BLASTX nr result

ID: Papaver23_contig00016868 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016868
         (1494 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320506.1| f-box family protein [Populus trichocarpa] g...    89   3e-15
ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vi...    82   4e-13
gb|EEC69308.1| hypothetical protein OsI_38388 [Oryza sativa Indi...    82   5e-13
ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-12
ref|XP_002534512.1| conserved hypothetical protein [Ricinus comm...    77   9e-12

>ref|XP_002320506.1| f-box family protein [Populus trichocarpa]
           gi|222861279|gb|EEE98821.1| f-box family protein
           [Populus trichocarpa]
          Length = 422

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 79/268 (29%), Positives = 126/268 (47%), Gaps = 38/268 (14%)
 Frame = +3

Query: 96  MDFLPDELTTEILNRLPTTESVLESKSVCIGWRTVLAEKR-IGLLLGFTPRMGEENITRL 272
           M+ LP E+  +IL+RLP T S+++ K VC  WR ++ + + + L L  + +  +     L
Sbjct: 25  MELLPREIAHDILSRLPIT-SLVQFKCVCRAWRALVQDPQLVDLYLSCSTQDTDHPCLIL 83

Query: 273 --------------FYREQIDEEDLNRMLQENNHDPDDGTYKMTSHPIVGSCNGLVCFYV 410
                         F   + ++E + R+       P   +  M    +VGSCNGL+C   
Sbjct: 84  HCDFPIRNNLYFVDFAAHEEEKEKVKRI-------PAPFSSMMPEFEVVGSCNGLLCLSD 136

Query: 411 SHHHIKDHVYIMNPTTGEHLHLPRIAYPIPGPVTMWYP-RNIIGGFGYCQSTGEYKVVRI 587
           S ++  D +YI NP TG +  LP+         ++ YP + ++ GFG+   T EYKV+RI
Sbjct: 137 SLYN--DSLYIYNPFTGCYKELPK---------SLQYPDQEVVSGFGFNPKTKEYKVIRI 185

Query: 588 HLDGN-----------------VEVHTLGDRRGWRNVGVIPYTF--QKSGVYAHGCIFWI 710
               N                 V++ TLG    WR++G + Y    + SG   +G + WI
Sbjct: 186 VYYRNGHGGYPRSRRIIYPLSEVQILTLGCPE-WRSLGKVSYRLVRRASGALVNGRLHWI 244

Query: 711 NQSERN---IHIVSFNLDMETFRPHSPP 785
           ++  RN     +VSF+L  E FR  S P
Sbjct: 245 SRPCRNKPARRLVSFDLTDEQFREVSKP 272


>ref|XP_002279122.1| PREDICTED: F-box protein At3g07870 [Vitis vinifera]
           gi|147785390|emb|CAN68678.1| hypothetical protein
           VITISV_041941 [Vitis vinifera]
          Length = 409

 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 79/267 (29%), Positives = 123/267 (46%), Gaps = 37/267 (13%)
 Frame = +3

Query: 96  MDFLPDELTTEILNRLPTTESVLESKSVCIGWR-----TVLAEKRIGLLLGFTPRMGEEN 260
           M+ LP ++  +IL+RLP T S+++ + VC GWR     ++LA K +     + P +    
Sbjct: 27  MERLPRDIILDILSRLPVT-SLVQFRFVCRGWRLMAQDSLLASKHLCRTAQYNPCL---- 81

Query: 261 ITRLFY--REQIDEEDLNRMLQENNHDPDDGTYKMT--------SHPIVGSCNGLVCFYV 410
           I    Y  R QI   D++   ++      D   K+T           +VGSCNGL+C  +
Sbjct: 82  ILHCDYPIRNQISFVDISAESRDK-----DMVRKLTIPFWASMPEFEVVGSCNGLLC--L 134

Query: 411 SHHHIKDHVYIMNPTTGEHLHLPRIAYPIPGPVTMWYP-RNIIGGFGYCQSTGEYKVVRI 587
           +    KD VY+ NP T +   LP+         ++ YP + ++ GFGY   T  YKVV++
Sbjct: 135 ADSLFKDAVYVHNPFTRDFKQLPK---------SLQYPDQEVVFGFGYHPMTEVYKVVKV 185

Query: 588 HLDGN-----------------VEVHTLGDRRGWRNVGVIPYTFQK--SGVYAHGCIFWI 710
               N                 V+V TLG    WR++G + Y   +  S    +G + W+
Sbjct: 186 VYYRNGYGGFSRFRRITCSQSEVQVLTLGSPT-WRSLGKVSYQLDRWPSEALVNGRLHWV 244

Query: 711 NQSERNI--HIVSFNLDMETFRPHSPP 785
            +  R +   IVSF+L  E FR    P
Sbjct: 245 TRPRRYVTRFIVSFDLADEQFREIPKP 271


>gb|EEC69308.1| hypothetical protein OsI_38388 [Oryza sativa Indica Group]
          Length = 352

 Score = 81.6 bits (200), Expect = 5e-13
 Identities = 74/274 (27%), Positives = 113/274 (41%), Gaps = 46/274 (16%)
 Frame = +3

Query: 105 LPDELTTEILNRLPTTESVLESKSVCIGWRTVLAE------KRIGLLLGFTPRMGEENIT 266
           +P ++  EIL RLP        + VC  WR V+ E      +R    L F      E  +
Sbjct: 10  VPTDVFWEILRRLPQISGRRRLRLVCRRWRDVVDEVEPEVQRRRAKPLAFFKNGCYEPPS 69

Query: 267 RLFYREQIDEEDLNRMLQENNHDPDDGT-----YKMTSHPIVGSCNGLVCFYVSHHHIKD 431
             F  +   + D+  + +E   + DDG       +     +VGSCNGL+C ++   +   
Sbjct: 70  AFFLHDLAGDCDVTSLFREEEQEEDDGGDRDFFSRYNDDDMVGSCNGLICLWLDRSYSGG 129

Query: 432 -HVYIMNPTTGEHLHLPRIAYPIPGPVTMWYPRNIIG--GFGYCQSTGEYKVVRIHLDGN 602
             V+++NP TGE LH+P    P+    T  + R   G   FGY  +TG+YK+V    +G 
Sbjct: 130 CGVFVLNPVTGETLHIP--PPPLETMATSSHRRRREGPLSFGYHPTTGKYKIVHFPSNGR 187

Query: 603 ----------------------------VEVHTLGDRRG--WRNVGVIPYTFQKSG--VY 686
                                       V V TLGD     WR VG  P++   +   V 
Sbjct: 188 RVDDVTLGGTTSGAAAAASSFPSRHGGMVNVLTLGDGAASTWRAVGTPPWSLCVAWGVVS 247

Query: 687 AHGCIFWINQSERNIHIVSFNLDMETFRPHSPPP 788
             G  +W+ +      I+SF+L+ E     +P P
Sbjct: 248 VDGAAYWVAEGR---EIMSFDLEHERVAAVAPLP 278


>ref|XP_002326594.1| predicted protein [Populus trichocarpa] gi|222833916|gb|EEE72393.1|
            predicted protein [Populus trichocarpa]
          Length = 477

 Score = 79.7 bits (195), Expect = 2e-12
 Identities = 85/339 (25%), Positives = 138/339 (40%), Gaps = 19/339 (5%)
 Frame = +3

Query: 105  LPDELTTEILNRLPTTESVLESKSVCIGWRTVLAE---------KRIGLLLGFTPRMGEE 257
            LP +   +IL+RLP  +++     VC  W+ ++           +    L+  + R G  
Sbjct: 35   LPIQNLVDILSRLPF-KTIFSCMCVCKKWKDLILAPDFAKLHHTRAPASLILRSHRHGRR 93

Query: 258  NITRLFYREQIDEEDLNRMLQENNHDPDDGTYKMTSHPIVGSCNGLVCFYVSHHHIKDHV 437
               R      ++  D+          PD G +   +  IV +CNGL+C  + H H  + +
Sbjct: 94   RRPRSLCLLDLEASDICSPDAAVKLSPDFG-FPTGNFEIVNTCNGLIC--IRHFHSPNDI 150

Query: 438  YIMNPTTGEHLHLPRIAYPIPGPVTMWYPRNIIGGFGYCQSTGEYKVVRIHLDGN---VE 608
             I+NP  G+++ LP         V  W        FG+   T EYKV++     +    E
Sbjct: 151  SILNPLVGDYITLPLTKKKHKSYVFSW--------FGHSPKTDEYKVIQFVQQPSKLEAE 202

Query: 609  VHTLGDRRGWRNV--GVI--PYTFQKSGVYAHGCIFWI-NQSERNIHIVSFNLDMETFRP 773
            +HTLG +  W ++  G +  P   +    +  GC+ WI N   ++  I       E F+P
Sbjct: 203  IHTLG-KGTWTSIHGGALSPPIDMRCHNAFVGGCLHWIVNDPSKSEFIYCLEFGRELFQP 261

Query: 774  HSPPPHQIPGSESPVDYMPSLGMVLFGVQLLFYYKHEEVEYRIDFWSPTSDMNNHVWGPG 953
             + PPH  P  +     M  LG VL G    F Y   +     D W          +G  
Sbjct: 262  VAAPPHLGPNDKDRTGDM-MLG-VLGGCLYFFDYPLGD---SFDIWVMKQ------YGVQ 310

Query: 954  GEWHWKPKNSIILDGRNELL--WPTYSPIALGKTGDILL 1064
              W    K  I+ +   +++  W  Y PI+L   G+IL+
Sbjct: 311  ESW---TKEFILKNPSTDIIWYWDLYRPISLLSNGEILM 346


>ref|XP_002534512.1| conserved hypothetical protein [Ricinus communis]
           gi|223525141|gb|EEF27869.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 383

 Score = 77.4 bits (189), Expect = 9e-12
 Identities = 71/252 (28%), Positives = 115/252 (45%), Gaps = 27/252 (10%)
 Frame = +3

Query: 96  MDFLPDELTTEILNRLPTTESVLESKSVCIGWRTVLAEKRIGLLLGFTPRMGEENITRLF 275
           +D LP E+  +IL+R+ TT S+   K VC  WR  LA+  + + L F+ ++ E N   + 
Sbjct: 11  IDSLPREIMADILSRV-TTPSLFIIKFVCQSWRN-LAQDPLLVDLHFSHKI-ENNPCLIL 67

Query: 276 YREQIDEEDLNRMLQENNHDPDDGTYKMTSHPI------VGSCNGLVCFYVSHHHIKDHV 437
           + +   +  L  +    ++   DG       P+      VGSC G +C Y S H  K+  
Sbjct: 68  HSDHPTKNQLYALCLYPHNTSQDGMVMKIPVPVKLEFDVVGSCKGWLCLYDSLH--KNTF 125

Query: 438 YIMNPTTGEHLHLPRIAYPIPGPVTMWYPRNIIGGFGYCQSTGEYKVVRI---------- 587
           Y+ NP T   + LP   +    P  +W     + GFG+     +YKV+++          
Sbjct: 126 YMYNPFTNSCMELPISNF----PSDVW----TVLGFGFDPVRKKYKVLKVSYIRRTNNTA 177

Query: 588 ------HLDGNVEVHTLGDRRGWRNVGVIPY--TFQKSGVYAHGCIFWINQSER---NIH 734
                  L   V++ T+G    WR++G  PY      S VY +G + W+N   R      
Sbjct: 178 GERYGLSLRSEVQILTVGS-PSWRSLGETPYYPIHSPSQVYVNGRLHWVNWPVRYRPGRK 236

Query: 735 IVSFNLDMETFR 770
           ++SF+L+ E FR
Sbjct: 237 LISFDLEDEKFR 248


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