BLASTX nr result

ID: Papaver23_contig00017701 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017701
         (1970 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29641.3| unnamed protein product [Vitis vinifera]              228   e-112
ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247...   224   e-111
ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containin...   228   e-108
ref|NP_001241852.1| RGH3 splicing factor [Zea mays] gi|330470888...   224   e-107
ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, pu...   223   e-107

>emb|CBI29641.3| unnamed protein product [Vitis vinifera]
          Length = 875

 Score =  228 bits (581), Expect(2) = e-112
 Identities = 114/164 (69%), Positives = 133/164 (81%), Gaps = 2/164 (1%)
 Frame = -1

Query: 1325 RQVEND-ELSEDEGWEYVEEGPAEIIWQGNEIIVKKKTVRVPKKNNDQQL-VIEDKERPT 1152
            ++VE + EL+ED+ WEY E GPAEIIWQGNEIIVKKK VR+ KK+ DQ     ED ERPT
Sbjct: 101  KEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEEDTERPT 159

Query: 1151 SNPLPPQSEVFASYKNSAAVSSQGVFDSVAQETPNFGTEQDKANCPFHIKTGACRFGSRC 972
            SNPLPPQSE F+ + N++ +SSQ +F  V+++ PNFGTEQDK +CPFHIKTGACRFG RC
Sbjct: 160  SNPLPPQSEAFSDH-NASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTGACRFGQRC 218

Query: 971  SRVHYYPDKSCTLLIKNMYNGPGLAWEQDEGLEVHFGGESTFWS 840
            SRVH+YPDKSCTLLIKNMYNGPGLAWEQDEGLE  F     +WS
Sbjct: 219  SRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE-KFISRFIWWS 261



 Score =  205 bits (522), Expect(2) = e-112
 Identities = 105/192 (54%), Positives = 123/192 (64%), Gaps = 5/192 (2%)
 Frame = -2

Query: 817 IYRSSLIYSWEFSVSWAMEQ-----TDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNG 653
           I+ SS  + W   + W   +     TD           EDV TEFLKFGEIVNFKVCRNG
Sbjct: 258 IWWSSWFWPW---LGWTCRRQNPLYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNG 314

Query: 652 SFHLRGNVYVHYKSLESAILAYRSLNGRYFASKQHVCTGC*QITCEYVGVTKWRVAICGE 473
           SFHLRGNVYVHYKSL+SA+LAY S+NG Y+A K        Q+TCE+VGVT+W+VAICGE
Sbjct: 315 SFHLRGNVYVHYKSLDSAVLAYHSINGLYYAGK--------QVTCEFVGVTRWKVAICGE 366

Query: 472 YMRSRLTTCSRGTACNFIHCFRNPSGDYXXXXXXXXXXXXXXXKMAYLFGASGENGYDKH 293
           YM+SR  TCS GTACNFIHCFRNP GDY                M  LFG + E+GYDK 
Sbjct: 367 YMKSRFKTCSHGTACNFIHCFRNPGGDYEWADWDKPPPRYWVKNMVALFGLTDESGYDKE 426

Query: 292 VVPESWGKQEGS 257
           V  ES G++  +
Sbjct: 427 VKQESMGRRRST 438


>ref|XP_002268270.1| PREDICTED: uncharacterized protein LOC100247160 [Vitis vinifera]
          Length = 887

 Score =  224 bits (571), Expect(2) = e-111
 Identities = 110/161 (68%), Positives = 129/161 (80%), Gaps = 10/161 (6%)
 Frame = -1

Query: 1325 RQVEND-ELSEDEGWEYVEEGPAEIIWQGNEIIVKKKTVRVPKKNNDQQ---------LV 1176
            ++VE + EL+ED+ WEY E GPAEIIWQGNEIIVKKK VR+ KK+ DQ            
Sbjct: 96   KEVEKENELNEDDDWEYAE-GPAEIIWQGNEIIVKKKRVRIAKKDVDQHSRKEVLLRLFQ 154

Query: 1175 IEDKERPTSNPLPPQSEVFASYKNSAAVSSQGVFDSVAQETPNFGTEQDKANCPFHIKTG 996
            + D ERPTSNPLPPQSE F+ + N++ +SSQ +F  V+++ PNFGTEQDK +CPFHIKTG
Sbjct: 155  LYDTERPTSNPLPPQSEAFSDH-NASIISSQQLFADVSEQIPNFGTEQDKDHCPFHIKTG 213

Query: 995  ACRFGSRCSRVHYYPDKSCTLLIKNMYNGPGLAWEQDEGLE 873
            ACRFG RCSRVH+YPDKSCTLLIKNMYNGPGLAWEQDEGLE
Sbjct: 214  ACRFGQRCSRVHFYPDKSCTLLIKNMYNGPGLAWEQDEGLE 254



 Score =  206 bits (525), Expect(2) = e-111
 Identities = 101/170 (59%), Positives = 116/170 (68%)
 Frame = -2

Query: 766 MEQTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLESAILAY 587
           +E TD           EDV TEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSL+SA+LAY
Sbjct: 253 LEYTDEEVERCYEEFYEDVQTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLDSAVLAY 312

Query: 586 RSLNGRYFASKQHVCTGC*QITCEYVGVTKWRVAICGEYMRSRLTTCSRGTACNFIHCFR 407
            S+NG Y+A K        Q+TCE+VGVT+W+VAICGEYM+SR  TCS GTACNFIHCFR
Sbjct: 313 HSINGLYYAGK--------QVTCEFVGVTRWKVAICGEYMKSRFKTCSHGTACNFIHCFR 364

Query: 406 NPSGDYXXXXXXXXXXXXXXXKMAYLFGASGENGYDKHVVPESWGKQEGS 257
           NP GDY                M  LFG + E+GYDK V  ES G++  +
Sbjct: 365 NPGGDYEWADWDKPPPRYWVKNMVALFGLTDESGYDKEVKQESMGRRRST 414


>ref|XP_003572619.1| PREDICTED: zinc finger CCCH domain-containing protein 16-like
            [Brachypodium distachyon]
          Length = 748

 Score =  228 bits (581), Expect(2) = e-108
 Identities = 106/146 (72%), Positives = 125/146 (85%)
 Frame = -1

Query: 1310 DELSEDEGWEYVEEGPAEIIWQGNEIIVKKKTVRVPKKNNDQQLVIEDKERPTSNPLPPQ 1131
            DE  ED+ WEYVE+GPAEIIWQGNEI VKKK V+VPKK+ D+ L I+++ERPTSNPLPPQ
Sbjct: 116  DESEEDDEWEYVEDGPAEIIWQGNEITVKKKKVKVPKKSKDKPL-IQEEERPTSNPLPPQ 174

Query: 1130 SEVFASYKNSAAVSSQGVFDSVAQETPNFGTEQDKANCPFHIKTGACRFGSRCSRVHYYP 951
            S   +S +   ++S+Q V + VAQETPNFGTEQDKA+CPF++KT ACRFG RCSRVH+YP
Sbjct: 175  SVAISSQRREPSLSAQEVLEKVAQETPNFGTEQDKAHCPFYLKTAACRFGVRCSRVHFYP 234

Query: 950  DKSCTLLIKNMYNGPGLAWEQDEGLE 873
            DKSCTLL+KNMYNGPGLA EQDEGLE
Sbjct: 235  DKSCTLLMKNMYNGPGLALEQDEGLE 260



 Score =  193 bits (491), Expect(2) = e-108
 Identities = 97/157 (61%), Positives = 106/157 (67%)
 Frame = -2

Query: 766 MEQTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLESAILAY 587
           +E TD           EDVHTEFLKFGE+VNFKVCRNGSFHLRGNVYVHYKSL+SA+LAY
Sbjct: 259 LEFTDEEVEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAY 318

Query: 586 RSLNGRYFASKQHVCTGC*QITCEYVGVTKWRVAICGEYMRSRLTTCSRGTACNFIHCFR 407
            S+NGRYFA K        QITCE+V VTKW+ AICGEYMRSR  TCS G ACNFIHCFR
Sbjct: 319 NSMNGRYFAGK--------QITCEFVAVTKWKAAICGEYMRSRFKTCSHGVACNFIHCFR 370

Query: 406 NPSGDYXXXXXXXXXXXXXXXKMAYLFGASGENGYDK 296
           NP GDY               KM  LFG S +  + K
Sbjct: 371 NPGGDYEWADWDNPPPKHWTRKMVALFGPSDDASFGK 407


>ref|NP_001241852.1| RGH3 splicing factor [Zea mays] gi|330470888|gb|AEC32092.1| RGH3
            splicing factor [Zea mays] gi|356609668|gb|AET25330.1|
            RGH3/ZmURP alpha protein isoform [Zea mays]
            gi|359392836|gb|AEV45825.1| rough endosperm 3 alpha
            isoform [Zea mays]
          Length = 755

 Score =  224 bits (571), Expect(2) = e-107
 Identities = 104/154 (67%), Positives = 129/154 (83%)
 Frame = -1

Query: 1334 DKLRQVENDELSEDEGWEYVEEGPAEIIWQGNEIIVKKKTVRVPKKNNDQQLVIEDKERP 1155
            +K +  + ++  ED  WEYVE+GPAEIIW+GNEIIVKKK V+VPK  + ++L I++++RP
Sbjct: 122  NKPKDGQGNQSEEDSEWEYVEDGPAEIIWKGNEIIVKKKKVKVPK-GSKEKLQIQEEDRP 180

Query: 1154 TSNPLPPQSEVFASYKNSAAVSSQGVFDSVAQETPNFGTEQDKANCPFHIKTGACRFGSR 975
            TSNPLPPQS   A+++   ++S+Q V D VAQETPNFGTEQDKA+CPFH+KTGACRFG R
Sbjct: 181  TSNPLPPQSVALAAHRREPSLSAQEVLDKVAQETPNFGTEQDKAHCPFHLKTGACRFGLR 240

Query: 974  CSRVHYYPDKSCTLLIKNMYNGPGLAWEQDEGLE 873
            CSRVH+YPDKS TLL+KNMYNGPGLA EQDEGLE
Sbjct: 241  CSRVHFYPDKSITLLMKNMYNGPGLALEQDEGLE 274



 Score =  192 bits (488), Expect(2) = e-107
 Identities = 100/176 (56%), Positives = 113/176 (64%)
 Frame = -2

Query: 766 MEQTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLESAILAY 587
           +E TD           EDVHTEFLKFGE+VNFKVCRNGSFHLRGNVYVHYKSL+SA+LAY
Sbjct: 273 LEFTDEEIEQSYEEFYEDVHTEFLKFGELVNFKVCRNGSFHLRGNVYVHYKSLDSALLAY 332

Query: 586 RSLNGRYFASKQHVCTGC*QITCEYVGVTKWRVAICGEYMRSRLTTCSRGTACNFIHCFR 407
            S+NGRYFA K        QITCE+V VT+W+ AICGEYMRSR  TCS G ACNFIHCFR
Sbjct: 333 SSMNGRYFAGK--------QITCEFVAVTRWKAAICGEYMRSRYKTCSHGVACNFIHCFR 384

Query: 406 NPSGDYXXXXXXXXXXXXXXXKMAYLFGASGENGYDKHVVPESWGKQEGSERETPK 239
           NP GDY               KM  LFG S +   +K      +    GS+R+  K
Sbjct: 385 NPGGDYEWADWDNHPPRYWIRKMVALFGPSVDEMNEKASHTPDFRSSVGSDRKKLK 440


>ref|XP_002527847.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223532771|gb|EEF34550.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 857

 Score =  223 bits (568), Expect(2) = e-107
 Identities = 103/151 (68%), Positives = 126/151 (83%), Gaps = 1/151 (0%)
 Frame = -1

Query: 1322 QVEND-ELSEDEGWEYVEEGPAEIIWQGNEIIVKKKTVRVPKKNNDQQLVIEDKERPTSN 1146
            QVE + E ++D+ WEYVEEGPAEIIWQGNEIIV+KK  ++PKK +  Q    + +RPTSN
Sbjct: 121  QVEKENEFNDDDDWEYVEEGPAEIIWQGNEIIVRKK--KIPKKKSADQQSRNEDDRPTSN 178

Query: 1145 PLPPQSEVFASYKNSAAVSSQGVFDSVAQETPNFGTEQDKANCPFHIKTGACRFGSRCSR 966
            PLPPQSE FA Y+ +   S++ + ++VAQ+ PNFGTEQDKA+CPFH+KTGACRFG RCSR
Sbjct: 179  PLPPQSEAFAEYQKAPMPSAERMLENVAQQIPNFGTEQDKAHCPFHLKTGACRFGQRCSR 238

Query: 965  VHYYPDKSCTLLIKNMYNGPGLAWEQDEGLE 873
            VH+YPDK+ TLL+KNMYNGPGLAWEQDEGLE
Sbjct: 239  VHFYPDKANTLLMKNMYNGPGLAWEQDEGLE 269



 Score =  192 bits (489), Expect(2) = e-107
 Identities = 97/175 (55%), Positives = 114/175 (65%)
 Frame = -2

Query: 766 MEQTDXXXXXXXXXXXEDVHTEFLKFGEIVNFKVCRNGSFHLRGNVYVHYKSLESAILAY 587
           +E TD           EDVHTEFLK+GEIVNFKVC+N SFHLRGNVYV YKSL+SA+LAY
Sbjct: 268 LEHTDEEVERSYEEFYEDVHTEFLKYGEIVNFKVCKNSSFHLRGNVYVQYKSLDSAVLAY 327

Query: 586 RSLNGRYFASKQHVCTGC*QITCEYVGVTKWRVAICGEYMRSRLTTCSRGTACNFIHCFR 407
            S+NGRYFA K        Q+ CE+V VT+W+VAICGEYM+SRL  CSRGTACNFIHCFR
Sbjct: 328 CSINGRYFAGK--------QVNCEFVNVTRWKVAICGEYMKSRLQMCSRGTACNFIHCFR 379

Query: 406 NPSGDYXXXXXXXXXXXXXXXKMAYLFGASGENGYDKHVVPESWGKQEGSERETP 242
           NP GDY               KM  LFG S E+  DK +  + + +   S +  P
Sbjct: 380 NPGGDYEWADWDKPPPRYWIEKMTALFGYSDESACDKQMEQDKFKQPRMSSKRIP 434


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