BLASTX nr result

ID: Papaver23_contig00017198 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00017198
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315479.1| f-box family protein [Populus trichocarpa] g...    87   1e-15
ref|XP_002519349.1| conserved hypothetical protein [Ricinus comm...    80   2e-13
gb|AAD34677.1|AC006341_5 Contains two PF|01344 Kelch motif domai...    75   5e-12
ref|XP_002890155.1| kelch repeat-containing F-box family protein...    75   5e-12
ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thalian...    75   5e-12

>ref|XP_002315479.1| f-box family protein [Populus trichocarpa]
           gi|222864519|gb|EEF01650.1| f-box family protein
           [Populus trichocarpa]
          Length = 413

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   VGGKVLKWEELGAGRFDIVKLDVVRVCDPTVVPLKWRETRPMRG-ACGAVTGCA 159
           +GGKVLKWEE GAGRFDIV+LD+VR C+P   PLKW+ETRPM G ACG++ GCA
Sbjct: 329 LGGKVLKWEEAGAGRFDIVRLDLVRFCNPVARPLKWKETRPMCGPACGSILGCA 382


>ref|XP_002519349.1| conserved hypothetical protein [Ricinus communis]
           gi|223541664|gb|EEF43213.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 388

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 37/54 (68%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
 Frame = +1

Query: 1   VGGKVLKWEELGAGRFDIVKLDVVRVCDPTVVPLKWRETRPM-RGACGAVTGCA 159
           +GGKVLKWEE G GRFDIV+LD+VRVC+P V PL W+E RPM R A G++ GCA
Sbjct: 331 LGGKVLKWEEAGNGRFDIVRLDLVRVCNPIVRPLNWKEARPMCRPARGSILGCA 384


>gb|AAD34677.1|AC006341_5 Contains two PF|01344 Kelch motif domains [Arabidopsis thaliana]
          Length = 439

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   VGGKVLKWEELGAGRFDIVKLDVVRVCDPTVVPLKWRETRPM-RGACGAVTGC 156
           +GGKVLKWEE GAGRFDIV+L VVRVC+P   PL WRET+PM   A G++ GC
Sbjct: 378 IGGKVLKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETKPMCIPAGGSIIGC 430


>ref|XP_002890155.1| kelch repeat-containing F-box family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297335997|gb|EFH66414.1| kelch
           repeat-containing F-box family protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 404

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   VGGKVLKWEELGAGRFDIVKLDVVRVCDPTVVPLKWRETRPM-RGACGAVTGC 156
           +GGKVLKWEE GAGRFDIV+L VVRVC+P   PL WRET+PM   A G++ GC
Sbjct: 343 IGGKVLKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETKPMCIPAGGSIIGC 395


>ref|NP_173075.3| F-box/kelch-repeat protein [Arabidopsis thaliana]
           gi|122242689|sp|Q0WW40.1|FBK5_ARATH RecName:
           Full=F-box/kelch-repeat protein At1g16250
           gi|110741130|dbj|BAE98658.1| hypothetical protein
           [Arabidopsis thaliana] gi|119360151|gb|ABL66804.1|
           At1g16250 [Arabidopsis thaliana]
           gi|332191305|gb|AEE29426.1| F-box/kelch-repeat protein
           [Arabidopsis thaliana]
          Length = 383

 Score = 75.5 bits (184), Expect = 5e-12
 Identities = 36/53 (67%), Positives = 42/53 (79%), Gaps = 1/53 (1%)
 Frame = +1

Query: 1   VGGKVLKWEELGAGRFDIVKLDVVRVCDPTVVPLKWRETRPM-RGACGAVTGC 156
           +GGKVLKWEE GAGRFDIV+L VVRVC+P   PL WRET+PM   A G++ GC
Sbjct: 322 IGGKVLKWEESGAGRFDIVRLPVVRVCNPLDRPLNWRETKPMCIPAGGSIIGC 374


Top