BLASTX nr result
ID: Papaver23_contig00016572
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Papaver23_contig00016572 (823 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia... 64 4e-12 emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 59 3e-11 >ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana] gi|9294184|dbj|BAB02086.1| reverse transcriptase-like protein [Arabidopsis thaliana] gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein [Arabidopsis thaliana] Length = 343 Score = 64.3 bits (155), Expect(2) = 4e-12 Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 10/176 (5%) Frame = -1 Query: 499 DTTIKSLFSSWLRGKGDFKVFRMGSCIMWAIWTSRNEKIFNNVEPNFPRIIQEG----QY 332 +T ++ L SS L + ++F + I+W +W SRN+ +F ++ +Q Q Sbjct: 98 ETKMELLLSSCLANRQP-QLFNLAIWILWRLWKSRNQLVFQQKSISWQNTLQRARNDVQE 156 Query: 331 W--FNYYVDVPNE-VTVSITQQPGIHRTRMQTEDKWEPPETNWIKLNTDAAFYANT--GA 167 W N YV N+ V S QQP + RT KW+ P + WIK N D AF T Sbjct: 157 WEDTNTYVQSLNQQVHSSRHQQPTMART------KWQRPPSTWIKYNYDGAFNHQTRNAK 210 Query: 166 CAVVARNSNTKFEAGG-SCGYNCYSPLEAETKAVLLAFELAEKKDWKGITIESDAE 2 + R+ N + G + G LE+E +A+++A + A + ++ + E D++ Sbjct: 211 AGWLMRDENGVYMGSGQAIGSTTSDSLESEFQALIIAMQHAWSQGYRKVIFEGDSK 266 Score = 33.1 bits (74), Expect(2) = 4e-12 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%) Frame = -2 Query: 708 WKLKNIIPKVQMFIWRVLQNGLALMQNMCRFIM----GMDLCGLNPETTDHLFLNVL*PE 541 WKLK PK++ F+W++L LA N+ R + C ET+ HLF + + Sbjct: 19 WKLKTA-PKIKHFLWKLLSGALATGDNLKRRHIRNHPQCHRCCQEDETSQHLFFDCFYAQ 77 Query: 540 Q 538 Q Sbjct: 78 Q 78 >emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris] Length = 1357 Score = 58.9 bits (141), Expect(2) = 3e-11 Identities = 46/156 (29%), Positives = 70/156 (44%), Gaps = 7/156 (4%) Frame = -1 Query: 451 DFKVFRMGSCIMWAIWTSRNEKIFNNVEPNF----PRIIQEGQYWFNYYVDVPNEVTVSI 284 D KV + G I+W +W RN ++F + RI+++ + + NY V + + S Sbjct: 1132 DAKVVQKGCYILWNVWVERNRRVFEHTSQPATVVGQRIMRQVEDFNNYAVKIYGGMRSSA 1191 Query: 283 TQQPGIHRTRMQTEDKWEPPETNWIKLNTDAAFYANTG--ACAVVARNSNTKFEAGGSCG 110 P +W P IKLNTDA+ A G V+AR+S K + Sbjct: 1192 ALSP----------SRWYAPPVGAIKLNTDASL-AEEGWVGLGVIARDSEGKVCFAATRR 1240 Query: 109 YNCYSPLE-AETKAVLLAFELAEKKDWKGITIESDA 5 Y P E AE KA+ +A LA+ + + ESD+ Sbjct: 1241 VRAYWPPEVAECKAIYMATRLAQAHGYGDVIFESDS 1276 Score = 35.4 bits (80), Expect(2) = 3e-11 Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%) Frame = -2 Query: 720 WKLFWKLKNIIPKVQMFIWRVLQNGLALMQNMCRFIM----GMDLCGLNPETTDHLF 562 W + W L N+ PKV+ F+WR + L + + + R + G C ET HLF Sbjct: 1039 WNILWSL-NVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQFHLF 1094