BLASTX nr result

ID: Papaver23_contig00016244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00016244
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]   248   2e-63
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...   247   3e-63
gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tub...   226   6e-57
ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...   220   5e-55
ref|XP_002531259.1| RNA binding protein, putative [Ricinus commu...   213   8e-53

>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score =  248 bits (632), Expect = 2e-63
 Identities = 133/193 (68%), Positives = 154/193 (79%)
 Frame = -1

Query: 924 KETHK*KMGSRLGKRVINFTNLPIKLLMPSSFDHIKEIALKTIPSASKIEIRRVLESLYG 745
           K+    KMGSRLG+RVINFTNLPIKLLMPSSF +IKEIALKT+PSASKIEI+RVLESLYG
Sbjct: 303 KQNEGSKMGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYG 362

Query: 744 FEVEEVRTLNMEGKKKKRGGILIAKPDYKKAYVTLKHPLSLSQDLFPIRMIQEDKKATDK 565
           FEVE+VRTLNMEGKKKKRGG+LIAKPDYKKAY+TLK+PLS+S DL+PIR+I+E+KK T+K
Sbjct: 363 FEVEKVRTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNK 422

Query: 564 QPKSSIVEEGGEVKSHWLDGQGTKRYIRPGKQGYARDTNPNFKERRSNYRGGQGSRGEQE 385
           Q KSSIVEE GE KSHWLDG+   R+ RP K    R             RGG+G  G   
Sbjct: 423 QSKSSIVEE-GEAKSHWLDGKDGDRF-RPEKSSAERG------------RGGRG--GAAA 466

Query: 384 ATSKFPWSNMRSA 346
           A +KFPWS MR++
Sbjct: 467 AAAKFPWSGMRAS 479


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  247 bits (631), Expect = 3e-63
 Identities = 128/186 (68%), Positives = 150/186 (80%)
 Frame = -1

Query: 903 MGSRLGKRVINFTNLPIKLLMPSSFDHIKEIALKTIPSASKIEIRRVLESLYGFEVEEVR 724
           MGSRLG+RVINFTNLPIKLLMPSSF +IKEIALKT+PSASKIEI+RVLESLYGFEVE+VR
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 723 TLNMEGKKKKRGGILIAKPDYKKAYVTLKHPLSLSQDLFPIRMIQEDKKATDKQPKSSIV 544
           TLNMEGKKKKRGG+LIAKPDYKKAY+TLK+PLS+S DL+PIR+I+E+KK T+KQ KSSIV
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 543 EEGGEVKSHWLDGQGTKRYIRPGKQGYARDTNPNFKERRSNYRGGQGSRGEQEATSKFPW 364
           EE GE KSHWLDG+   R                F+  +S+   G+G RG   A +KFPW
Sbjct: 121 EE-GEAKSHWLDGKDGDR----------------FRPEKSSAERGRGGRGGAAAAAKFPW 163

Query: 363 SNMRSA 346
           S MR++
Sbjct: 164 SGMRAS 169


>gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
          Length = 188

 Score =  226 bits (577), Expect = 6e-57
 Identities = 120/188 (63%), Positives = 143/188 (76%)
 Frame = -1

Query: 903 MGSRLGKRVINFTNLPIKLLMPSSFDHIKEIALKTIPSASKIEIRRVLESLYGFEVEEVR 724
           MGSRLG+RV+NF NLPIKLLMPSSF +I EI+LKTIPSASKIEI+RVLESLYGFEVE+V+
Sbjct: 1   MGSRLGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQ 60

Query: 723 TLNMEGKKKKRGGILIAKPDYKKAYVTLKHPLSLSQDLFPIRMIQEDKKATDKQPKSSIV 544
           TLNM+GKKKKRGG+LIAKPDYKKAYVTL++PLS+S DLFPI +IQE+KK   K+ KSSIV
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDLFPIGVIQEEKKNMSKKSKSSIV 120

Query: 543 EEGGEVKSHWLDGQGTKRYIRPGKQGYARDTNPNFKERRSNYRGGQGSRGEQEATSKFPW 364
           E+    K HWLD +   R     + G  RD     +      RGG+  R    A +KFPW
Sbjct: 121 EDDEPKKMHWLDEKKDGRNRSEMRFGRGRDHRSGQRSDVGRDRGGE-HRDVGAAAAKFPW 179

Query: 363 SNMRSASP 340
           S+MRS +P
Sbjct: 180 SSMRSYAP 187


>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  220 bits (560), Expect = 5e-55
 Identities = 121/188 (64%), Positives = 146/188 (77%), Gaps = 3/188 (1%)
 Frame = -1

Query: 903 MGSRLGKRVINFTNLPIKLLMPSSFDHIKEIALKTIPSASKIEIRRVLESLYGFEVEEVR 724
           MGSRLG+RV++F NLPIKLLMP+SF +I EIALKTIPSASKIEI+RVLESLYGFEV++V+
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 723 TLNMEGKKKKRGGILIAKPDYKKAYVTLKHPLSLSQDLFPIRMIQEDKKATDKQPKSSIV 544
           TLNMEGKKKKRGGILIAKPDYKKAYVTL++PLS+S D++PIR+I+EDK+  +KQ KSSIV
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 543 EEGGEVKSHWL---DGQGTKRYIRPGKQGYARDTNPNFKERRSNYRGGQGSRGEQEATSK 373
           EE GE K HWL   +  G K Y     +G+A          R   R G G+    E ++K
Sbjct: 121 EE-GEAKKHWLHEKEPVGIKTY-----KGFA---------DRGRRRSGGGAE-TVEPSTK 164

Query: 372 FPWSNMRS 349
           FPWS+MRS
Sbjct: 165 FPWSSMRS 172


>ref|XP_002531259.1| RNA binding protein, putative [Ricinus communis]
           gi|223529144|gb|EEF31123.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 174

 Score =  213 bits (541), Expect = 8e-53
 Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 1/187 (0%)
 Frame = -1

Query: 903 MGSRLGKRVINFTNLPIKLLMPSSFDHIKEIALKTIPSASKIEIRRVLESLYGFEVEEVR 724
           M SR+G RV++F NLPIKLLMP +F++I+E ALKTIPSASKIEI+RVLESLYGFEV++VR
Sbjct: 1   MASRVGGRVVHFANLPIKLLMPKTFNNIEEFALKTIPSASKIEIKRVLESLYGFEVDKVR 60

Query: 723 TLNMEGKKKKRGGILIAKPDYKKAYVTLKHPLSLSQDLFPIRMIQEDKKATDKQPKSSIV 544
           TLNMEGKKKKRGG L AKPDYKKAY+TLK+PLS+S DL+P+R+I EDK+  +K+ KSSIV
Sbjct: 61  TLNMEGKKKKRGGFLAAKPDYKKAYITLKNPLSISPDLYPVRIIAEDKERMNKERKSSIV 120

Query: 543 EEGGEVKSHWLDGQGTKRYIRPGKQGYARDTNPNFKERRSNYRGGQGSRGEQ-EATSKFP 367
           ++ GE K HWLD +   +             N  F   + N RGG+    E   A SKFP
Sbjct: 121 DD-GEGKKHWLDDKKKMK-------------NERFGNEKRNSRGGRDFHVENANANSKFP 166

Query: 366 WSNMRSA 346
           W++MR++
Sbjct: 167 WTSMRTS 173


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