BLASTX nr result
ID: Papaver23_contig00015075
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00015075
(1610 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containi... 701 0.0
ref|XP_002528404.1| pentatricopeptide repeat-containing protein,... 693 0.0
ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containi... 669 0.0
ref|NP_567856.1| pentatricopeptide repeat-containing protein [Ar... 628 e-177
emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|726998... 628 e-177
>ref|XP_003634022.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Vitis vinifera]
gi|297745081|emb|CBI38673.3| unnamed protein product
[Vitis vinifera]
Length = 900
Score = 701 bits (1809), Expect = 0.0
Identities = 339/520 (65%), Positives = 424/520 (81%)
Frame = +2
Query: 50 DDALESAVDNISMDSSVGHCNFILKQLECCNDDKALSFFEWMRINGKLKDNVVAYNVALK 229
DD ++ I + SV CN ILK LE C+D K + FFEWMR NGKL+ NV AYN+AL+
Sbjct: 121 DDEIDVNEYGIGPELSVERCNAILKGLERCSDSKTMKFFEWMRENGKLEGNVSAYNLALR 180
Query: 230 VLGRKEDWMAAEGLLQQVISDSGRRLSFQVFNTLIYACFRKGYGDLATKWFRLMLENGVR 409
VLGR+ DW AAE ++ ++ DS +++FQV+NTLIYAC+++G+ +L TKWFRLMLENGVR
Sbjct: 181 VLGRRGDWDAAETMIWEMNGDSDCQVNFQVYNTLIYACYKQGHVELGTKWFRLMLENGVR 240
Query: 410 PNVATFGMLTSLYQKSANVADAEFVFEKMRGFKLQCQSAYSAMITIYTRLGLYGKSEEII 589
PNVATFGM+ SLYQK NVAD+E+ F +MR F + CQSAYSAMITIYTR+ LY K+EE+I
Sbjct: 241 PNVATFGMVMSLYQKGWNVADSEYAFSQMRSFGITCQSAYSAMITIYTRMSLYDKAEEVI 300
Query: 590 GFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTLITGYGKV 769
F++ED+V+ NLENWLV LNAYSQQGKL EAE VL M+ AG SPNIVAYN LITGYGK
Sbjct: 301 DFIQEDKVILNLENWLVLLNAYSQQGKLQEAERVLFSMQNAGFSPNIVAYNMLITGYGKA 360
Query: 770 SNMDAAQLLFHNLANVGLEADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNF 949
SNMDAAQ +F NL NVGLE DE++YRSM+EGWGRA NYKE +WYY++L GFKPNSSN
Sbjct: 361 SNMDAAQHIFRNLKNVGLEPDESTYRSMIEGWGRAENYKEAEWYYNELKRLGFKPNSSNL 420
Query: 950 FTIINLQVRNKDDEGVIATLNDMRRMGCQYSSIISSVVQAYEKVRRVNKVPLVLRGSFYS 1129
+T+INLQ + D E TL+DM+R+GCQYSS++ +++QAYE+ R+++VPL+L+GSFY
Sbjct: 421 YTMINLQAKYADGEDAARTLDDMKRIGCQYSSVLGTLLQAYERAGRIDRVPLILKGSFYE 480
Query: 1130 HVLVDQTSCSILVMAYVKHQLVDDALQILKGKKWKDNIFEDNLYHLLICSCKESDHREDA 1309
+VLV+QTSCSILVMAYVKH LVDDA+++L+ K+WKD IFEDNLYHL+ICSCKE E+A
Sbjct: 481 YVLVNQTSCSILVMAYVKHCLVDDAIKVLQEKQWKDTIFEDNLYHLVICSCKELGRLENA 540
Query: 1310 VRIFTQMPTFEGNPNLHIACTMIDIYGFMGRFNEAKDLYLKLKSSGIALDMVTYSVVVRM 1489
V+I++QMP PNLHI CTMIDIY +GRF++A++LYLKLKSS I+LDM+ +S+VVRM
Sbjct: 541 VKIYSQMP--NKKPNLHIMCTMIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRM 598
Query: 1490 YVKSGSLKEASLVLYDMEKQKEIVPDVFLFRDMLRIYQQC 1609
YVKSGSLK+A VL M++QK IVPD++LF DMLRIYQQC
Sbjct: 599 YVKSGSLKDACSVLETMDEQKNIVPDIYLFCDMLRIYQQC 638
Score = 83.6 bits (205), Expect = 1e-13
Identities = 66/329 (20%), Positives = 144/329 (43%), Gaps = 1/329 (0%)
Frame = +2
Query: 536 MITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGVLREMREA- 712
MI IY+ LG + +E + ++ + ++ + + + Y + G L +A VL M E
Sbjct: 560 MIDIYSTLGRFSDAENLYLKLKSSEISLDMIAFSIVVRMYVKSGSLKDACSVLETMDEQK 619
Query: 713 GTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGWGRANNYKET 892
P+I + ++ Y + +D Q L++ + G+ D Y ++ RA E
Sbjct: 620 NIVPDIYLFCDMLRIYQQCGMLDKLQDLYYRILKTGVTWDSEMYNCVINCCARALPVDEL 679
Query: 893 KWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDMRRMGCQYSSIISSVVQAY 1072
+D+++ GF PN+ ++++ +++ + L R+ G ++++ AY
Sbjct: 680 SRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWLARKRGLVDVISYNTIIAAY 739
Query: 1073 EKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAYVKHQLVDDALQILKGKKWKDNIFED 1252
+ + + K+ +R ++ V + ++ +Y K ++ +L+ K +
Sbjct: 740 GQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQIESFRSVLRRMKESSCASDH 799
Query: 1253 NLYHLLICSCKESDHREDAVRIFTQMPTFEGNPNLHIACTMIDIYGFMGRFNEAKDLYLK 1432
Y+++I E E+ + T++ P+L T+I YG G +A L +
Sbjct: 800 YTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTLIKAYGIAGMVEDAVVLVKE 859
Query: 1433 LKSSGIALDMVTYSVVVRMYVKSGSLKEA 1519
++ +GI D +TY ++ K+ EA
Sbjct: 860 MRENGIQPDRITYINLINALRKNDEFLEA 888
Score = 75.1 bits (183), Expect = 5e-11
Identities = 56/239 (23%), Positives = 108/239 (45%)
Frame = +2
Query: 314 QVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSANVADAEFVFEK 493
+++N +I C R D ++ F ML +G PN T ++ +Y KS A V
Sbjct: 661 EMYNCVINCCARALPVDELSRLFDEMLLHGFAPNTITLNVMLDVYGKSRLFKKARKVLWL 720
Query: 494 MRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKL 673
R L +Y+ +I Y + K + M+ + +LE + L++Y ++G++
Sbjct: 721 ARKRGLVDVISYNTIIAAYGQSKDLKKMLSTVRQMQFNGFSVSLEVYNCMLDSYGKEGQI 780
Query: 674 VEAEGVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSM 853
VLR M+E+ + + YN +I YG+ ++ + L GL D SY ++
Sbjct: 781 ESFRSVLRRMKESSCASDHYTYNIMINIYGEQGWIEEVANVLTELKESGLGPDLCSYNTL 840
Query: 854 VEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDMRRMG 1030
++ +G A ++ ++ E G +P+ + +IN +N + + M++MG
Sbjct: 841 IKAYGIAGMVEDAVVLVKEMRENGIQPDRITYINLINALRKNDEFLEAVKWSLWMKQMG 899
>ref|XP_002528404.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532192|gb|EEF33997.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 955
Score = 693 bits (1789), Expect = 0.0
Identities = 345/546 (63%), Positives = 421/546 (77%), Gaps = 10/546 (1%)
Frame = +2
Query: 2 KKKTSFVYNYNNKGVIDDALESAVDNISMDS---------SVGHCNFILKQLE-CCNDDK 151
K+K F +NY G+ + + V+ +D S+ HCN ILK+LE C +DDK
Sbjct: 148 KRKVGFKFNYKRNGIEQEIEDLFVEGGELDVNYSVIHCNLSLEHCNLILKRLERCSSDDK 207
Query: 152 ALSFFEWMRINGKLKDNVVAYNVALKVLGRKEDWMAAEGLLQQVISDSGRRLSFQVFNTL 331
+L FFEWMR NGKL+ N+ AYNV L+VLGR+EDW AE ++ +V G L F+VFNTL
Sbjct: 208 SLRFFEWMRNNGKLEKNLNAYNVILRVLGRREDWGTAERMIGEVSDSFGSELDFRVFNTL 267
Query: 332 IYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSANVADAEFVFEKMRGFKL 511
IYAC R+G L KWFR+MLE GV+PN+ATFGML LYQK NV +AEFVF KMR F +
Sbjct: 268 IYACSRRGNMLLGGKWFRMMLELGVQPNIATFGMLMGLYQKGWNVEEAEFVFSKMRSFGI 327
Query: 512 QCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGV 691
CQSAYSAMITIYTRL LY K+EEIIG M ED+V N+ENWLV LNAYSQQG+L EAE V
Sbjct: 328 ICQSAYSAMITIYTRLSLYNKAEEIIGLMGEDKVAMNVENWLVLLNAYSQQGRLEEAEQV 387
Query: 692 LREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGWGR 871
L EM+EA SPNIVA+NTLITGYGK+SNM AAQ LF ++ N GLE DET+YRSM+EGWGR
Sbjct: 388 LVEMQEASFSPNIVAFNTLITGYGKLSNMAAAQRLFLDIQNAGLEPDETTYRSMIEGWGR 447
Query: 872 ANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDMRRMGCQYSSII 1051
NYKE +WYY +L G+ PNSSN +T+INLQ ++ DDEG I TL+DM ++GCQ+SSI+
Sbjct: 448 TGNYKEAEWYYKELKRLGYMPNSSNLYTLINLQAKHDDDEGAIGTLDDMLKIGCQHSSIL 507
Query: 1052 SSVVQAYEKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAYVKHQLVDDALQILKGKKW 1231
++++AYEK R+NKVPL+L+ SFY HVLV+QTSCSILVM YVK+ LVD+AL++L KKW
Sbjct: 508 GTLLKAYEKAGRINKVPLLLKDSFYQHVLVNQTSCSILVMTYVKNCLVDEALKVLGDKKW 567
Query: 1232 KDNIFEDNLYHLLICSCKESDHREDAVRIFTQMPTFEGNPNLHIACTMIDIYGFMGRFNE 1411
KD FEDNLYHLLICSCKE + E AVRI+TQMP E PNLHI+CT+IDIY +G F E
Sbjct: 568 KDQTFEDNLYHLLICSCKELGNLESAVRIYTQMPKSEDKPNLHISCTVIDIYSVLGCFAE 627
Query: 1412 AKDLYLKLKSSGIALDMVTYSVVVRMYVKSGSLKEASLVLYDMEKQKEIVPDVFLFRDML 1591
A+ LY +LK SGIALDMV +S+VVRMYVK+GSLK+A VL MEKQ+ I+PD++L+RDML
Sbjct: 628 AEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQENIIPDIYLYRDML 687
Query: 1592 RIYQQC 1609
RIYQQC
Sbjct: 688 RIYQQC 693
Score = 81.6 bits (200), Expect = 5e-13
Identities = 65/329 (19%), Positives = 143/329 (43%), Gaps = 1/329 (0%)
Frame = +2
Query: 536 MITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGVLREM-REA 712
+I IY+ LG + ++E++ ++ + ++ + + + Y + G L +A VL M ++
Sbjct: 615 VIDIYSVLGCFAEAEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQE 674
Query: 713 GTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGWGRANNYKET 892
P+I Y ++ Y + M + L+H + ++ D+ Y ++ RA E
Sbjct: 675 NIIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGEL 734
Query: 893 KWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDMRRMGCQYSSIISSVVQAY 1072
+ ++++ GF PN+ F ++++ + K R+ G ++V+ AY
Sbjct: 735 SRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGLVDVISYNTVIAAY 794
Query: 1073 EKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAYVKHQLVDDALQILKGKKWKDNIFED 1252
+ + +R + V + + ++ Y K ++ +L+ K +
Sbjct: 795 GHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQMECFRNVLQRMKQSSYTSDH 854
Query: 1253 NLYHLLICSCKESDHREDAVRIFTQMPTFEGNPNLHIACTMIDIYGFMGRFNEAKDLYLK 1432
Y+++I E ++ + T++ P+L T+I YG G +A DL +
Sbjct: 855 YTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAIDLVKE 914
Query: 1433 LKSSGIALDMVTYSVVVRMYVKSGSLKEA 1519
++ +GI D +TYS ++ K+ EA
Sbjct: 915 MRENGIEPDKITYSNLITALQKNDKYLEA 943
Score = 75.9 bits (185), Expect = 3e-11
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 36/231 (15%)
Frame = +2
Query: 314 QVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSA--NVADAEFVF 487
+++N +I C R ++ F ML+ G PN TF ++ +Y K+ N A F
Sbjct: 716 ELYNCIINCCARALPVGELSRLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWM 775
Query: 488 EKMRG-------------------FKLQCQS--------------AYSAMITIYTRLGLY 568
+ RG FK + AY+ M+ Y + G
Sbjct: 776 ARKRGLVDVISYNTVIAAYGHNKDFKNMASAVRNMQFDGFSVSLEAYNCMLDGYGKEGQM 835
Query: 569 GKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTL 748
++ M++ + + + +N Y +QG + E GVL E+RE G P++ +YNTL
Sbjct: 836 ECFRNVLQRMKQSSYTSDHYTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTL 895
Query: 749 ITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGWGRANNYKE-TKW 898
I YG ++ A L + G+E D+ +Y +++ + + Y E KW
Sbjct: 896 IKAYGVAGMVEDAIDLVKEMRENGIEPDKITYSNLITALQKNDKYLEAVKW 946
Score = 63.9 bits (154), Expect = 1e-07
Identities = 71/336 (21%), Positives = 149/336 (44%), Gaps = 8/336 (2%)
Frame = +2
Query: 332 IYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSANVADAEFVFEKMRGFK- 508
+ CF + A K ++ + +G+ ++ F ++ +Y K+ ++ DA V M +
Sbjct: 621 VLGCFAE-----AEKLYQQLKCSGIALDMVAFSIVVRMYVKAGSLKDACSVLATMEKQEN 675
Query: 509 -LQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAE 685
+ Y M+ IY + G+ K +++ + + V + E + +N ++ + E
Sbjct: 676 IIPDIYLYRDMLRIYQQCGMMSKLKDLYHKILKSEVDWDQELYNCIINCCARALPVGELS 735
Query: 686 GVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGW 865
+ EM + G SPN + +N ++ YGK + A+ LF GL D SY +++ +
Sbjct: 736 RLFSEMLQRGFSPNTITFNVMLDVYGKAKLFNKAKELFWMARKRGL-VDVISYNTVIAAY 794
Query: 866 GRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDM--RRMGCQY 1039
G ++K + GF + + N + EG + ++ R Y
Sbjct: 795 GHNKDFKNMASAVRNMQFDGFSVSLEAY----NCMLDGYGKEGQMECFRNVLQRMKQSSY 850
Query: 1040 SS---IISSVVQAYEKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAYVKHQLVDDALQ 1210
+S + ++ Y + +++V VL + D S + L+ AY +V+DA+
Sbjct: 851 TSDHYTYNIMINIYGEQGWIDEVAGVLTELRECGLRPDLCSYNTLIKAYGVAGMVEDAID 910
Query: 1211 ILKGKKWKDNIFEDNL-YHLLICSCKESDHREDAVR 1315
++K + ++ I D + Y LI + +++D +AV+
Sbjct: 911 LVKEMR-ENGIEPDKITYSNLITALQKNDKYLEAVK 945
>ref|XP_004146719.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30825,
chloroplastic-like [Cucumis sativus]
Length = 894
Score = 669 bits (1727), Expect = 0.0
Identities = 323/533 (60%), Positives = 412/533 (77%), Gaps = 1/533 (0%)
Frame = +2
Query: 14 SFVYNYNNKGVIDDA-LESAVDNISMDSSVGHCNFILKQLECCNDDKALSFFEWMRINGK 190
SF N N+ + + L+ IS D S+ CN ILK+LE CND K L FFEWMR NGK
Sbjct: 100 SFSRNCNDNILFNGGELDVNYSTISSDLSLEDCNAILKRLEKCNDSKTLGFFEWMRSNGK 159
Query: 191 LKDNVVAYNVALKVLGRKEDWMAAEGLLQQVISDSGRRLSFQVFNTLIYACFRKGYGDLA 370
LK NV AYN+ L+VLGR+EDW AAE L+++V ++ G +L FQVFNTLIYAC++ + +
Sbjct: 160 LKHNVSAYNLVLRVLGRQEDWDAAEKLIEEVRAELGSQLDFQVFNTLIYACYKSRFVEQG 219
Query: 371 TKWFRLMLENGVRPNVATFGMLTSLYQKSANVADAEFVFEKMRGFKLQCQSAYSAMITIY 550
TKWFR+MLE V+PNVATFGML LYQK ++ ++EF F +MR F + C++AY++MITIY
Sbjct: 220 TKWFRMMLECQVQPNVATFGMLMGLYQKKCDIKESEFAFNQMRNFGIVCETAYASMITIY 279
Query: 551 TRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGVLREMREAGTSPNI 730
R+ LY K+EE+I M+ED+V+PNLENW+V LNAY QQGK+ EAE V M EAG S NI
Sbjct: 280 IRMNLYDKAEEVIQLMQEDKVIPNLENWVVMLNAYCQQGKMEEAELVFASMEEAGFSSNI 339
Query: 731 VAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGWGRANNYKETKWYYDK 910
+AYNTLITGYGK SNMD AQ LF + N G+E DET+YRSM+EGWGRA NYK +WYY +
Sbjct: 340 IAYNTLITGYGKASNMDTAQRLFLGIKNSGVEPDETTYRSMIEGWGRAGNYKMAEWYYKE 399
Query: 911 LIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDMRRMGCQYSSIISSVVQAYEKVRRV 1090
L G+ PNSSN FT+INLQ +++D+ G + TLNDM ++GC+ SSI+ +V+QAYEK RR+
Sbjct: 400 LKRRGYMPNSSNLFTLINLQAKHEDEAGTLKTLNDMLKIGCRPSSIVGNVLQAYEKARRM 459
Query: 1091 NKVPLVLRGSFYSHVLVDQTSCSILVMAYVKHQLVDDALQILKGKKWKDNIFEDNLYHLL 1270
VP++L GSFY VL QTSCSILVMAYVKH LVDDAL++L+ K+WKD+ FE+NLYHLL
Sbjct: 460 KSVPVLLTGSFYRKVLSSQTSCSILVMAYVKHCLVDDALKVLREKEWKDHHFEENLYHLL 519
Query: 1271 ICSCKESDHREDAVRIFTQMPTFEGNPNLHIACTMIDIYGFMGRFNEAKDLYLKLKSSGI 1450
ICSCKE H E+A++I+TQ+P E PNLHI CTMIDIY MGRF++ + LYL L+SSGI
Sbjct: 520 ICSCKELGHLENAIKIYTQLPKRENKPNLHITCTMIDIYSIMGRFSDGEKLYLSLRSSGI 579
Query: 1451 ALDMVTYSVVVRMYVKSGSLKEASLVLYDMEKQKEIVPDVFLFRDMLRIYQQC 1609
LD++ Y+VVVRMYVK+GSL++A VL M +Q++IVPD++L RDMLRIYQ+C
Sbjct: 580 PLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQDIVPDIYLLRDMLRIYQRC 632
Score = 77.8 bits (190), Expect = 8e-12
Identities = 56/232 (24%), Positives = 104/232 (44%)
Frame = +2
Query: 284 ISDSGRRLSFQVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSAN 463
I SG +++N +I C R D ++ F ML+ G PN T ++ +Y KS
Sbjct: 645 ILKSGVSWDQEMYNCVINCCSRALPVDELSRLFDEMLQCGFAPNTVTLNVMLDVYGKSKL 704
Query: 464 VADAEFVFEKMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQ 643
A +F + L +Y+ MI++Y + + + M+ + +LE +
Sbjct: 705 FTKARNLFGLAQKRGLVDAISYNTMISVYGKNKDFKNMSSTVQKMKFNGFSVSLEAYNCM 764
Query: 644 LNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGL 823
L+AY ++ ++ VL+ M+E + + YN +I YG+ +D + L GL
Sbjct: 765 LDAYGKECQMENFRSVLQRMQETSSECDHYTYNIMINIYGEQGWIDEVAEVLTELKACGL 824
Query: 824 EADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRN 979
E D SY ++++ +G A +E ++ E +P+ + +I RN
Sbjct: 825 EPDLYSYNTLIKAYGIAGMVEEAAQLVKEMREKRIEPDRITYINMIRALQRN 876
Score = 76.3 bits (186), Expect = 2e-11
Identities = 62/329 (18%), Positives = 142/329 (43%), Gaps = 1/329 (0%)
Frame = +2
Query: 536 MITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQLNAYSQQGKLVEAEGVLREMREA- 712
MI IY+ +G + E++ +R + +L + V + Y + G L +A VL M E
Sbjct: 554 MIDIYSIMGRFSDGEKLYLSLRSSGIPLDLIAYNVVVRMYVKAGSLEDACSVLDLMAEQQ 613
Query: 713 GTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGLEADETSYRSMVEGWGRANNYKET 892
P+I ++ Y + + L++ + G+ D+ Y ++ RA E
Sbjct: 614 DIVPDIYLLRDMLRIYQRCGMVHKLADLYYRILKSGVSWDQEMYNCVINCCSRALPVDEL 673
Query: 893 KWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIATLNDMRRMGCQYSSIISSVVQAY 1072
+D++++ GF PN+ ++++ ++K ++ G + ++++ Y
Sbjct: 674 SRLFDEMLQCGFAPNTVTLNVMLDVYGKSKLFTKARNLFGLAQKRGLVDAISYNTMISVY 733
Query: 1073 EKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAYVKHQLVDDALQILKGKKWKDNIFED 1252
K + + ++ ++ V + + ++ AY K +++ +L+ + + +
Sbjct: 734 GKNKDFKNMSSTVQKMKFNGFSVSLEAYNCMLDAYGKECQMENFRSVLQRMQETSSECDH 793
Query: 1253 NLYHLLICSCKESDHREDAVRIFTQMPTFEGNPNLHIACTMIDIYGFMGRFNEAKDLYLK 1432
Y+++I E ++ + T++ P+L+ T+I YG G EA L +
Sbjct: 794 YTYNIMINIYGEQGWIDEVAEVLTELKACGLEPDLYSYNTLIKAYGIAGMVEEAAQLVKE 853
Query: 1433 LKSSGIALDMVTYSVVVRMYVKSGSLKEA 1519
++ I D +TY ++R ++ EA
Sbjct: 854 MREKRIEPDRITYINMIRALQRNDQFLEA 882
>ref|NP_567856.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635625|sp|O65567.2|PP342_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g30825, chloroplastic; Flags: Precursor
gi|332660415|gb|AEE85815.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 904
Score = 628 bits (1620), Expect = e-177
Identities = 309/510 (60%), Positives = 388/510 (76%)
Frame = +2
Query: 80 ISMDSSVGHCNFILKQLECCNDDKALSFFEWMRINGKLKDNVVAYNVALKVLGRKEDWMA 259
I S+ HCN ILK+LE C+D A+ FF+WMR NGKL N VAY++ L+VLGR+E+W
Sbjct: 133 IKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDR 192
Query: 260 AEGLLQQVISDSGRRLSFQVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLT 439
AE L++++ + S+QVFNT+IYAC +KG LA+KWF +MLE GVRPNVAT GML
Sbjct: 193 AEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM 252
Query: 440 SLYQKSANVADAEFVFEKMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVP 619
LYQK+ NV +AEF F MR F + C+SAYS+MITIYTRL LY K+EE+I M++DRV
Sbjct: 253 GLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRL 312
Query: 620 NLENWLVQLNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLF 799
LENWLV LNAYSQQGK+ AE +L M AG SPNI+AYNTLITGYGK+ M+AAQ LF
Sbjct: 313 KLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLF 372
Query: 800 HNLANVGLEADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRN 979
H L N+GLE DETSYRSM+EGWGRA+NY+E K YY +L G+KPNS N FT+INLQ +
Sbjct: 373 HRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKY 432
Query: 980 KDDEGVIATLNDMRRMGCQYSSIISSVVQAYEKVRRVNKVPLVLRGSFYSHVLVDQTSCS 1159
D +G I T+ DM +GCQYSSI+ ++QAYEKV +++ VP VL+GSF++H+ ++QTS S
Sbjct: 433 GDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFS 492
Query: 1160 ILVMAYVKHQLVDDALQILKGKKWKDNIFEDNLYHLLICSCKESDHREDAVRIFTQMPTF 1339
LVMAYVKH +VDD L +L+ KKW+D+ FE +LYHLLICSCKES DAV+I+
Sbjct: 493 SLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMES 552
Query: 1340 EGNPNLHIACTMIDIYGFMGRFNEAKDLYLKLKSSGIALDMVTYSVVVRMYVKSGSLKEA 1519
+ NLHI TMIDIY MG F+EA+ LYL LKSSG+ LD + +S+VVRMYVK+GSL+EA
Sbjct: 553 DEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEA 612
Query: 1520 SLVLYDMEKQKEIVPDVFLFRDMLRIYQQC 1609
VL M++QK+IVPDV+LFRDMLRIYQ+C
Sbjct: 613 CSVLEIMDEQKDIVPDVYLFRDMLRIYQKC 642
Score = 94.0 bits (232), Expect = 1e-16
Identities = 92/438 (21%), Positives = 189/438 (43%), Gaps = 8/438 (1%)
Frame = +2
Query: 302 RLSFQVFNTLIYACFRKGYGD------LATKWFRLMLENGVRPNVATFGMLTSLYQKSAN 463
RL+ F++L+ A + G D KW E+ + + +L ++S
Sbjct: 485 RLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL------YHLLICSCKESGQ 538
Query: 464 VADAEFVFE-KMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLV 640
+ DA ++ KM + S MI IYT +G + ++E++ ++ VV + + +
Sbjct: 539 LTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSI 598
Query: 641 QLNAYSQQGKLVEAEGVLREMREA-GTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANV 817
+ Y + G L EA VL M E P++ + ++ Y K D Q L++ +
Sbjct: 599 VVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKS 658
Query: 818 GLEADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGV 997
G+ ++ Y ++ RA E ++++I GF PN+ F ++++ + K
Sbjct: 659 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK----- 713
Query: 998 IATLNDMRRMGCQYSSIISSVVQAYEKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAY 1177
++VN++ L+ + H +VD S + ++ AY
Sbjct: 714 --------------------------LFKKVNELFLLAK----RHGVVDVISYNTIIAAY 743
Query: 1178 VKHQLVDDALQILKGKKWKDNIFEDNLYHLLICSCKESDHREDAVRIFTQMPTFEGNPNL 1357
K++ + +K ++ Y+ L+ + + E I +M P+
Sbjct: 744 GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDH 803
Query: 1358 HIACTMIDIYGFMGRFNEAKDLYLKLKSSGIALDMVTYSVVVRMYVKSGSLKEASLVLYD 1537
+ MI+IYG G +E D+ +LK SG+ D+ +Y+ +++ Y G ++EA ++ +
Sbjct: 804 YTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKE 863
Query: 1538 MEKQKEIVPDVFLFRDML 1591
M + + I+PD + +++
Sbjct: 864 M-RGRNIIPDKVTYTNLV 880
Score = 71.2 bits (173), Expect = 7e-10
Identities = 55/249 (22%), Positives = 106/249 (42%)
Frame = +2
Query: 284 ISDSGRRLSFQVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSAN 463
I SG + +++N +I C R D + F M+ G PN TF +L +Y K+
Sbjct: 655 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 714
Query: 464 VADAEFVFEKMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQ 643
+F + + +Y+ +I Y + Y I M+ D +LE +
Sbjct: 715 FKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 774
Query: 644 LNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGL 823
L+AY + ++ + +L+ M+++ + P+ YN +I YG+ +D + L GL
Sbjct: 775 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 834
Query: 824 EADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIA 1003
D SY ++++ +G +E ++ P+ + ++ RN + I
Sbjct: 835 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 894
Query: 1004 TLNDMRRMG 1030
M++MG
Sbjct: 895 WSLWMKQMG 903
>emb|CAA18211.1| puative protein [Arabidopsis thaliana] gi|7269983|emb|CAB79800.1|
puative protein [Arabidopsis thaliana]
Length = 1075
Score = 628 bits (1620), Expect = e-177
Identities = 309/510 (60%), Positives = 388/510 (76%)
Frame = +2
Query: 80 ISMDSSVGHCNFILKQLECCNDDKALSFFEWMRINGKLKDNVVAYNVALKVLGRKEDWMA 259
I S+ HCN ILK+LE C+D A+ FF+WMR NGKL N VAY++ L+VLGR+E+W
Sbjct: 304 IKPGQSLEHCNGILKRLESCSDTNAIKFFDWMRCNGKLVGNFVAYSLILRVLGRREEWDR 363
Query: 260 AEGLLQQVISDSGRRLSFQVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLT 439
AE L++++ + S+QVFNT+IYAC +KG LA+KWF +MLE GVRPNVAT GML
Sbjct: 364 AEDLIKELCGFHEFQKSYQVFNTVIYACTKKGNVKLASKWFHMMLEFGVRPNVATIGMLM 423
Query: 440 SLYQKSANVADAEFVFEKMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVP 619
LYQK+ NV +AEF F MR F + C+SAYS+MITIYTRL LY K+EE+I M++DRV
Sbjct: 424 GLYQKNWNVEEAEFAFSHMRKFGIVCESAYSSMITIYTRLRLYDKAEEVIDLMKQDRVRL 483
Query: 620 NLENWLVQLNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLF 799
LENWLV LNAYSQQGK+ AE +L M AG SPNI+AYNTLITGYGK+ M+AAQ LF
Sbjct: 484 KLENWLVMLNAYSQQGKMELAESILVSMEAAGFSPNIIAYNTLITGYGKIFKMEAAQGLF 543
Query: 800 HNLANVGLEADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRN 979
H L N+GLE DETSYRSM+EGWGRA+NY+E K YY +L G+KPNS N FT+INLQ +
Sbjct: 544 HRLCNIGLEPDETSYRSMIEGWGRADNYEEAKHYYQELKRCGYKPNSFNLFTLINLQAKY 603
Query: 980 KDDEGVIATLNDMRRMGCQYSSIISSVVQAYEKVRRVNKVPLVLRGSFYSHVLVDQTSCS 1159
D +G I T+ DM +GCQYSSI+ ++QAYEKV +++ VP VL+GSF++H+ ++QTS S
Sbjct: 604 GDRDGAIKTIEDMTGIGCQYSSILGIILQAYEKVGKIDVVPCVLKGSFHNHIRLNQTSFS 663
Query: 1160 ILVMAYVKHQLVDDALQILKGKKWKDNIFEDNLYHLLICSCKESDHREDAVRIFTQMPTF 1339
LVMAYVKH +VDD L +L+ KKW+D+ FE +LYHLLICSCKES DAV+I+
Sbjct: 664 SLVMAYVKHGMVDDCLGLLREKKWRDSAFESHLYHLLICSCKESGQLTDAVKIYNHKMES 723
Query: 1340 EGNPNLHIACTMIDIYGFMGRFNEAKDLYLKLKSSGIALDMVTYSVVVRMYVKSGSLKEA 1519
+ NLHI TMIDIY MG F+EA+ LYL LKSSG+ LD + +S+VVRMYVK+GSL+EA
Sbjct: 724 DEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSIVVRMYVKAGSLEEA 783
Query: 1520 SLVLYDMEKQKEIVPDVFLFRDMLRIYQQC 1609
VL M++QK+IVPDV+LFRDMLRIYQ+C
Sbjct: 784 CSVLEIMDEQKDIVPDVYLFRDMLRIYQKC 813
Score = 94.0 bits (232), Expect = 1e-16
Identities = 92/438 (21%), Positives = 189/438 (43%), Gaps = 8/438 (1%)
Frame = +2
Query: 302 RLSFQVFNTLIYACFRKGYGD------LATKWFRLMLENGVRPNVATFGMLTSLYQKSAN 463
RL+ F++L+ A + G D KW E+ + + +L ++S
Sbjct: 656 RLNQTSFSSLVMAYVKHGMVDDCLGLLREKKWRDSAFESHL------YHLLICSCKESGQ 709
Query: 464 VADAEFVFE-KMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLV 640
+ DA ++ KM + S MI IYT +G + ++E++ ++ VV + + +
Sbjct: 710 LTDAVKIYNHKMESDEEINLHITSTMIDIYTVMGEFSEAEKLYLNLKSSGVVLDRIGFSI 769
Query: 641 QLNAYSQQGKLVEAEGVLREMREA-GTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANV 817
+ Y + G L EA VL M E P++ + ++ Y K D Q L++ +
Sbjct: 770 VVRMYVKAGSLEEACSVLEIMDEQKDIVPDVYLFRDMLRIYQKCDLQDKLQHLYYRIRKS 829
Query: 818 GLEADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGV 997
G+ ++ Y ++ RA E ++++I GF PN+ F ++++ + K
Sbjct: 830 GIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAK----- 884
Query: 998 IATLNDMRRMGCQYSSIISSVVQAYEKVRRVNKVPLVLRGSFYSHVLVDQTSCSILVMAY 1177
++VN++ L+ + H +VD S + ++ AY
Sbjct: 885 --------------------------LFKKVNELFLLAK----RHGVVDVISYNTIIAAY 914
Query: 1178 VKHQLVDDALQILKGKKWKDNIFEDNLYHLLICSCKESDHREDAVRIFTQMPTFEGNPNL 1357
K++ + +K ++ Y+ L+ + + E I +M P+
Sbjct: 915 GKNKDYTNMSSAIKNMQFDGFSVSLEAYNTLLDAYGKDKQMEKFRSILKRMKKSTSGPDH 974
Query: 1358 HIACTMIDIYGFMGRFNEAKDLYLKLKSSGIALDMVTYSVVVRMYVKSGSLKEASLVLYD 1537
+ MI+IYG G +E D+ +LK SG+ D+ +Y+ +++ Y G ++EA ++ +
Sbjct: 975 YTYNIMINIYGEQGWIDEVADVLKELKESGLGPDLCSYNTLIKAYGIGGMVEEAVGLVKE 1034
Query: 1538 MEKQKEIVPDVFLFRDML 1591
M + + I+PD + +++
Sbjct: 1035 M-RGRNIIPDKVTYTNLV 1051
Score = 71.2 bits (173), Expect = 7e-10
Identities = 55/249 (22%), Positives = 106/249 (42%)
Frame = +2
Query: 284 ISDSGRRLSFQVFNTLIYACFRKGYGDLATKWFRLMLENGVRPNVATFGMLTSLYQKSAN 463
I SG + +++N +I C R D + F M+ G PN TF +L +Y K+
Sbjct: 826 IRKSGIHWNQEMYNCVINCCARALPLDELSGTFEEMIRYGFTPNTVTFNVLLDVYGKAKL 885
Query: 464 VADAEFVFEKMRGFKLQCQSAYSAMITIYTRLGLYGKSEEIIGFMREDRVVPNLENWLVQ 643
+F + + +Y+ +I Y + Y I M+ D +LE +
Sbjct: 886 FKKVNELFLLAKRHGVVDVISYNTIIAAYGKNKDYTNMSSAIKNMQFDGFSVSLEAYNTL 945
Query: 644 LNAYSQQGKLVEAEGVLREMREAGTSPNIVAYNTLITGYGKVSNMDAAQLLFHNLANVGL 823
L+AY + ++ + +L+ M+++ + P+ YN +I YG+ +D + L GL
Sbjct: 946 LDAYGKDKQMEKFRSILKRMKKSTSGPDHYTYNIMINIYGEQGWIDEVADVLKELKESGL 1005
Query: 824 EADETSYRSMVEGWGRANNYKETKWYYDKLIEAGFKPNSSNFFTIINLQVRNKDDEGVIA 1003
D SY ++++ +G +E ++ P+ + ++ RN + I
Sbjct: 1006 GPDLCSYNTLIKAYGIGGMVEEAVGLVKEMRGRNIIPDKVTYTNLVTALRRNDEFLEAIK 1065
Query: 1004 TLNDMRRMG 1030
M++MG
Sbjct: 1066 WSLWMKQMG 1074