BLASTX nr result

ID: Papaver23_contig00015397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00015397
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319997.1| predicted protein [Populus trichocarpa] gi|2...    85   5e-31
ref|XP_004133752.1| PREDICTED: probable rhamnogalacturonate lyas...    82   1e-30
ref|XP_002527245.1| lyase, putative [Ricinus communis] gi|223533...    80   3e-30
ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|2...    82   4e-30
ref|NP_179847.1| rhamnogalacturonate lyase-like protein [Arabido...    86   6e-30

>ref|XP_002319997.1| predicted protein [Populus trichocarpa] gi|222860770|gb|EEE98312.1|
           predicted protein [Populus trichocarpa]
          Length = 625

 Score = 84.7 bits (208), Expect(2) = 5e-31
 Identities = 38/50 (76%), Positives = 40/50 (80%)
 Frame = -2

Query: 231 KYMYSVENKDTGVHGWISANPRVGFWIITASNEFLVGGPHKQDLTSHAGP 82
           KY YS ENKD  VHGWIS NP VGFW+ITAS+EF  GGP KQDLTSH GP
Sbjct: 187 KYHYSCENKDNRVHGWISENPPVGFWMITASDEFRAGGPLKQDLTSHVGP 236



 Score = 74.7 bits (182), Expect(2) = 5e-31
 Identities = 35/67 (52%), Positives = 44/67 (65%)
 Frame = -3

Query: 512 GFPEFSLAEARVSFELSSAMFHHMTVSDTMQREMPAYEDHQKGQPLAYPEAVLLTNPVNP 333
           G+P+  + + R+ F+L +  FH M +SD  QR MP   D   G+PLAYPEAVLLTNP NP
Sbjct: 119 GWPDMDMDQIRIVFKLQNDKFHFMAISDDRQRIMPMPRDRISGEPLAYPEAVLLTNPTNP 178

Query: 332 VHKGEVD 312
              GEVD
Sbjct: 179 QLGGEVD 185


>ref|XP_004133752.1| PREDICTED: probable rhamnogalacturonate lyase B-like [Cucumis
           sativus] gi|449478079|ref|XP_004155216.1| PREDICTED:
           probable rhamnogalacturonate lyase B-like [Cucumis
           sativus]
          Length = 616

 Score = 81.6 bits (200), Expect(2) = 1e-30
 Identities = 36/50 (72%), Positives = 41/50 (82%)
 Frame = -2

Query: 231 KYMYSVENKDTGVHGWISANPRVGFWIITASNEFLVGGPHKQDLTSHAGP 82
           KY YS E+KD  VHGWIS++P VGFW+IT S+EF V GP KQDLTSHAGP
Sbjct: 185 KYQYSTEDKDNQVHGWISSDPPVGFWMITPSDEFRVAGPVKQDLTSHAGP 234



 Score = 76.6 bits (187), Expect(2) = 1e-30
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -3

Query: 512 GFPEFSLAEARVSFELSSAMFHHMTVSDTMQREMPAYEDHQKGQPLAYPEAVLLTNPVNP 333
           G+P+  + + R+ F+L S MF +M VSD  QR MP   D + G+PLA+PEAVLLTNP N 
Sbjct: 117 GWPQIEMDQVRIVFKLQSQMFDYMAVSDDRQRVMPTMRDRENGEPLAFPEAVLLTNPSNE 176

Query: 332 VHKGEVD 312
             +GEVD
Sbjct: 177 ELRGEVD 183


>ref|XP_002527245.1| lyase, putative [Ricinus communis] gi|223533421|gb|EEF35171.1|
           lyase, putative [Ricinus communis]
          Length = 621

 Score = 79.7 bits (195), Expect(2) = 3e-30
 Identities = 35/50 (70%), Positives = 39/50 (78%)
 Frame = -2

Query: 231 KYMYSVENKDTGVHGWISANPRVGFWIITASNEFLVGGPHKQDLTSHAGP 82
           KY YS E++D  VHGW S +P VGFW+IT SNEF VGGP KQDLTSH GP
Sbjct: 188 KYQYSCEDEDNKVHGWTSDDPPVGFWMITPSNEFRVGGPMKQDLTSHVGP 237



 Score = 77.4 bits (189), Expect(2) = 3e-30
 Identities = 38/67 (56%), Positives = 44/67 (65%)
 Frame = -3

Query: 512 GFPEFSLAEARVSFELSSAMFHHMTVSDTMQREMPAYEDHQKGQPLAYPEAVLLTNPVNP 333
           G+P+  + + RV F+L    FH M VSD  QR MP  ED   GQPLAYPEAVLLT P NP
Sbjct: 120 GWPDVDMDQIRVVFKLRQEKFHFMAVSDDRQRIMPMPEDRATGQPLAYPEAVLLTRPTNP 179

Query: 332 VHKGEVD 312
             +GEVD
Sbjct: 180 ELRGEVD 186


>ref|XP_002308510.1| predicted protein [Populus trichocarpa] gi|222854486|gb|EEE92033.1|
           predicted protein [Populus trichocarpa]
          Length = 674

 Score = 81.6 bits (200), Expect(2) = 4e-30
 Identities = 35/50 (70%), Positives = 40/50 (80%)
 Frame = -2

Query: 231 KYMYSVENKDTGVHGWISANPRVGFWIITASNEFLVGGPHKQDLTSHAGP 82
           KY YS E+KD  VHGW + +P VGFW+IT SNEF VGGP+KQDLTSH GP
Sbjct: 243 KYQYSCEDKDNKVHGWTAEDPPVGFWMITPSNEFRVGGPNKQDLTSHVGP 292



 Score = 74.7 bits (182), Expect(2) = 4e-30
 Identities = 35/67 (52%), Positives = 46/67 (68%)
 Frame = -3

Query: 512 GFPEFSLAEARVSFELSSAMFHHMTVSDTMQREMPAYEDHQKGQPLAYPEAVLLTNPVNP 333
           G+P+  + + RV F+L    FH+M +SD+ +R MP  ED   GQPLAYPEAVLLT P+N 
Sbjct: 175 GWPDVDMDQIRVVFKLQKDKFHYMALSDSRKRTMPMPEDRVSGQPLAYPEAVLLTKPINL 234

Query: 332 VHKGEVD 312
             +GEVD
Sbjct: 235 KLRGEVD 241


>ref|NP_179847.1| rhamnogalacturonate lyase-like protein [Arabidopsis thaliana]
           gi|4314359|gb|AAD15570.1| unknown protein [Arabidopsis
           thaliana] gi|330252235|gb|AEC07329.1|
           rhamnogalacturonate lyase-like protein [Arabidopsis
           thaliana]
          Length = 677

 Score = 85.9 bits (211), Expect(2) = 6e-30
 Identities = 37/50 (74%), Positives = 44/50 (88%)
 Frame = -2

Query: 231 KYMYSVENKDTGVHGWISANPRVGFWIITASNEFLVGGPHKQDLTSHAGP 82
           KYMYS+E+KD  VHGWIS++P VGFW+IT S+EF +GGP KQDLTSHAGP
Sbjct: 246 KYMYSMEDKDNNVHGWISSDPPVGFWMITPSDEFRLGGPIKQDLTSHAGP 295



 Score = 70.1 bits (170), Expect(2) = 6e-30
 Identities = 32/67 (47%), Positives = 44/67 (65%)
 Frame = -3

Query: 512 GFPEFSLAEARVSFELSSAMFHHMTVSDTMQREMPAYEDHQKGQPLAYPEAVLLTNPVNP 333
           G+P+  + + R+ F+L+   F  M +SD  QR MP+  D +  + LAY EAVLLTNP NP
Sbjct: 178 GWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMADRENSKSLAYKEAVLLTNPSNP 237

Query: 332 VHKGEVD 312
           + KGEVD
Sbjct: 238 MFKGEVD 244


Top