BLASTX nr result

ID: Papaver23_contig00016602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016602
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    65   2e-12
ref|XP_002299133.1| predicted protein [Populus trichocarpa] gi|2...    79   2e-12
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...    65   2e-11
ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...    69   3e-11
gb|AAR15468.1| F-box protein [Capsella rubella]                        69   1e-09

>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score = 64.7 bits (156), Expect(2) = 2e-12
 Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 4/196 (2%)
 Frame = -1

Query: 724 NSSSTSLVVNNDDLLIKIXXXXXXXXXXXXXXVSKHWYSLISSPYFMQKHCVLHNNKLSI 545
           ++SS   V  N DLL +I              VSK W SLIS P+F  +H     +  S+
Sbjct: 25  STSSAEQVAGNGDLLTEIFLRTPVKPLLRFRSVSKRWLSLISDPHFCHRHA--RRSSASV 82

Query: 544 SGLYFLCHAPNNEQHIPTYGALLLDKAKISTSVVSFPIQVNEQPGG--GLYIQQSCNGLL 371
            G+  L   PN+      +  +  D+ K S      P++  +  G   G+ + Q CNGLL
Sbjct: 83  PGV--LLGLPNS-----NFDFISFDEKKASEP----PLRSLDFIGDPLGVKVLQVCNGLL 131

Query: 370 LCRRPGHLTGTR--YIYNPSTRNYRMIPPPPPFQNENMNLSSSCYWHFYLAFSPHKSLNY 197
            C     L  +R  YI N +TR + ++PPP      +        +   LAF P KS  Y
Sbjct: 132 CCSTVRSLGTSRNYYICNLATRRFSVLPPPCSSGGRD------TVFGINLAFDPSKSPYY 185

Query: 196 EVVFLWRTGYDIAHYK 149
            V+ +      I+HY+
Sbjct: 186 SVICVRSCEVSISHYQ 201



 Score = 34.3 bits (77), Expect(2) = 2e-12
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
 Frame = -3

Query: 137 SPKTGSWRLCGD-VELDFKLLSYHCVSWNGFLNWI--DGRTLYY 15
           S  TG WRL G      F ++ Y  V WNG ++WI   G +LY+
Sbjct: 206 SSGTGDWRLSGKPFRAPFDMVFYDGVFWNGAVHWISPSGASLYF 249


>ref|XP_002299133.1| predicted protein [Populus trichocarpa] gi|222846391|gb|EEE83938.1|
           predicted protein [Populus trichocarpa]
          Length = 328

 Score = 78.6 bits (192), Expect = 2e-12
 Identities = 61/194 (31%), Positives = 87/194 (44%), Gaps = 8/194 (4%)
 Frame = -1

Query: 745 ISAGNDENSSSTSLVVNNDDLLIKIXXXXXXXXXXXXXXVSKHWYSLISSPYFMQKHCVL 566
           +++   +NS S   V+ NDDL+ +I              VSK W S+IS+  F  +H   
Sbjct: 8   LTSPKQKNSPSIDAVLGNDDLVTEILLRVPAKAVLRFELVSKKWLSIISNTSFATRH--T 65

Query: 565 HNNKLSISGLYFLCHAPNNEQHIPTYGALLLD---KAKISTSVVSFPIQVNEQPGGGLYI 395
           H N  ++S L  L       +  PT+  + LD    A  S + + F    N    G +Y+
Sbjct: 66  HLNPHTVSAL--LLRVSFFSKEPPTHKYVSLDGKSSAYFSYNFLDFDPSNNP---GCIYV 120

Query: 394 QQSCNGLLLCRR-----PGHLTGTRYIYNPSTRNYRMIPPPPPFQNENMNLSSSCYWHFY 230
            QSCNGLLLC +     P       YI+NP+TR + M+PPPP             +    
Sbjct: 121 SQSCNGLLLCSKCRRDLPERSQPINYIFNPTTRQFAMLPPPPD--------DGQFFDSIQ 172

Query: 229 LAFSPHKSLNYEVV 188
           L F P +S  Y VV
Sbjct: 173 LVFDPSESSCYRVV 186


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score = 65.5 bits (158), Expect(2) = 2e-11
 Identities = 62/213 (29%), Positives = 91/213 (42%), Gaps = 2/213 (0%)
 Frame = -1

Query: 760 MNTLRISAGNDENSSSTSLVVNNDDLLIKIXXXXXXXXXXXXXXVSKHWYSLISSPYFMQ 581
           M TL  S+  +   SS  +V +NDDLL ++              VSKHW SLI+ P+F +
Sbjct: 1   MRTLEESSSQE---SSAHIVASNDDLLSELLLRLPIKSLLKFKSVSKHWLSLITDPHFSR 57

Query: 580 KHCVLHNNKLSISGLYFLCHAPNNEQHIPTYGALLLDKAKISTSVVSFPIQVNEQPGGGL 401
           +  +  N    +S L+           +P      LD  + S    S     + +   G+
Sbjct: 58  RKNLKPN---PVSALF---------SFVP------LDPLQTSAPFTSLTFVDHPR---GI 96

Query: 400 YIQQSCNGLLLCRRPGHLTGTR--YIYNPSTRNYRMIPPPPPFQNENMNLSSSCYWHFYL 227
            I QSCNGL  C    +    R  YIYNP+T+ +  +PP           S        L
Sbjct: 97  EILQSCNGLFCCSSVDYNDSERKYYIYNPTTKQFTTLPP-------LCGRSVRRVLGVNL 149

Query: 226 AFSPHKSLNYEVVFLWRTGYDIAHYKHQMAVLK 128
           AF P KS  Y+VV + R      H + Q++ L+
Sbjct: 150 AFDPSKSHTYKVVCVQRCKSSYDHCQIQISSLE 182



 Score = 29.6 bits (65), Expect(2) = 2e-11
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 6/51 (11%)
 Frame = -3

Query: 137 SPKTGSWRLCG-----DVELDFKLLSYHCVSWNGFLNWIDGR-TLYYFNIN 3
           S +TG WR+ G      + +DF    Y    WNG ++WI  R    YF++N
Sbjct: 180 SLETGPWRVSGVPFAAPISVDFPSGVY----WNGAIHWISPREASLYFDLN 226


>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score = 68.9 bits (167), Expect(2) = 3e-11
 Identities = 61/195 (31%), Positives = 92/195 (47%), Gaps = 2/195 (1%)
 Frame = -1

Query: 727 ENSSSTSLVVNNDDLLIKIXXXXXXXXXXXXXXVSKHWYSLISSPYFMQKHCVLHNNKLS 548
           ++S S  ++ +N+DL+ +I              VSK W SLIS+P+F   H  L N   +
Sbjct: 2   DSSLSAEIIGSNEDLITQILLRLPVKPLLRFKSVSKQWLSLISTPHFSSLH-TLRNPNHT 60

Query: 547 ISGLYFLCHAPNNEQHIPTYGALLLDKAKISTSVVSFPIQVNEQPGGGLYIQQSCNGLLL 368
           IS L FL ++P        +  L L  +  S+S  + P+  +     G+ I QSCNGLLL
Sbjct: 61  ISAL-FLRNSPLE------FKFLSLSSSSSSSSSSASPLSFD--LFHGIKILQSCNGLLL 111

Query: 367 CRRPGHLTGTR--YIYNPSTRNYRMIPPPPPFQNENMNLSSSCYWHFYLAFSPHKSLNYE 194
           C     +   R  YI NP+T+    +   P    +    S +  +   LAF P KS NY+
Sbjct: 112 CSTLPKIGQKRNYYISNPTTKQMFTL---PSLVGDANAASPTTLFGLNLAFDPLKSCNYK 168

Query: 193 VVFLWRTGYDIAHYK 149
           V+ +  T   I  Y+
Sbjct: 169 VICVRSTTNSIYQYQ 183



 Score = 25.8 bits (55), Expect(2) = 3e-11
 Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
 Frame = -3

Query: 122 SWRLCG-DVELDFKLLSYHCVSWNGFLNWID--GRTLYY 15
           +WRL G      F ++  + V WNG ++WI   G  +Y+
Sbjct: 193 AWRLSGLPFVAPFDMVFDNGVFWNGAIHWISATGNAIYF 231


>gb|AAR15468.1| F-box protein [Capsella rubella]
          Length = 417

 Score = 69.3 bits (168), Expect = 1e-09
 Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 5/189 (2%)
 Frame = -1

Query: 724 NSSSTSLVVNNDDLLIKIXXXXXXXXXXXXXXVSKHWYSLISSPYFMQKHCVLHNNKLSI 545
           +SSS ++V   DD+LI+I              VSK W+SLI++P F  +  +  N+ L +
Sbjct: 24  SSSSATIVAEIDDILIQILSLLPIKTLLRSKRVSKRWFSLITNPDFSNR-VIKSNHPLPV 82

Query: 544 SGLYFLCHAPNNEQHIPTYGALLLDKAKISTSV-VSFPIQVNEQPGGGLYIQQSCNGLLL 368
           SG  F  H P    +  ++ +L  D   I+  +  S P+   +     + I QS NGLLL
Sbjct: 83  SG--FFLHLPRAIMY--SFVSLDGDDDAINQRISSSLPLWFTDH-STDMIIMQSTNGLLL 137

Query: 367 CR----RPGHLTGTRYIYNPSTRNYRMIPPPPPFQNENMNLSSSCYWHFYLAFSPHKSLN 200
           CR             Y+YNP+T+ Y ++PP            ++ Y    LAF P  S +
Sbjct: 138 CRCACASSNQFKTNYYVYNPTTKQYTLLPP-----------VTTGYITLSLAFDPSTSPH 186

Query: 199 YEVVFLWRT 173
           Y+ VF +RT
Sbjct: 187 YK-VFCFRT 194


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