BLASTX nr result

ID: Papaver23_contig00017358 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017358
         (402 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003623530.1| Pentatricopeptide repeat-containing protein ...   160   1e-37
ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containi...   148   5e-34
ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|2...   142   2e-32
ref|XP_002533822.1| pentatricopeptide repeat-containing protein,...   135   3e-30
ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containi...   128   4e-28

>ref|XP_003623530.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355498545|gb|AES79748.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/141 (54%), Positives = 105/141 (74%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   MLLLGVKPNVYTYNVYINGLCKQNKIEEGFKIVEHMEELDCKPDVVTYNTLIGAVCKYGE 182
           +L+LG+ P+VYTYNVYINGLCKQN  +E  KIV  ME+L CKP+VVTYNTL+GA+C  G+
Sbjct: 316 ILVLGLVPDVYTYNVYINGLCKQNNFDEALKIVVSMEKLGCKPNVVTYNTLLGALCMSGD 375

Query: 183 VKRGKEVLRMMGMKGIGGNVHTYRM--------GELIEACELFEEMLVKDFVPRSSTLDT 338
           + + K V++ M +KG+  N+HTYR+        GE+ EAC L EEML K F PRSST D+
Sbjct: 376 LGKAKRVMKEMRLKGVELNLHTYRIMLDGLVGKGEIGEACVLLEEMLEKCFYPRSSTFDS 435

Query: 339 MIAGMCERGLVGEALQVLNKI 401
           ++  MC++GL+ +AL ++NKI
Sbjct: 436 IVHQMCQKGLISDALVLMNKI 456


>ref|XP_003533674.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Glycine max]
          Length = 499

 Score =  148 bits (373), Expect = 5e-34
 Identities = 72/141 (51%), Positives = 99/141 (70%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   MLLLGVKPNVYTYNVYINGLCKQNKIEEGFKIVEHMEELDCKPDVVTYNTLIGAVCKYGE 182
           ML++G+ P+ YTYNVYINGLCKQN + E  +IV  MEEL CKP+VVTYNTL+GA+   G+
Sbjct: 322 MLVIGLIPDAYTYNVYINGLCKQNNVAEALQIVASMEELGCKPNVVTYNTLLGALSVAGD 381

Query: 183 VKRGKEVLRMMGMKGIGGNVHTYRM--------GELIEACELFEEMLVKDFVPRSSTLDT 338
             + +E+++ MG KG+G N+HTYR+        GE+ E+C L EEML K   PRSST D 
Sbjct: 382 FVKARELMKEMGWKGVGLNLHTYRIVLDGLVGKGEIGESCLLLEEMLEKCLFPRSSTFDN 441

Query: 339 MIAGMCERGLVGEALQVLNKI 401
           +I  MC++ L  EA+++  K+
Sbjct: 442 IIFQMCQKDLFTEAMELTKKV 462


>ref|XP_002309173.1| predicted protein [Populus trichocarpa] gi|222855149|gb|EEE92696.1|
           predicted protein [Populus trichocarpa]
          Length = 506

 Score =  142 bits (359), Expect = 2e-32
 Identities = 68/141 (48%), Positives = 97/141 (68%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   MLLLGVKPNVYTYNVYINGLCKQNKIEEGFKIVEHMEELDCKPDVVTYNTLIGAVCKYGE 182
           +L+ G+ P+ YTYNVYINGLCKQN ++ G K+V  MEEL CKP+++TYN L+  +CK GE
Sbjct: 317 LLVFGLVPDAYTYNVYINGLCKQNNVQAGIKMVASMEELGCKPNLITYNMLVKQLCKVGE 376

Query: 183 VKRGKEVLRMMGMKGIGGNVHTYRM--------GELIEACELFEEMLVKDFVPRSSTLDT 338
           + +  E++R MG+KGIG N+ TYR+        G+++EAC LFEE L K    +S   D 
Sbjct: 377 LSKAGELVREMGLKGIGLNMQTYRIMIDGLASNGKIVEACGLFEEALDKGLCTQSLMFDE 436

Query: 339 MIAGMCERGLVGEALQVLNKI 401
           +I G+C R L  +AL++L K+
Sbjct: 437 IICGLCHRDLSCKALKLLEKM 457


>ref|XP_002533822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526239|gb|EEF28557.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 373

 Score =  135 bits (341), Expect = 3e-30
 Identities = 64/141 (45%), Positives = 95/141 (67%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   MLLLGVKPNVYTYNVYINGLCKQNKIEEGFKIVEHMEELDCKPDVVTYNTLIGAVCKYGE 182
           +L+ G+ P+VYTYNVYI GLCKQN +E G ++V  MEEL CKP+++TYN L+  +CK GE
Sbjct: 189 LLVFGLVPDVYTYNVYIYGLCKQNNVEAGIEMVTSMEELGCKPNLITYNILLEDLCKNGE 248

Query: 183 VKRGKEVLRMMGMKGIGGNVHTYRM--------GELIEACELFEEMLVKDFVPRSSTLDT 338
             R ++++R MG KGIG  + TY++        G++++AC L EE L K   PR    D 
Sbjct: 249 DSRARDLVRDMGSKGIGLGMQTYKVMIHGLTSGGKIVKACSLLEEALDKGLCPRGLRFDE 308

Query: 339 MIAGMCERGLVGEALQVLNKI 401
           +I G+C+ G + +AL++L K+
Sbjct: 309 VIYGLCQTGSICKALELLEKV 329


>ref|XP_002265961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g38420,
           mitochondrial-like [Vitis vinifera]
          Length = 505

 Score =  128 bits (322), Expect = 4e-28
 Identities = 67/141 (47%), Positives = 93/141 (65%), Gaps = 8/141 (5%)
 Frame = +3

Query: 3   MLLLGVKPNVYTYNVYINGLCKQNKIEEGFKIVEHMEELDCKPDVVTYNTLIGAVCKYGE 182
           ML+LGV P+++ YNVYIN LCKQN IEEG +++  M EL CKPD VTYN L+  + K  +
Sbjct: 317 MLVLGVVPDIHAYNVYINSLCKQNNIEEGVRMLASMRELGCKPDYVTYNMLLEGMSKVRD 376

Query: 183 VKRGKEVLRMMGMKGIGGNVHTYRM--------GELIEACELFEEMLVKDFVPRSSTLDT 338
           +   +E+ R M ++G+  N  TYR+        GE+ E+C L EEML K F    ST D 
Sbjct: 377 LGGMRELAREMELEGVQWNWETYRIMLDGLVGKGEIDESCSLLEEMLDKYFSCWCSTFDE 436

Query: 339 MIAGMCERGLVGEALQVLNKI 401
           +I  +C+RGLV +ALQ++NK+
Sbjct: 437 IICELCQRGLVCKALQLVNKM 457


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