BLASTX nr result

ID: Papaver23_contig00014956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00014956
         (802 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vi...    57   2e-10
emb|CBI34367.3| unnamed protein product [Vitis vinifera]               57   2e-07
tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...    55   2e-07
tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea m...    55   2e-07
ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Br...    54   3e-07

>ref|XP_002273444.1| PREDICTED: DNA repair helicase XPB1-like [Vitis vinifera]
          Length = 771

 Score = 57.0 bits (136), Expect(2) = 2e-10
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -1

Query: 316 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 221
           MIDFI+AST+NYGK+KLVLK N YFVESPFP+
Sbjct: 143 MIDFIHASTANYGKVKLVLKKNRYFVESPFPE 174



 Score = 34.3 bits (77), Expect(2) = 2e-10
 Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = -2

Query: 108 KTLLHDEVKSGARLSSE--LGTDSFRINNKAIGEVEG 4
           KTLL DEV S +R+S E   G D F I +K +GE+EG
Sbjct: 177 KTLLRDEVISRSRISHEGSTGNDGFTI-SKTVGEIEG 212


>emb|CBI34367.3| unnamed protein product [Vitis vinifera]
          Length = 850

 Score = 57.0 bits (136), Expect(2) = 2e-07
 Identities = 26/32 (81%), Positives = 30/32 (93%)
 Frame = -1

Query: 316 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 221
           MIDFI+AST+NYGK+KLVLK N YFVESPFP+
Sbjct: 143 MIDFIHASTANYGKVKLVLKKNRYFVESPFPE 174



 Score = 24.3 bits (51), Expect(2) = 2e-07
 Identities = 12/19 (63%), Positives = 14/19 (73%)
 Frame = -2

Query: 108 KTLLHDEVKSGARLSSELG 52
           KTLL DEV S +R+S E G
Sbjct: 177 KTLLRDEVISRSRISHEHG 195


>tpg|DAA58033.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 767

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -1

Query: 316 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQESALLYKIYFVS 185
           +IDFI+ ST+NYGK+KLVLK N YFVESPFP+  + L +   +S
Sbjct: 144 IIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSTLLRDEVIS 187



 Score = 26.6 bits (57), Expect(2) = 2e-07
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -2

Query: 105 TLLHDEVKSGARLSSE--LGTDSFRINNKAIGEV 10
           TLL DEV S AR+S E  LG  SF + +K  G++
Sbjct: 179 TLLRDEVISRARISPEDSLGAPSFTV-SKTSGQI 211


>tpg|DAA58032.1| TPA: hypothetical protein ZEAMMB73_851798 [Zea mays]
          Length = 702

 Score = 54.7 bits (130), Expect(2) = 2e-07
 Identities = 26/44 (59%), Positives = 34/44 (77%)
 Frame = -1

Query: 316 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQESALLYKIYFVS 185
           +IDFI+ ST+NYGK+KLVLK N YFVESPFP+  + L +   +S
Sbjct: 144 IIDFIHGSTANYGKVKLVLKKNRYFVESPFPEVLSTLLRDEVIS 187



 Score = 26.6 bits (57), Expect(2) = 2e-07
 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -2

Query: 105 TLLHDEVKSGARLSSE--LGTDSFRINNKAIGEV 10
           TLL DEV S AR+S E  LG  SF + +K  G++
Sbjct: 179 TLLRDEVISRARISPEDSLGAPSFTV-SKTSGQI 211


>ref|XP_003569596.1| PREDICTED: DNA repair helicase XPB2-like [Brachypodium distachyon]
          Length = 766

 Score = 53.9 bits (128), Expect(2) = 3e-07
 Identities = 24/32 (75%), Positives = 29/32 (90%)
 Frame = -1

Query: 316 MIDFIYASTSNYGKLKLVLKINWYFVESPFPQ 221
           +IDFI+ ST+NYGK+KLVLK N YFVESPFP+
Sbjct: 144 IIDFIHGSTANYGKVKLVLKKNRYFVESPFPE 175



 Score = 26.9 bits (58), Expect(2) = 3e-07
 Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 2/35 (5%)
 Frame = -2

Query: 108 KTLLHDEVKSGARLSSE--LGTDSFRINNKAIGEV 10
           KTLL+DEV + AR S E  LG  SF + +K  GE+
Sbjct: 178 KTLLNDEVIARARQSPEDSLGGPSFTV-SKTAGEI 211


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