BLASTX nr result

ID: Papaver23_contig00016755 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016755
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   204   8e-51
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   203   2e-50
ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Sela...   188   8e-46
ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III s...   187   1e-45
ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycin...   181   1e-43

>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  204 bits (520), Expect = 8e-51
 Identities = 95/151 (62%), Positives = 116/151 (76%), Gaps = 6/151 (3%)
 Frame = +3

Query: 6   LGLCISVYDIKSIKGGFIFAGDGASTYTVDFRLIMFRPFEGEILSGKVDASDANGLRLSV 185
           LGLCISVYDI+SI GGF+F GDGASTYTV+FRL+MFRPF GEI++ K+  SDANGLRLS+
Sbjct: 42  LGLCISVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLRLSL 101

Query: 186 GFFKDISVPVHLLPNPSKFSEDGR------WTWIYNDVELTIEQDDEIRFRVHKISYPPI 347
           GFF DI +PVHL+PNP     +        W W Y + +  I+  DEIRF+V  +SYPPI
Sbjct: 102 GFFDDIYIPVHLMPNPCHCEPNPEKKGQVIWIWDYQEQKFPIDGIDEIRFQVQSVSYPPI 161

Query: 348 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 440
           P+EQ K+SK FAPMVI  S+D+DGLGP+SWW
Sbjct: 162 PVEQPKESKPFAPMVIMGSLDYDGLGPVSWW 192


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  203 bits (517), Expect = 2e-50
 Identities = 94/151 (62%), Positives = 116/151 (76%), Gaps = 6/151 (3%)
 Frame = +3

Query: 6   LGLCISVYDIKSIKGGFIFAGDGASTYTVDFRLIMFRPFEGEILSGKVDASDANGLRLSV 185
           LGLCISVYDI+SI GGF+F GDGASTYTV+FRL+MFRPF GEI++ K+  SDANGL+LS+
Sbjct: 42  LGLCISVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKESDANGLQLSL 101

Query: 186 GFFKDISVPVHLLPNPSKFSEDGR------WTWIYNDVELTIEQDDEIRFRVHKISYPPI 347
           GFF DI +PVHL+PNP     D        W W Y + +  I+  DEIRF+V  +SYPPI
Sbjct: 102 GFFDDIYIPVHLMPNPCHCEPDPENKSQVIWIWDYQEQKFPIDGLDEIRFQVQSVSYPPI 161

Query: 348 PLEQEKDSKAFAPMVITASIDFDGLGPISWW 440
           P+EQ K+SK FAPM+I  S+D+DGLGP+SWW
Sbjct: 162 PVEQPKESKPFAPMMIMGSLDYDGLGPVSWW 192


>ref|XP_002988954.1| hypothetical protein SELMODRAFT_128885 [Selaginella moellendorffii]
           gi|300143291|gb|EFJ09983.1| hypothetical protein
           SELMODRAFT_128885 [Selaginella moellendorffii]
          Length = 187

 Score =  188 bits (477), Expect = 8e-46
 Identities = 86/146 (58%), Positives = 113/146 (77%), Gaps = 1/146 (0%)
 Frame = +3

Query: 6   LGLCISVYDIKSIKGGFIFAGDGASTYTVDFRLIMFRPFEGEILSGKVDASDANGLRLSV 185
           LGLC+S+YDI+SI+GGF+F GDGA TYTV+F+L+MFRPF GEIL  K+   D NGL LS+
Sbjct: 42  LGLCVSLYDIQSIEGGFVFPGDGAPTYTVEFQLVMFRPFPGEILVAKLKKCDKNGLVLSM 101

Query: 186 GFFKDISVPVHLLPNPSKFSEDGR-WTWIYNDVELTIEQDDEIRFRVHKISYPPIPLEQE 362
           GFF+DI VP H L  PSKF E+ + W W Y + E+ ++ ++E+RFRV K+ YPPIPLEQE
Sbjct: 102 GFFEDIIVPHHQLQQPSKFDENEKLWVWNYQENEMFMDLEEEVRFRVLKVRYPPIPLEQE 161

Query: 363 KDSKAFAPMVITASIDFDGLGPISWW 440
           +D++ FAPM +   I+ DGLG +SWW
Sbjct: 162 RDAQPFAPMEVIGDINSDGLGLVSWW 187


>ref|XP_004135978.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like
           [Cucumis sativus] gi|449523449|ref|XP_004168736.1|
           PREDICTED: DNA-directed RNA polymerase III subunit
           RPC8-like [Cucumis sativus]
          Length = 226

 Score =  187 bits (476), Expect = 1e-45
 Identities = 94/167 (56%), Positives = 116/167 (69%), Gaps = 22/167 (13%)
 Frame = +3

Query: 6   LGLCISVYDIKSIKGGFIFAGDGASTYTVDFRLIMFRPFEGEILSGKVDASDANGLRLSV 185
           LGLCISVYDI+S+ GGFIF  DGA+TY V F LI+FRPF GE++ GKV  S+ NGLR+S+
Sbjct: 42  LGLCISVYDIRSVDGGFIFPSDGAATYKVVFTLIVFRPFTGEVIIGKVQESNENGLRISL 101

Query: 186 GFFKDISVPVHLLPNPSKFSEDG------RWTWIYNDVELTIEQDDEIRFRVHKISYPPI 347
           GFF+DI VPV L+P+ S+F+ D       RW WIYN+V   I + DEI+F+VH I YP I
Sbjct: 102 GFFEDIYVPVELMPSGSEFTPDENNGGRCRWVWIYNEVPFDIYESDEIKFKVHSIEYPAI 161

Query: 348 PLEQEKDS----------------KAFAPMVITASIDFDGLGPISWW 440
            +EQ K+S                K FAPMVITAS+D DGLGP+SWW
Sbjct: 162 LVEQPKESNSKFPMEEKPKESINVKPFAPMVITASLDQDGLGPVSWW 208


>ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycine max]
           gi|255644932|gb|ACU22966.1| unknown [Glycine max]
          Length = 214

 Score =  181 bits (459), Expect = 1e-43
 Identities = 89/165 (53%), Positives = 113/165 (68%), Gaps = 20/165 (12%)
 Frame = +3

Query: 6   LGLCISVYDIKSIKGGFIFAGDGASTYTVDFRLIMFRPFEGEILSGKVDASDANGLRLSV 185
           LGLCISVYDI+SI GGFIF GDGA TYTV F LIMFRPFE EI++ ++ +SDA+GLRL++
Sbjct: 42  LGLCISVYDIRSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSSDADGLRLTI 101

Query: 186 GFFKDISVPVHLLPNPSKF--------------------SEDGRWTWIYNDVELTIEQDD 305
           GFF DI +P   LP+P+ F                    S+ G W W YN+ E  I+  D
Sbjct: 102 GFFDDIYIPASRLPDPNHFVETEQKKRVFSGQESTTNSSSKKGVWYWDYNEQEYPIQDTD 161

Query: 306 EIRFRVHKISYPPIPLEQEKDSKAFAPMVITASIDFDGLGPISWW 440
             +FRV  +SYP IP+EQ K+SK FAPM+I+ ++D DGLGP+SWW
Sbjct: 162 VTKFRVTNVSYPQIPVEQPKESKPFAPMLISGAMDDDGLGPVSWW 206


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