BLASTX nr result

ID: Papaver23_contig00017611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017611
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi...   244   2e-62
ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycin...   242   9e-62
gb|ACU24484.1| unknown [Glycine max]                                  241   2e-61
ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   240   5e-61
gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tu...   239   1e-60

>ref|XP_003602364.1| RNA-binding protein [Medicago truncatula] gi|355491412|gb|AES72615.1|
            RNA-binding protein [Medicago truncatula]
          Length = 380

 Score =  244 bits (624), Expect = 2e-62
 Identities = 135/272 (49%), Positives = 163/272 (59%), Gaps = 7/272 (2%)
 Frame = +2

Query: 227  ERMGRSNFISILVYTVEHIGAYKQWSMWSTTQIEDCSLGLLHGFGFKSIVFLSNRVYWI* 406
            +R+G    I  L++++   GA +QWS+WST   +DCSLGL       ++ FL + +    
Sbjct: 63   QRLGAQAVI-FLLWSI--FGANEQWSLWSTALFKDCSLGL-------TVQFLQSNM---- 108

Query: 407  EVDHIVYWKTSFVLEDCDLHVYFVHVQIKDSK*FLW*NNMRSSRSIYVGNLPLDIKESEI 586
                                                  + R SR+IYVGNLP DI+ESEI
Sbjct: 109  --------------------------------------SSRFSRTIYVGNLPADIRESEI 130

Query: 587  EDLFYKYGRIVDIELKIPPRPPGYCFVEFEDSRDAEDAIRGRDGYNFDGCHLRVELAHGG 766
            EDLFYKYGRI++IELK+PPRPP YCFVEF+++RDAEDAIRGRDGYNFDGC LRVELAHGG
Sbjct: 131  EDLFYKYGRIMEIELKVPPRPPCYCFVEFDNARDAEDAIRGRDGYNFDGCRLRVELAHGG 190

Query: 767  RGQ-------XXXXXXXXXXXXXXXXXXXXXXXXXXXTEYRVVVRGLPASASWQDLKDHM 925
            RG                                   +E+RV+VRGLP+SASWQDLKDHM
Sbjct: 191  RGPSSSDRRGYGGGGGGGGRGGGGDSAGGGRFGVSRHSEFRVIVRGLPSSASWQDLKDHM 250

Query: 926  RKAGDVCFAQVFRKGDGTMGLVDYTNYDDMKY 1021
            RKAGDVCFA+V R  +GT GLVDYTNYDDMKY
Sbjct: 251  RKAGDVCFAEVSRDSEGTFGLVDYTNYDDMKY 282


>ref|NP_001242110.1| uncharacterized protein LOC100786491 [Glycine max]
            gi|255636783|gb|ACU18725.1| unknown [Glycine max]
          Length = 267

 Score =  242 bits (618), Expect = 9e-62
 Identities = 115/165 (69%), Positives = 130/165 (78%)
 Frame = +2

Query: 527  RSSRSIYVGNLPLDIKESEIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDSRDAEDAIR 706
            R SR+IYVGNLP DI+ESEIEDLFYKYGRI+DIELK+PPRPP YCFVEF+++RDAEDAIR
Sbjct: 4    RFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIR 63

Query: 707  GRDGYNFDGCHLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXXTEYRVVVRGL 886
            GRDGYNFDGC LRVELAHGGRG                            +E+RV+VRGL
Sbjct: 64   GRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGL 123

Query: 887  PASASWQDLKDHMRKAGDVCFAQVFRKGDGTMGLVDYTNYDDMKY 1021
            P+SASWQDLKDHMRKAGDVCFA+V R  +GT+G+VDYTNYDDMKY
Sbjct: 124  PSSASWQDLKDHMRKAGDVCFAEVSRDSEGTLGIVDYTNYDDMKY 168


>gb|ACU24484.1| unknown [Glycine max]
          Length = 267

 Score =  241 bits (616), Expect = 2e-61
 Identities = 115/165 (69%), Positives = 129/165 (78%)
 Frame = +2

Query: 527  RSSRSIYVGNLPLDIKESEIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDSRDAEDAIR 706
            R SR+IYVGNLP DI+ESEIEDLFYKYGRI+DIELK+PPRPP YCFVEF+++RDAEDAIR
Sbjct: 4    RFSRTIYVGNLPSDIRESEIEDLFYKYGRIMDIELKVPPRPPCYCFVEFDNARDAEDAIR 63

Query: 707  GRDGYNFDGCHLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXXTEYRVVVRGL 886
            GRDGYNFDGC LRVELAHGGRG                            +E+RV+VRGL
Sbjct: 64   GRDGYNFDGCRLRVELAHGGRGPSSSDRRGYGGGGGNGGAGGGRFGISRHSEFRVIVRGL 123

Query: 887  PASASWQDLKDHMRKAGDVCFAQVFRKGDGTMGLVDYTNYDDMKY 1021
            P+SASWQDLKDHMRKAGDVCFA+V R  +GT G+VDYTNYDDMKY
Sbjct: 124  PSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGIVDYTNYDDMKY 168


>ref|XP_003634148.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
            vinifera] gi|359490739|ref|XP_003634149.1| PREDICTED:
            pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
            vinifera] gi|302143975|emb|CBI23080.3| unnamed protein
            product [Vitis vinifera]
          Length = 250

 Score =  240 bits (612), Expect = 5e-61
 Identities = 118/165 (71%), Positives = 129/165 (78%)
 Frame = +2

Query: 527  RSSRSIYVGNLPLDIKESEIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDSRDAEDAIR 706
            R SR+IYVGNLP DI+E EIEDLFYKYGRI+D+ELKIPPRPP YCFVEFE+SRDAEDAIR
Sbjct: 4    RFSRTIYVGNLPSDIREYEIEDLFYKYGRILDVELKIPPRPPCYCFVEFENSRDAEDAIR 63

Query: 707  GRDGYNFDGCHLRVELAHGGRGQXXXXXXXXXXXXXXXXXXXXXXXXXXXTEYRVVVRGL 886
            GRDGYNFDGC LRVELAHGGRGQ                           +EYRV+VRGL
Sbjct: 64   GRDGYNFDGCRLRVELAHGGRGQ----SSSSDRRGGHGSGGGGRFGVSRHSEYRVIVRGL 119

Query: 887  PASASWQDLKDHMRKAGDVCFAQVFRKGDGTMGLVDYTNYDDMKY 1021
            P+SASWQDLKDHMRKAGDVCFA+V R  DGT GLVDYTN++DMKY
Sbjct: 120  PSSASWQDLKDHMRKAGDVCFAEVSRDADGTFGLVDYTNHEDMKY 164


>gb|ABA46766.1| pre-mRNA splicing factor-like protein [Solanum tuberosum]
          Length = 269

 Score =  239 bits (609), Expect = 1e-60
 Identities = 117/166 (70%), Positives = 127/166 (76%), Gaps = 1/166 (0%)
 Frame = +2

Query: 527  RSSRSIYVGNLPLDIKESEIEDLFYKYGRIVDIELKIPPRPPGYCFVEFEDSRDAEDAIR 706
            R SRSIYVGNLP DIKE E+EDLFYKYGRI+DIELKIPPRPP YCFVEFE SRDAEDAIR
Sbjct: 4    RFSRSIYVGNLPADIKELEVEDLFYKYGRILDIELKIPPRPPCYCFVEFESSRDAEDAIR 63

Query: 707  GRDGYNFDGCHLRVELAHGGRG-QXXXXXXXXXXXXXXXXXXXXXXXXXXXTEYRVVVRG 883
            GRDGYNFDGC LRVELAHGGRG                             ++YRV++RG
Sbjct: 64   GRDGYNFDGCRLRVELAHGGRGPSSSSDRRGSYGSSGGGGGGGGRHGISRHSDYRVIIRG 123

Query: 884  LPASASWQDLKDHMRKAGDVCFAQVFRKGDGTMGLVDYTNYDDMKY 1021
            LP+SASWQDLKDHMRKAGDVCFA+V R  +GT GLVDYTNY+DMKY
Sbjct: 124  LPSSASWQDLKDHMRKAGDVCFAEVSRDSEGTFGLVDYTNYEDMKY 169


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