKYEGKLAVIFYEKKTSGIIGLWILED 330


>ref|XP_002874089.1| hypothetical protein ARALYDRAFT_910273 [Arabidopsis lyrata subsp.
           lyrata] gi|297319926|gb|EFH50348.1| hypothetical protein
           ARALYDRAFT_910273 [Arabidopsis lyrata subsp. lyrata]
          Length = 393

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 56/191 (29%), Positives = 85/191 (44%), Gaps = 13/191 (6%)
 Frame = +1

Query: 7   VYNPITGYSMKLPNLEYTAPQRNIYNVQLAYDSIMGKFKVLCLCFGD---------HEQR 159
           V NP T   +KLP++E     R++Y  +L YD +  ++KVLC+ F D           Q 
Sbjct: 136 VCNPTTRQIVKLPDVESNG--RHVY-ARLGYDPVEDQYKVLCVMFYDPYSAKCKRQGTQP 192

Query: 160 DNYFFKIVTLGVESETWRDLVVPKSYPRLHDDYLPMFSSGSLYWLTHHRNEGNSSDNQRN 339
           + Y F   TL  + + WR + + +       D   +   G++Y+           D +  
Sbjct: 193 EPYVF---TLQSQQKEWRKIEITQGVAYRSVDG-GICIDGAIYF----------GDGRSR 238

Query: 340 ILAFDVSKETFYTIMYPKGAF----NDCKLLEMDGSLCFLDYVSMGKLRLWVLKEDKEKQ 507
           I+ FDV  ET   I  P+ +     +D  LL  +G L  +DY    +  LW+L ED EKQ
Sbjct: 239 IVRFDVRSETLELIQAPENSLITETSDSALLNYNGKLGGVDYNYTRETILWIL-EDAEKQ 297

Query: 508 NNQHREYEWVE 540
                  EW E
Sbjct: 298 -------EWSE 301


>ref|XP_002894040.1| hypothetical protein ARALYDRAFT_891511 [Arabidopsis lyrata subsp.
           lyrata] gi|297339882|gb|EFH70299.1| hypothetical protein
           ARALYDRAFT_891511 [Arabidopsis lyrata subsp. lyrata]
          Length = 309

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 61/198 (30%), Positives = 93/198 (46%), Gaps = 9/198 (4%)
 Frame = +1

Query: 13  NPITGYSMKLPNLEYTAPQRNIYNVQLAYDSIMGKFKVLCL---CFGDHEQRDNYFFKIV 183
           NPITG    LP   Y    R  Y+  L +D I  ++KVLC+   C  +H        KI+
Sbjct: 40  NPITGRYASLP---YLYRYRRAYSF-LGFDPIDKQYKVLCMAYPCCPNHH-------KIM 88

Query: 184 TLGVESETWRDLVVPKSYPRLHDDYLPMFSSGSLYWLTHHRNEGNSSD--NQRNILAFDV 357
           TLG    +WR +     +  + +    +   G LY+L      G++S+  N+  I+ FDV
Sbjct: 89  TLGTGEMSWRRIKCSLRHENVSEG---ICIDGVLYYL------GDTSERLNKFVIVCFDV 139

Query: 358 SKETFYTIMYPKGAFNDCKLLEMDGSLCFLDYVSMG----KLRLWVLKEDKEKQNNQHRE 525
             E F   +YP+   + C+L+   G L  + Y        +LRLWVL ED EKQ      
Sbjct: 140 MSEKF-KFIYPE---SFCELINYKGKLGVIYYDDYDDDAIELRLWVL-EDAEKQEWLEYA 194

Query: 526 YEWVENYNVDNMPSLSGL 579
           Y   ++  +D+  S+ G+
Sbjct: 195 YTLRDDKFLDHYVSVVGV 212


Top