BLASTX nr result

ID: Papaver23_contig00016965 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016965
         (1386 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301588.1| f-box family protein [Populus trichocarpa] g...   112   3e-22
ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...   108   3e-21
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    99   2e-18
ref|XP_003612153.1| F-box family protein [Medicago truncatula] g...    88   5e-15
gb|AFK37781.1| unknown [Lotus japonicus]                               87   8e-15

>ref|XP_002301588.1| f-box family protein [Populus trichocarpa]
            gi|222843314|gb|EEE80861.1| f-box family protein [Populus
            trichocarpa]
          Length = 408

 Score =  112 bits (279), Expect = 3e-22
 Identities = 101/311 (32%), Positives = 152/311 (48%), Gaps = 30/311 (9%)
 Frame = +1

Query: 175  KRIKHPRVEMVEYDVLVIGSCSGLICLSVPNHGIGDPIYVCNPYTGEYANLPRLIIDGSH 354
            KRI+ P   M+  +  V+GSC+GL+CLS  +    D +Y+ NP+TG Y  LP+ +     
Sbjct: 108  KRIRAPFSSMMP-EFEVVGSCNGLLCLS--DSLFNDSLYIYNPFTGRYKELPKSLQ---- 160

Query: 355  NTIGGHCYPN--IVCGFGYLQRSNEYKVVRIYY-----PSYP-------GVGWVQIYTLG 492
                   YP+  +V GFG+  ++NEYKV+RI Y       YP        +  VQI TLG
Sbjct: 161  -------YPDQEVVFGFGFNPKTNEYKVIRIVYYRNGHGRYPRSRRIIYPLSQVQILTLG 213

Query: 493  SCSGWRSIGEIKYSLC--LSGVLSNEILYFM-----DARKQEIVALDLADEEFRPLSLPP 651
             C GWRS+G++ Y L    S  L N  L+++     +   + +V+ DL DE+FR +  P 
Sbjct: 214  -CPGWRSLGKVSYRLVRRASETLVNGRLHWVSRPCRNKPARRLVSFDLTDEQFREVPKPD 272

Query: 652  SIQDGDYSNANSYVKLIGEQLCV-VHEQYGNRVDIWSFKETEQKNIFTTGKDHNSWSW-- 822
                G  +  + ++ ++   L V V+  YG R++IW  KE   K  +   K++N  ++  
Sbjct: 273  C---GGLNRCDYHLAVLRGCLSVAVYCNYG-RLEIWVMKEYNVKESWV--KEYNIGAYMP 326

Query: 823  -----NLDYSIP-WDFPDKNGSCMPFALTKGKEILLWYNAWTLVSYAPESATFKTIVDDR 984
                 NL   +  W       +     + K  EILL Y    LVSY P+   FK I D +
Sbjct: 327  KGLKQNLVRPLKIWKNASNGRAVRALCVLKNGEILLEYKNRALVSYDPKKGKFKDI-DLQ 385

Query: 985  MTYDNFQAIPH 1017
             T   FQ + H
Sbjct: 386  GTPKWFQTVVH 396


>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score =  108 bits (270), Expect = 3e-21
 Identities = 99/296 (33%), Positives = 144/296 (48%), Gaps = 30/296 (10%)
 Frame = +1

Query: 175 KRIKHPRVEMVEYDVLVIGSCSGLICLSVPNHGIGDPIYVCNPYTGEYANLPRLIIDGSH 354
           KRI  P   M+  +  V+GSC+GL+CLS   +   D +Y+ NP+TG Y  LP+ +     
Sbjct: 109 KRIPAPFSSMMP-EFEVVGSCNGLLCLSDSLYN--DSLYIYNPFTGCYKELPKSLQ---- 161

Query: 355 NTIGGHCYPN--IVCGFGYLQRSNEYKVVRIYY-----PSYP-------GVGWVQIYTLG 492
                  YP+  +V GFG+  ++ EYKV+RI Y       YP        +  VQI TLG
Sbjct: 162 -------YPDQEVVSGFGFNPKTKEYKVIRIVYYRNGHGGYPRSRRIIYPLSEVQILTLG 214

Query: 493 SCSGWRSIGEIKYSLC--LSGVLSNEILYFM-----DARKQEIVALDLADEEFRPLSLPP 651
            C  WRS+G++ Y L    SG L N  L+++     +   + +V+ DL DE+FR +S P 
Sbjct: 215 -CPEWRSLGKVSYRLVRRASGALVNGRLHWISRPCRNKPARRLVSFDLTDEQFREVSKPD 273

Query: 652 SIQDGDYSNANSY-VKLIGEQLCVVHEQYGNRVDIWSFKETEQKNIFTTGKDHNSWSW-- 822
               G  +  N + V L G     V+  YG R++IW  KE   K  +   K++N  ++  
Sbjct: 274 C---GGLNRCNYHLVVLRGCLSAAVYCNYG-RLEIWVMKEYNVKESWV--KEYNIGAYMP 327

Query: 823 -----NLDYSIPWDFPDKNGSCM-PFALTKGKEILLWYNAWTLVSYAPESATFKTI 972
                N D  +       NG  +    + K  EILL Y    LVSY P++  FK I
Sbjct: 328 KGLKQNQDRQLKIWKNSSNGRVVGALCVLKNGEILLEYKNRVLVSYDPKNGKFKDI 383


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 99.4 bits (246), Expect = 2e-18
 Identities = 87/277 (31%), Positives = 128/277 (46%), Gaps = 27/277 (9%)
 Frame = +1

Query: 223 VIGSCSGLICLSVPNHGIGDPIYVCNPYTGEYANLPRLIIDGSHNTIGGHCYPN--IVCG 396
           V+GSC+GL+CL+  +    D +YV NP+T ++  LP+ +            YP+  +V G
Sbjct: 124 VVGSCNGLLCLA--DSLFKDAVYVHNPFTRDFKQLPKSLQ-----------YPDQEVVFG 170

Query: 397 FGYLQRSNEYKVVRIYY--PSYPGVGW----------VQIYTLGSCSGWRSIGEIKYSLC 540
           FGY   +  YKVV++ Y    Y G             VQ+ TLGS + WRS+G++ Y L 
Sbjct: 171 FGYHPMTEVYKVVKVVYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQLD 229

Query: 541 L--SGVLSNEILYFMDARKQE----IVALDLADEEFRPLSLPPSIQDGDYSNANSYVKLI 702
              S  L N  L+++   ++     IV+ DLADE+FR +  P     G  S  N ++ ++
Sbjct: 230 RWPSEALVNGRLHWVTRPRRYVTRFIVSFDLADEQFREIPKPDC---GGLSRCNYHLLVL 286

Query: 703 GEQLCVVHEQYGNRVDIWSFKETEQKNI----FTTGKDHNSWSWNLDYSIP---WDFPDK 861
           G  L     +   ++++W  KE + K      F  G  H       D + P   W    K
Sbjct: 287 GGCLSAAVHRSNGKLEVWVMKEYDVKESWIKEFNIGA-HLPKGLKQDVNRPHRIWRNAPK 345

Query: 862 NGSCMPFALTKGKEILLWYNAWTLVSYAPESATFKTI 972
                   L K  EILL Y    LVSY PE   FK +
Sbjct: 346 GRGVRLLCLLKNGEILLEYKGRVLVSYNPERGKFKDL 382


>ref|XP_003612153.1| F-box family protein [Medicago truncatula]
            gi|355513488|gb|AES95111.1| F-box family protein
            [Medicago truncatula]
          Length = 507

 Score = 88.2 bits (217), Expect = 5e-15
 Identities = 82/300 (27%), Positives = 131/300 (43%), Gaps = 27/300 (9%)
 Frame = +1

Query: 223  VIGSCSGLICLSVPNHGIGDPIYVCNPYTGEYANLPRLIIDGSHNTIGGHCYPNIVCGFG 402
            ++ SC+GL+CLS P+   G+P+ +CNP TGE+  LP  I D +     G        GFG
Sbjct: 181  IVNSCNGLLCLSDPS--FGNPLVICNPVTGEFIRLPESIADQNRVRRLGQ------AGFG 232

Query: 403  YLQRSNEYKVVRIYYPSYPGVG-W------VQIYTLGSCSGWR--------SIGEIKYSL 537
            +  ++NEYKV+ ++         W      ++I TLG+ S WR        S   +KY  
Sbjct: 233  FQPKTNEYKVINMWVRHVKRANVWEFERLTLEINTLGTPS-WRNVEVDPQISFSSLKYPT 291

Query: 538  CLSGVLSNEILYFMDARKQEIVALDLADEEFRPLSLPPSI----QDGDYSNANSYVKLIG 705
            C++G L    L F D  ++ I+      E  +    PP +     +G  SN +  +  + 
Sbjct: 292  CVNGAL--HWLRF-DGLQRSILIFCFESETLKSFPSPPQMFGNHNNGFLSNRHISMGELK 348

Query: 706  EQLCVVHEQYGNRVDIWSFKETEQKNIFTTGKDHNSWSWNLDYSIPWDF-------PDKN 864
              L +    + + V +W   E      +  G+     SW   Y+I   F       P + 
Sbjct: 349  GFLYICDSTFLSDVSMWVMNE------YGIGE-----SWTKIYNIDTSFNPSESRVPRRY 397

Query: 865  GSCMPFA-LTKGKEILLWYNAWTLVSYAPESATFKTIVDDRMTYDNFQAIPHRHSRVSLK 1041
            G   P     +G  ILL+++    + Y PE   F+       + + F+ IPH  S +SLK
Sbjct: 398  GLSWPIKHFEEGAAILLYHSCNCFIYYEPEKYGFEVFRIYGSSSNFFEVIPHIPSLISLK 457


>gb|AFK37781.1| unknown [Lotus japonicus]
          Length = 489

 Score = 87.4 bits (215), Expect = 8e-15
 Identities = 84/283 (29%), Positives = 119/283 (42%), Gaps = 10/283 (3%)
 Frame = +1

Query: 223  VIGSCSGLICLSVPNHGIGDPIYVCNPYTGEYANLPRLIIDGSHNTIGGHCYPNIVCGFG 402
            V+ SC+GLICL        D   VCNP TGE+  LP+    G  N         I  GFG
Sbjct: 177  VVNSCNGLICLCDRER---DYFVVCNPITGEFIRLPQTSRIGKTNKFS---IQEIYAGFG 230

Query: 403  YLQRSNEYKVVRIY--YPSYPGVGWVQIYTLGSCSGWRSIG-------EIKYSLCLSGVL 555
            +  ++NEYKVVRI      Y G+   +++TLG+ S WR++         +++  C+SG L
Sbjct: 231  FQPKNNEYKVVRILRGLQFYHGIMAAEVHTLGT-STWRNVEVNSMYFYHLRFPTCVSGAL 289

Query: 556  SNEILYFMDARKQEIVALDLADEEFRPLSLPPSIQDGDYSNANSYVKLIGEQLCVVHEQY 735
                 Y        I+  D   E FR    PP +     + + +  +L G          
Sbjct: 290  HWIGSYH---GTLSILCFDFESERFRSFPTPPCLYQ-SCTESITMGELRGSLYICDSFSK 345

Query: 736  GNRVDIWSFKETEQKNIFTTGKDHNSWSWNLDYSIPWDFPDKNGSCMPFALTKGKEILLW 915
            G    +W  KE   K  +T       +S++   S  W F    G   P    K    +L 
Sbjct: 346  GTPFVMWIMKEYGFKESWT-----KIFSFDTMSSYRWPF---GGLYWPVKHFKNGSAILM 397

Query: 916  YNAWT-LVSYAPESATFKTIVDDRMTYDNFQAIPHRHSRVSLK 1041
            Y+++   + Y P    FK I   R T   F  IPH  S +SLK
Sbjct: 398  YHSYNFFIYYEPGKDGFK-IFKVRGTQSRFDVIPHIPSFISLK 439


Top