BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017454
         (739 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II su...   240   2e-61
ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II su...   239   4e-61
ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 ...   237   2e-60
ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycin...   232   7e-59
ref|NP_567490.1| RNA polymerases M/15 Kd subunit [Arabidopsis th...   230   2e-58

>ref|XP_002276956.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9 [Vitis
           vinifera] gi|147769002|emb|CAN66735.1| hypothetical
           protein VITISV_024186 [Vitis vinifera]
           gi|296083263|emb|CBI22899.3| unnamed protein product
           [Vitis vinifera]
          Length = 114

 Score =  240 bits (613), Expect = 2e-61
 Identities = 107/114 (93%), Positives = 112/114 (98%)
 Frame = -3

Query: 611 MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAAENNCVYRNEIHHSVGERTQILQ 432
           MSTMKFCRECNNILYPKED+EQKILLYACRNC+HQE AENNCVYRNEIHHSVGERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEVAENNCVYRNEIHHSVGERTQVLQ 60

Query: 431 DVAADPTLPRTKAVRCALCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 270
           DVAADPTLPRTK+VRCA CNHGEAVFFQATARGEEGMTLFFVCCNPNCG+RWRD
Sbjct: 61  DVAADPTLPRTKSVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGYRWRD 114


>ref|XP_004134242.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB9-like
           [Cucumis sativus] gi|449517969|ref|XP_004166016.1|
           PREDICTED: DNA-directed RNA polymerase II subunit
           RPB9-like [Cucumis sativus]
          Length = 114

 Score =  239 bits (610), Expect = 4e-61
 Identities = 105/114 (92%), Positives = 112/114 (98%)
 Frame = -3

Query: 611 MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAAENNCVYRNEIHHSVGERTQILQ 432
           MSTMKFCRECNNILYPKED+++KILLYACRNC+HQE A+NNCVYRNEIHH+VGERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDRDEKILLYACRNCDHQEVADNNCVYRNEIHHAVGERTQVLQ 60

Query: 431 DVAADPTLPRTKAVRCALCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 270
           DVAADPTLPRTKAVRCA CNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCAQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|XP_003594777.1| DNA-directed RNA polymerase II subunit RPB9 [Medicago truncatula]
           gi|87240462|gb|ABD32320.1| DNA-directed RNA polymerase,
           subunit C11/M/9 [Medicago truncatula]
           gi|217075262|gb|ACJ85991.1| unknown [Medicago
           truncatula] gi|355483825|gb|AES65028.1| DNA-directed RNA
           polymerase II subunit RPB9 [Medicago truncatula]
           gi|388497558|gb|AFK36845.1| unknown [Medicago
           truncatula]
          Length = 114

 Score =  237 bits (604), Expect = 2e-60
 Identities = 106/114 (92%), Positives = 110/114 (96%)
 Frame = -3

Query: 611 MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAAENNCVYRNEIHHSVGERTQILQ 432
           MSTMKFCRECNNILYPKED+EQKILLYACRNC+HQEAA+N CVYRNEIHHSV ERTQ+LQ
Sbjct: 1   MSTMKFCRECNNILYPKEDREQKILLYACRNCDHQEAADNFCVYRNEIHHSVAERTQVLQ 60

Query: 431 DVAADPTLPRTKAVRCALCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 270
           DVAADPTLPRTKAVRC  CNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKAVRCVQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|NP_001235803.1| uncharacterized protein LOC100305979 [Glycine max]
           gi|255627167|gb|ACU13928.1| unknown [Glycine max]
          Length = 114

 Score =  232 bits (591), Expect = 7e-59
 Identities = 101/114 (88%), Positives = 110/114 (96%)
 Frame = -3

Query: 611 MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAAENNCVYRNEIHHSVGERTQILQ 432
           MS MKFCRECNNILYPKED++QK+LL+ACRNC+HQE A+N CVYRNEIHHSVGERTQ+LQ
Sbjct: 1   MSAMKFCRECNNILYPKEDRDQKVLLFACRNCDHQEVADNFCVYRNEIHHSVGERTQVLQ 60

Query: 431 DVAADPTLPRTKAVRCALCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 270
           DVAADPTLPRTK+VRC+ CNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD
Sbjct: 61  DVAADPTLPRTKSVRCSQCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 114


>ref|NP_567490.1| RNA polymerases M/15 Kd subunit [Arabidopsis thaliana]
           gi|297800522|ref|XP_002868145.1| hypothetical protein
           ARALYDRAFT_493259 [Arabidopsis lyrata subsp. lyrata]
           gi|21537166|gb|AAM61507.1| RNA Polymerase II subunit
           14.5 kD, putative [Arabidopsis thaliana]
           gi|114050701|gb|ABI49500.1| At4g16265 [Arabidopsis
           thaliana] gi|297313981|gb|EFH44404.1| hypothetical
           protein ARALYDRAFT_493259 [Arabidopsis lyrata subsp.
           lyrata] gi|332658323|gb|AEE83723.1| RNA polymerases M/15
           Kd subunit [Arabidopsis thaliana]
          Length = 114

 Score =  230 bits (587), Expect = 2e-58
 Identities = 102/114 (89%), Positives = 108/114 (94%)
 Frame = -3

Query: 611 MSTMKFCRECNNILYPKEDKEQKILLYACRNCEHQEAAENNCVYRNEIHHSVGERTQILQ 432
           MSTMKFCRECNNILYPKEDKEQ ILLYACRNC+HQEAA+NNCVYRNE+HHSV E+TQIL 
Sbjct: 1   MSTMKFCRECNNILYPKEDKEQSILLYACRNCDHQEAADNNCVYRNEVHHSVSEQTQILS 60

Query: 431 DVAADPTLPRTKAVRCALCNHGEAVFFQATARGEEGMTLFFVCCNPNCGHRWRD 270
           DVA+DPTLPRTKAVRCA C HGEAVFFQATARGEEGMTLFFVCCNPNC HRWR+
Sbjct: 61  DVASDPTLPRTKAVRCAKCQHGEAVFFQATARGEEGMTLFFVCCNPNCSHRWRE 114