BLASTX nr result

ID: Papaver23_contig00016643 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016643
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                171   6e-41
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta...   169   2e-40
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...   165   4e-39
gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]             163   2e-38
emb|CAB72467.1| putative protein [Arabidopsis thaliana]               162   2e-38

>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/167 (49%), Positives = 115/167 (68%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 324
           ISC NVIYK I+KI+A R+K +L T I    S F+  R + +NVL+A ELVK+YH+  +S
Sbjct: 105 ISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLIENVLLATELVKDYHKDSIS 164

Query: 323 ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 144
            RCA+KID++KA+ +V  + +  +L+   FP  F HW++LC+STA FS+ +NG   GFFG
Sbjct: 165 PRCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHWIKLCISTATFSVQVNGELAGFFG 224

Query: 143 SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRL 3
           SKRG+RQGC LSPY+FV+ M V + ++     H   G+HPKCK   L
Sbjct: 225 SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSL 271


>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1277

 Score =  169 bits (429), Expect = 2e-40
 Identities = 82/167 (49%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500  ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 324
            ISC NVIYK I+KI+A R+K +L T I    S F+  R + +NVL+A ELVK+YH+  +S
Sbjct: 674  ISCCNVIYKVISKIIANRLKVMLPTFILQNQSAFVRERLLMENVLLATELVKDYHKDSIS 733

Query: 323  ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 144
             RCA+KID++KA+ +V  + +  +L+   FP  F HW++LC+STA FS+ +N    GFFG
Sbjct: 734  PRCAMKIDISKAFDSVQWQFLLNTLEALKFPEKFRHWIKLCISTATFSVQVNSEQAGFFG 793

Query: 143  SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRL 3
            SKRG+RQGC LSPY+FV+ M V + ++     H   G+HPKCK   L
Sbjct: 794  SKRGLRQGCALSPYLFVICMNVLSHMIDVAAVHRNIGYHPKCKKLSL 840


>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score =  165 bits (417), Expect = 4e-39
 Identities = 79/167 (47%), Positives = 114/167 (68%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500  ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 324
            ISC NV+YK I+KILA R+K +L + I    S F+  R + +NVL+A ELVK+YH+  ++
Sbjct: 829  ISCCNVLYKVISKILANRLKLLLPSFILQNQSAFVKERLLMENVLLATELVKDYHKESVT 888

Query: 323  ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 144
             RCA+KID++KA+ +V  + +  +L+   FP  F HW++LC+STA FS+ +NG   GFFG
Sbjct: 889  PRCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHWIKLCISTATFSVQVNGELAGFFG 948

Query: 143  SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRL 3
            S RG+RQGC LSPY+FV+ M V + ++     H   G+HPKC+   L
Sbjct: 949  SSRGLRQGCALSPYLFVICMNVLSHMIDEAAVHRNIGYHPKCEKIGL 995


>gb|AAF87143.1|AC002423_8 T23E23.16 [Arabidopsis thaliana]
          Length = 653

 Score =  163 bits (412), Expect = 2e-38
 Identities = 79/167 (47%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
 Frame = -1

Query: 500 ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 324
           +SC NVIYK I+KI+A R+K +L   I+   + F+  R + +N+L+A ELVK+YH+  +S
Sbjct: 59  LSCCNVIYKIISKIIANRLKMVLPKFIAGNQTAFVKDRLLIENLLLATELVKDYHKESVS 118

Query: 323 ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 144
           +RCA+KID++KA+ +V    I   L    FP  F+HW+ LC+STA FS+ +NG   GFF 
Sbjct: 119 SRCAIKIDISKAFNSVQWSFIRNILLSMDFPMEFVHWIMLCISTASFSVQVNGELVGFFQ 178

Query: 143 SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCKSTRL 3
           SKRG+RQGC LSPY+FVM M+V + +L        FG+H +CK   L
Sbjct: 179 SKRGLRQGCSLSPYLFVMSMDVLSKLLDQAASAKKFGYHSRCKELSL 225


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/163 (48%), Positives = 111/163 (68%), Gaps = 1/163 (0%)
 Frame = -1

Query: 500 ISCYNVIYKCITKILAVRMKTILRTIISAK*SEFISGRSIQDNVLVAHELVKNYHRP-LS 324
           ISC NV+YK I+KILA R+K +L   I+   S F+  R + +NVL+A +LVK+YH+  +S
Sbjct: 85  ISCCNVMYKVISKILANRLKLLLPQFIAGNQSSFVKDRLLIENVLLATDLVKDYHKDSIS 144

Query: 323 ARCALKIDLTKAYVTVN*KIICVSLQKFGFPSMFIHWVQLCLSTAKFSIMINGAPYGFFG 144
            RCA+KID++KA  +V    +  +L    FP MFIHW++LC++T  FS+ +NG   GFF 
Sbjct: 145 ERCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHWIRLCITTPSFSVQVNGELAGFFQ 204

Query: 143 SKRGIRQGCPLSPYIFVMVMEVFNSILQAQVDHGLFGFHPKCK 15
           S RG+RQGC LSPY+FV+ M+V + +L   V  G  G+HP CK
Sbjct: 205 SSRGLRQGCALSPYLFVICMDVLSKLLDKVVGIGRIGYHPHCK 247


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