BLASTX nr result

ID: Papaver23_contig00016978 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016978
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   265   6e-69
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   251   1e-64
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...   246   3e-63
ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glyc...   243   3e-62
ref|XP_002325403.1| predicted protein [Populus trichocarpa] gi|2...   243   3e-62

>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  265 bits (677), Expect = 6e-69
 Identities = 136/193 (70%), Positives = 154/193 (79%)
 Frame = +2

Query: 80  MQTPNLQNLEEQSVLGTLLVRNLPEAIPHETLSRLFSYYGASSVRPCSSGRLRNCAFVDF 259
           M  P  Q+ E +    TLL+R+LPEAIP +TLSRLFS YGASSVRPC+SGRLRNCAFVDF
Sbjct: 6   MLGPRTQSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPCTSGRLRNCAFVDF 65

Query: 260 KDETLACQAQRQLNKLRFLGKVLSVERANKPTLGNKNPQNETQFGKDSSISPGSLLKDVN 439
           K E LA QA RQLN LRFLGKVL VERANKPT  +K  ++E  FGKD +  P SL+KD  
Sbjct: 66  KSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQ-KSEALFGKDLT-KPVSLIKDFT 123

Query: 440 LSGNVTKGASLGSLPIGEPIAARLGVEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFY 619
           ++ ++ +G    SLP  EPIAARLG++YPFPPHLEYAYPPPDGNILTNIVNALIAVPRFY
Sbjct: 124 MARDLDEGLKSSSLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFY 183

Query: 620 TQVLHLMNKMNIP 658
            QVLHLMNKMNIP
Sbjct: 184 VQVLHLMNKMNIP 196


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score =  251 bits (640), Expect = 1e-64
 Identities = 131/193 (67%), Positives = 149/193 (77%)
 Frame = +2

Query: 80  MQTPNLQNLEEQSVLGTLLVRNLPEAIPHETLSRLFSYYGASSVRPCSSGRLRNCAFVDF 259
           M  P  Q+ E +    TLL+R+LPEAIP +TLSRLFS YGASSVRP +SGRLRNCAFVDF
Sbjct: 6   MLGPRTQSFEAEKSAATLLIRHLPEAIPQDTLSRLFSSYGASSVRPSTSGRLRNCAFVDF 65

Query: 260 KDETLACQAQRQLNKLRFLGKVLSVERANKPTLGNKNPQNETQFGKDSSISPGSLLKDVN 439
           K E LA QA RQLN LRFLGKVL VERANKPT  +K  ++E  FGKD +  P SL+KD  
Sbjct: 66  KSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDKQ-KSEALFGKDLT-KPASLIKDFT 123

Query: 440 LSGNVTKGASLGSLPIGEPIAARLGVEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFY 619
           ++ ++ +G    SLP  EPIAARLG++YPFPPHLEY    PDGNILTNIVNALIAVPRFY
Sbjct: 124 MARDLGEGLKSSSLPASEPIAARLGIDYPFPPHLEYVXSHPDGNILTNIVNALIAVPRFY 183

Query: 620 TQVLHLMNKMNIP 658
            QVLHLMNKMNIP
Sbjct: 184 VQVLHLMNKMNIP 196


>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
           gi|223535277|gb|EEF36954.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 450

 Score =  246 bits (628), Expect = 3e-63
 Identities = 128/185 (69%), Positives = 145/185 (78%), Gaps = 2/185 (1%)
 Frame = +2

Query: 110 EQSVLGTLLVRNLPEAIPHETLSRLFSYYGASSVRPCSSGRLRNCAFVDFKDETLACQAQ 289
           E + + TLL+R+LPEAIPHETLSRLFS+YGA+SVRPC+ GRL NCAFVDFK+E LA QAQ
Sbjct: 4   ESAAVSTLLIRHLPEAIPHETLSRLFSHYGATSVRPCAGGRLTNCAFVDFKNEALAYQAQ 63

Query: 290 RQLNKLRFLGKVLSVERA--NKPTLGNKNPQNETQFGKDSSISPGSLLKDVNLSGNVTKG 463
           RQLN LRFLGKVL+ E+A  NKP   N   Q+E Q  KD ++ P S+ KD   S  +   
Sbjct: 64  RQLNGLRFLGKVLAAEKANNNKPNENNVLTQSEAQIRKDHTL-PTSVDKDA--SAMIDTD 120

Query: 464 ASLGSLPIGEPIAARLGVEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 643
               S+P  EPIA RLGV+YPFPPHLEY YPPPDGNILTNIVNALIAVPRFYTQVLHLMN
Sbjct: 121 GRSKSVPASEPIAPRLGVDYPFPPHLEYTYPPPDGNILTNIVNALIAVPRFYTQVLHLMN 180

Query: 644 KMNIP 658
           KMNIP
Sbjct: 181 KMNIP 185


>ref|XP_003553326.1| PREDICTED: RNA-binding protein 40-like [Glycine max]
          Length = 452

 Score =  243 bits (619), Expect = 3e-62
 Identities = 125/183 (68%), Positives = 143/183 (78%)
 Frame = +2

Query: 110 EQSVLGTLLVRNLPEAIPHETLSRLFSYYGASSVRPCSSGRLRNCAFVDFKDETLACQAQ 289
           E  V  TLL+++LPEAIP  TLSR+ + +GASSVRPCS+GRLRNCAF DFK+E +A QAQ
Sbjct: 29  ESLVPATLLIKHLPEAIPDVTLSRILANFGASSVRPCSTGRLRNCAFADFKNEIVASQAQ 88

Query: 290 RQLNKLRFLGKVLSVERANKPTLGNKNPQNETQFGKDSSISPGSLLKDVNLSGNVTKGAS 469
           RQLN LRFLGKVLS ERA+ PT   +    + Q GKDS  S   +LK+ N++  +     
Sbjct: 89  RQLNGLRFLGKVLSAERASNPTENGEKSSGD-QLGKDSKTS---MLKNANVTKPIDGDTK 144

Query: 470 LGSLPIGEPIAARLGVEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKM 649
            G+LPI EPIA RLGV YPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKM
Sbjct: 145 SGALPIPEPIADRLGVNYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKM 204

Query: 650 NIP 658
           NIP
Sbjct: 205 NIP 207


>ref|XP_002325403.1| predicted protein [Populus trichocarpa] gi|222862278|gb|EEE99784.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  243 bits (619), Expect = 3e-62
 Identities = 126/183 (68%), Positives = 145/183 (79%)
 Frame = +2

Query: 110 EQSVLGTLLVRNLPEAIPHETLSRLFSYYGASSVRPCSSGRLRNCAFVDFKDETLACQAQ 289
           E  V  TLL+++LPEAIP +TLSRLFS+YGA SVRPC+SGRL+NCAFVDFK E+LA QA 
Sbjct: 31  EPQVTVTLLIKHLPEAIPFKTLSRLFSHYGAVSVRPCNSGRLKNCAFVDFKSESLAYQAH 90

Query: 290 RQLNKLRFLGKVLSVERANKPTLGNKNPQNETQFGKDSSISPGSLLKDVNLSGNVTKGAS 469
            QLN L FLGKVLSVERA+K         +E Q GK+S + P SL++D ++  +V  G+ 
Sbjct: 91  TQLNGLSFLGKVLSVERASK--------LSEAQQGKES-VPPTSLIEDASVPRDVGDGSK 141

Query: 470 LGSLPIGEPIAARLGVEYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKM 649
             S P  EPIA RLGV+YPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKM
Sbjct: 142 FRSFPASEPIAPRLGVDYPFPPHLEYAYPPPDGNILTNIVNALIAVPRFYTQVLHLMNKM 201

Query: 650 NIP 658
           NIP
Sbjct: 202 NIP 204


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