BLASTX nr result

ID: Papaver23_contig00017704 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017704
         (652 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ86068.1| unknown [Medicago truncatula] gi|388493280|gb|AFK...    66   7e-09
gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK4380...    57   3e-06
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...    57   3e-06
ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis...    57   3e-06
ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Me...    57   3e-06

>gb|ACJ86068.1| unknown [Medicago truncatula] gi|388493280|gb|AFK34706.1| unknown
           [Medicago truncatula]
          Length = 110

 Score = 65.9 bits (159), Expect = 7e-09
 Identities = 27/46 (58%), Positives = 32/46 (69%)
 Frame = -1

Query: 397 LSCP*WWRN*NHTISPNKKKWNCSLGSPNYLLICFIINFNCSNDFF 260
           L  P WWRN  H ISPNK++WNC L SP+   +C IINFN  N+FF
Sbjct: 2   LCSPQWWRNQYHAISPNKQEWNCPLCSPDNFFVCLIINFNSCNNFF 47


>gb|AFK35032.1| unknown [Lotus japonicus] gi|388511495|gb|AFK43809.1| unknown
           [Lotus japonicus]
          Length = 97

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 314 RTTKRTVPFLFVRGDGVILVSPPLRTA 394
           RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71  RTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
           gi|255626487|gb|ACU13588.1| unknown [Glycine max]
          Length = 97

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 314 RTTKRTVPFLFVRGDGVILVSPPLRTA 394
           RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71  RTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_002532432.1| snrnp sm protein, putative [Ricinus communis]
           gi|223527852|gb|EEF29947.1| snrnp sm protein, putative
           [Ricinus communis]
          Length = 97

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 314 RTTKRTVPFLFVRGDGVILVSPPLRTA 394
           RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 71  RTTKRTVPFLFVRGDGVILVSPPLRTA 97


>ref|XP_003607812.1| U6 snRNA-associated Sm-like protein LSm3 [Medicago truncatula]
           gi|355508867|gb|AES90009.1| U6 snRNA-associated Sm-like
           protein LSm3 [Medicago truncatula]
          Length = 98

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 27/27 (100%), Positives = 27/27 (100%)
 Frame = +2

Query: 314 RTTKRTVPFLFVRGDGVILVSPPLRTA 394
           RTTKRTVPFLFVRGDGVILVSPPLRTA
Sbjct: 72  RTTKRTVPFLFVRGDGVILVSPPLRTA 98


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