BLASTX nr result

ID: Papaver23_contig00017717 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017717
         (627 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...   141   1e-31
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...   139   3e-31
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis...   139   3e-31
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me...   139   3e-31
ref|XP_002307496.1| predicted protein [Populus trichocarpa] gi|3...   139   6e-31

>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score =  141 bits (355), Expect = 1e-31
 Identities = 75/95 (78%), Positives = 75/95 (78%)
 Frame = +1

Query: 46  AEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXX 225
           AEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILG            
Sbjct: 3   AEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEID 62

Query: 226 XXXXXXXXRTTKRTVPFLFVRGDGVILVSPPLRTA 330
                   RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 63  DETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score =  139 bits (351), Expect = 3e-31
 Identities = 74/94 (78%), Positives = 74/94 (78%)
 Frame = +1

Query: 49  EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXX 228
           EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILG             
Sbjct: 4   EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDD 63

Query: 229 XXXXXXXRTTKRTVPFLFVRGDGVILVSPPLRTA 330
                  RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 64  ETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
           gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
           [Ricinus communis]
          Length = 97

 Score =  139 bits (351), Expect = 3e-31
 Identities = 74/94 (78%), Positives = 74/94 (78%)
 Frame = +1

Query: 49  EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXX 228
           EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILG             
Sbjct: 4   EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDD 63

Query: 229 XXXXXXXRTTKRTVPFLFVRGDGVILVSPPLRTA 330
                  RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 64  ETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
           gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
           protein LSm3 [Medicago truncatula]
          Length = 98

 Score =  139 bits (351), Expect = 3e-31
 Identities = 74/94 (78%), Positives = 74/94 (78%)
 Frame = +1

Query: 49  EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXXX 228
           EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILG             
Sbjct: 5   EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDD 64

Query: 229 XXXXXXXRTTKRTVPFLFVRGDGVILVSPPLRTA 330
                  RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 65  ETYEEIVRTTKRTVPFLFVRGDGVILVSPPLRTA 98


>ref|XP_002307496.1| predicted protein [Populus trichocarpa]
           gi|359493111|ref|XP_002266320.2| PREDICTED: U6
           snRNA-associated Sm-like protein LSm3-like isoform 1
           [Vitis vinifera] gi|222856945|gb|EEE94492.1| predicted
           protein [Populus trichocarpa]
          Length = 97

 Score =  139 bits (349), Expect = 6e-31
 Identities = 73/95 (76%), Positives = 75/95 (78%)
 Frame = +1

Query: 46  AEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGXXXXXXXXXXXX 225
           +EEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILG            
Sbjct: 3   SEEESAVKEPLDLIRLSLDERIYVKLRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEID 62

Query: 226 XXXXXXXXRTTKRTVPFLFVRGDGVILVSPPLRTA 330
                   RTT+RTVPFLFVRGDGVILVSPPLRTA
Sbjct: 63  DETYEEIVRTTRRTVPFLFVRGDGVILVSPPLRTA 97


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