BLASTX nr result

ID: Papaver23_contig00016961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016961
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus ...   243   1e-62
ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|2...   232   4e-59
ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like ...   224   8e-57
ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thalia...   222   4e-56
ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata sub...   218   6e-55

>ref|XP_002524579.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223536132|gb|EEF37787.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  243 bits (621), Expect = 1e-62
 Identities = 114/190 (60%), Positives = 141/190 (74%)
 Frame = -1

Query: 572 SHCRSITGSGFNGCSETLIHVEADSCKLEPDGISGLVSGGGLEYLNLSDLSWCIHGDGLA 393
           S CR I+G GF GCS TL +++A+SC L+P G+ G+VSGGGLEYLN+S +SW I GDGLA
Sbjct: 199 SCCREISGVGFTGCSPTLAYIDAESCNLDPKGVMGIVSGGGLEYLNVSGISWSIKGDGLA 258

Query: 392 RIGQGSAVNLRVLNLRMCRNATNEAIMMISKGCPVLQEWSLAFCHDITITGWVAIGWNCN 213
            IG G A  L++LNLRMCR   +E+   I+KGCP+LQEW+LA CH + I+GW +IG+ CN
Sbjct: 259 AIGSGFAARLKILNLRMCRTVGDESATAIAKGCPLLQEWNLALCHGVQISGWESIGFGCN 318

Query: 212 NLEVLHVNRCRNFCDRGLQSLRDGCKRLSKLHMNHCVRVTKLAIESFKCRRGNVGISVEE 33
            LE LHVNRCRN CDRGLQ+LR+GCK LS L++N   RV+  AIE FK  RGNV I  EE
Sbjct: 319 RLEKLHVNRCRNLCDRGLQALREGCKMLSVLYLNKSCRVSSNAIELFKLYRGNVEIREEE 378

Query: 32  VSYIFPSFNF 3
           V  I P+  F
Sbjct: 379 VMCIGPARTF 388


>ref|XP_002323784.1| predicted protein [Populus trichocarpa] gi|222866786|gb|EEF03917.1|
           predicted protein [Populus trichocarpa]
          Length = 374

 Score =  232 bits (591), Expect = 4e-59
 Identities = 107/187 (57%), Positives = 138/187 (73%)
 Frame = -1

Query: 572 SHCRSITGSGFNGCSETLIHVEADSCKLEPDGISGLVSGGGLEYLNLSDLSWCIHGDGLA 393
           SHC  + G+GF GCS TL H++ADSC L+P+GI G+VSGGGLEYLN+S ++W   GD LA
Sbjct: 187 SHCSGVNGTGFKGCSPTLTHIDADSCNLDPEGIMGIVSGGGLEYLNVSRVNWWRSGDTLA 246

Query: 392 RIGQGSAVNLRVLNLRMCRNATNEAIMMISKGCPVLQEWSLAFCHDITITGWVAIGWNCN 213
            IG G A  L++LNL +CR   +E+I  I++GCP+LQEW++A CH + I GW +IG NCN
Sbjct: 247 VIGAGFATRLKILNLWLCRTVGDESIAAIARGCPLLQEWNVALCHGVRIAGWQSIGINCN 306

Query: 212 NLEVLHVNRCRNFCDRGLQSLRDGCKRLSKLHMNHCVRVTKLAIESFKCRRGNVGISVEE 33
            LE LHVNRCRN CD GLQ+LR+GCKRL  L++    +++  AIE FK  RGNV IS EE
Sbjct: 307 KLEKLHVNRCRNLCDLGLQALREGCKRLLVLYIGRPWKLSATAIELFKLCRGNVEISKEE 366

Query: 32  VSYIFPS 12
           + +I PS
Sbjct: 367 IMHIGPS 373


>ref|XP_003528813.1| PREDICTED: F-box/LRR-repeat protein 12-like [Glycine max]
          Length = 388

 Score =  224 bits (571), Expect = 8e-57
 Identities = 102/190 (53%), Positives = 140/190 (73%)
 Frame = -1

Query: 572 SHCRSITGSGFNGCSETLIHVEADSCKLEPDGISGLVSGGGLEYLNLSDLSWCIHGDGLA 393
           SHC  ++G GF GCS+TL +VEA+SCKL+ +G+ G+VSGGG+EYL++S LSW + GD L 
Sbjct: 200 SHCEGLSGVGFEGCSKTLAYVEAESCKLKQEGVMGIVSGGGIEYLDVSCLSWSVLGDPLP 259

Query: 392 RIGQGSAVNLRVLNLRMCRNATNEAIMMISKGCPVLQEWSLAFCHDITITGWVAIGWNCN 213
            IG  S   L++LN R+CR  ++ +I+ I+KGCP+L+EW+LA CH++   GW  +G  C 
Sbjct: 260 GIGFASC--LKILNFRLCRTVSDTSIVAIAKGCPLLEEWNLALCHEVREPGWRTVGLYCR 317

Query: 212 NLEVLHVNRCRNFCDRGLQSLRDGCKRLSKLHMNHCVRVTKLAIESFKCRRGNVGISVEE 33
           NL+ LHVNRCRN CD GLQ+LR+GCK LS L++N CVR+T +A+E FKC+R NV I   E
Sbjct: 318 NLKRLHVNRCRNLCDNGLQALREGCKNLSILYLNGCVRLTSVALELFKCQRANVCIKDIE 377

Query: 32  VSYIFPSFNF 3
           +  I P + F
Sbjct: 378 IMCIKPYWEF 387



 Score = 62.4 bits (150), Expect = 5e-08
 Identities = 37/125 (29%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
 Frame = -1

Query: 449 LEYLNLSDLSWCIHGDGLARI-GQGSAVNLRVLNLRMCRNATNEAIMMISKGCPVLQEWS 273
           L+ L+LS+ S  +   GL R+   GS  NL+ LNL  C   T+  + +++ GCP L   S
Sbjct: 90  LKSLSLSNCSE-LSDSGLTRLLSYGS--NLQKLNLDCCLKVTDYGLSLVASGCPSLMSIS 146

Query: 272 LAFCHDITITGWVAIGWNCNNLEVLHVNRCRNFCDRGLQSLRDGCKRLSKLHMNHCVRVT 93
           L  C  IT  G   +   C +++ ++++ C    D GL+++   C++L  ++++HC  ++
Sbjct: 147 LYRCPGITDKGLDTLASACLSMKYVNLSYCSQISDNGLKAITHWCRQLQAINISHCEGLS 206

Query: 92  KLAIE 78
            +  E
Sbjct: 207 GVGFE 211


>ref|NP_566312.1| F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
           gi|30680350|ref|NP_850534.1| F-box/LRR-repeat protein 12
           [Arabidopsis thaliana]
           gi|75207381|sp|Q9SRR1.1|FBL12_ARATH RecName:
           Full=F-box/LRR-repeat protein 12
           gi|6041850|gb|AAF02159.1|AC009853_19 unknown protein
           [Arabidopsis thaliana] gi|26452863|dbj|BAC43510.1|
           unknown protein [Arabidopsis thaliana]
           gi|30793809|gb|AAP40357.1| putative F-box protein
           family, AtFBL12 [Arabidopsis thaliana]
           gi|332641038|gb|AEE74559.1| F-box/LRR-repeat protein 12
           [Arabidopsis thaliana] gi|332641039|gb|AEE74560.1|
           F-box/LRR-repeat protein 12 [Arabidopsis thaliana]
          Length = 395

 Score =  222 bits (565), Expect = 4e-56
 Identities = 104/188 (55%), Positives = 138/188 (73%)
 Frame = -1

Query: 572 SHCRSITGSGFNGCSETLIHVEADSCKLEPDGISGLVSGGGLEYLNLSDLSWCIHGDGLA 393
           S+C+SITG GF+GCS TL +V+ADSC+LEP GI+G++SGGG+E+LN+S +S  I  DGL 
Sbjct: 202 SNCKSITGVGFSGCSPTLGYVDADSCQLEPKGITGIISGGGIEFLNISGVSCYIRKDGLV 261

Query: 392 RIGQGSAVNLRVLNLRMCRNATNEAIMMISKGCPVLQEWSLAFCHDITITGWVAIGWNCN 213
            IG G A  LR+LNLRMCR   +E+I  I+KGCP+LQEW+LA CH++ I+GW A+G  C 
Sbjct: 262 PIGSGIASKLRILNLRMCRTVGDESIEAIAKGCPLLQEWNLALCHEVKISGWEAVGKWCR 321

Query: 212 NLEVLHVNRCRNFCDRGLQSLRDGCKRLSKLHMNHCVRVTKLAIESFKCRRGNVGISVEE 33
           NL+ LHVNRCRN CD+GL +LR GC  L  L+MN   R+T  AIE F+  R ++ +  EE
Sbjct: 322 NLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAIEMFRLHRADITLRTEE 381

Query: 32  VSYIFPSF 9
           +  I P +
Sbjct: 382 MMVIGPDW 389


>ref|XP_002882535.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297328375|gb|EFH58794.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 394

 Score =  218 bits (555), Expect = 6e-55
 Identities = 102/188 (54%), Positives = 136/188 (72%)
 Frame = -1

Query: 572 SHCRSITGSGFNGCSETLIHVEADSCKLEPDGISGLVSGGGLEYLNLSDLSWCIHGDGLA 393
           S+C+SITG GFNGCS TL +V+A+SC+LEP GI G++SGGG+E+LN+S +S  I  DGL 
Sbjct: 201 SNCKSITGVGFNGCSPTLGYVDAESCQLEPKGIMGIISGGGIEFLNISGVSCYIRKDGLV 260

Query: 392 RIGQGSAVNLRVLNLRMCRNATNEAIMMISKGCPVLQEWSLAFCHDITITGWVAIGWNCN 213
            IG G A  LR+LNLRMCR   + +I  I+KGCP+LQEW+LA CH++ ++GW A+G  C 
Sbjct: 261 PIGSGIASKLRMLNLRMCRTVGDASIEAIAKGCPLLQEWNLALCHEVKVSGWKAVGKWCR 320

Query: 212 NLEVLHVNRCRNFCDRGLQSLRDGCKRLSKLHMNHCVRVTKLAIESFKCRRGNVGISVEE 33
           NL+ LHVNRCRN CD+GL +LR GC  L  L+MN   R+T  AIE F+  R ++ +  EE
Sbjct: 321 NLKKLHVNRCRNLCDQGLLALRCGCMNLQILYMNGNARLTPTAIEMFRLHRADITLRTEE 380

Query: 32  VSYIFPSF 9
           +  I P +
Sbjct: 381 MMVIGPDW 388


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