BLASTX nr result

ID: Papaver23_contig00014361 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00014361
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523404.1| rubisco subunit binding-protein beta subunit...    63   3e-09
gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| pu...    61   4e-09
gb|ACN28096.1| unknown [Zea mays] gi|223948483|gb|ACN28325.1| un...    61   4e-09
gb|AFW86142.1| putative TCP-1/cpn60 chaperonin family protein [Z...    61   4e-09
ref|XP_002437709.1| hypothetical protein SORBIDRAFT_10g001120 [S...    60   7e-09

>ref|XP_002523404.1| rubisco subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis] gi|223537354|gb|EEF38983.1| rubisco
           subunit binding-protein beta subunit, rubb, putative
           [Ricinus communis]
          Length = 605

 Score = 62.8 bits (151), Expect(2) = 3e-09
 Identities = 36/57 (63%), Positives = 42/57 (73%), Gaps = 6/57 (10%)
 Frame = +3

Query: 255 NYE--KIIAKAMSRGGMKGVVIFEEAKSSENSLW----MQFDCG*ISPYFVTDGEEL 407
           NYE   +IA+AMSR G KGVV  EE KS+ENSL+    MQFD G ISPYFVTD E++
Sbjct: 214 NYEVGNMIAEAMSRVGRKGVVTLEEGKSAENSLYVVEGMQFDRGYISPYFVTDSEKM 270



 Score = 25.4 bits (54), Expect(2) = 3e-09
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = +2

Query: 203 EESELADVAAVSA 241
           E+SELADVAAVSA
Sbjct: 199 EDSELADVAAVSA 211


>gb|ACN34709.1| unknown [Zea mays] gi|413953489|gb|AFW86138.1| putative TCP-1/cpn60
           chaperonin family protein [Zea mays]
          Length = 600

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = +3

Query: 255 NYE--KIIAKAMSRGGMKGVVIFEEAKSSENSLW----MQFDCG*ISPYFVTDGEELRSA 416
           NYE   +IA+AMS+ G KGVV  EE KSSEN L+    MQFD G ISPYFVTD E++ + 
Sbjct: 209 NYEIGNMIAEAMSKVGRKGVVTLEEGKSSENFLYVVEGMQFDRGYISPYFVTDSEKMTAE 268

Query: 417 ETN 425
             N
Sbjct: 269 YEN 271



 Score = 26.6 bits (57), Expect(2) = 4e-09
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +2

Query: 173 LFKNLHKLKDE--ESELADVAAVSA 241
           L + L KL  E  +SELADVAAVSA
Sbjct: 182 LVEELRKLSKEVEDSELADVAAVSA 206


>gb|ACN28096.1| unknown [Zea mays] gi|223948483|gb|ACN28325.1| unknown [Zea mays]
           gi|413953490|gb|AFW86139.1| putative TCP-1/cpn60
           chaperonin family protein isoform 1 [Zea mays]
           gi|413953491|gb|AFW86140.1| putative TCP-1/cpn60
           chaperonin family protein isoform 2 [Zea mays]
           gi|413953492|gb|AFW86141.1| putative TCP-1/cpn60
           chaperonin family protein isoform 3 [Zea mays]
          Length = 579

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = +3

Query: 255 NYE--KIIAKAMSRGGMKGVVIFEEAKSSENSLW----MQFDCG*ISPYFVTDGEELRSA 416
           NYE   +IA+AMS+ G KGVV  EE KSSEN L+    MQFD G ISPYFVTD E++ + 
Sbjct: 188 NYEIGNMIAEAMSKVGRKGVVTLEEGKSSENFLYVVEGMQFDRGYISPYFVTDSEKMTAE 247

Query: 417 ETN 425
             N
Sbjct: 248 YEN 250



 Score = 26.6 bits (57), Expect(2) = 4e-09
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +2

Query: 173 LFKNLHKLKDE--ESELADVAAVSA 241
           L + L KL  E  +SELADVAAVSA
Sbjct: 161 LVEELRKLSKEVEDSELADVAAVSA 185


>gb|AFW86142.1| putative TCP-1/cpn60 chaperonin family protein [Zea mays]
          Length = 388

 Score = 61.2 bits (147), Expect(2) = 4e-09
 Identities = 36/63 (57%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = +3

Query: 255 NYE--KIIAKAMSRGGMKGVVIFEEAKSSENSLW----MQFDCG*ISPYFVTDGEELRSA 416
           NYE   +IA+AMS+ G KGVV  EE KSSEN L+    MQFD G ISPYFVTD E++ + 
Sbjct: 188 NYEIGNMIAEAMSKVGRKGVVTLEEGKSSENFLYVVEGMQFDRGYISPYFVTDSEKMTAE 247

Query: 417 ETN 425
             N
Sbjct: 248 YEN 250



 Score = 26.6 bits (57), Expect(2) = 4e-09
 Identities = 16/25 (64%), Positives = 18/25 (72%), Gaps = 2/25 (8%)
 Frame = +2

Query: 173 LFKNLHKLKDE--ESELADVAAVSA 241
           L + L KL  E  +SELADVAAVSA
Sbjct: 161 LVEELRKLSKEVEDSELADVAAVSA 185


>ref|XP_002437709.1| hypothetical protein SORBIDRAFT_10g001120 [Sorghum bicolor]
           gi|241915932|gb|EER89076.1| hypothetical protein
           SORBIDRAFT_10g001120 [Sorghum bicolor]
          Length = 579

 Score = 60.1 bits (144), Expect(2) = 7e-09
 Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = +3

Query: 255 NYE--KIIAKAMSRGGMKGVVIFEEAKSSENSLW----MQFDCG*ISPYFVTDGEELRSA 416
           NYE   +IA+AMS+ G KGVV  EE +SSEN L+    MQFD G ISPYFVTD E++ + 
Sbjct: 188 NYEIGNMIAEAMSKVGRKGVVTLEEGRSSENFLYVVEGMQFDRGYISPYFVTDSEKMSAE 247

Query: 417 ETN 425
             N
Sbjct: 248 YEN 250



 Score = 26.9 bits (58), Expect(2) = 7e-09
 Identities = 18/25 (72%), Positives = 20/25 (80%), Gaps = 2/25 (8%)
 Frame = +2

Query: 173 LFKNLHKL-KD-EESELADVAAVSA 241
           L + L KL KD E+SELADVAAVSA
Sbjct: 161 LVEELRKLSKDVEDSELADVAAVSA 185


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