BLASTX nr result
ID: Papaver23_contig00014353
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00014353
(420 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen... 239 1e-61
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like... 235 3e-60
gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo] 235 3e-60
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like... 234 4e-60
emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera] 234 4e-60
>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
Length = 1023
Score = 239 bits (611), Expect = 1e-61
Identities = 117/139 (84%), Positives = 128/139 (92%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGK+ AR+LI+KGCEECPK+EDVW EAC
Sbjct: 365 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKIAAARQLIKKGCEECPKNEDVWLEAC 424
Query: 182 RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQNVENKCRVFRKGLEHIPNSVRLWKAV 361
RLSSPDEAK V+A+GVK IPNSVKLWM AA+LE + NK RV RKGLEHIP+SVRLWKAV
Sbjct: 425 RLSSPDEAKAVIAKGVKAIPNSVKLWMQAAKLEHDDANKSRVLRKGLEHIPDSVRLWKAV 484
Query: 362 VELSDEEDARLLLQRAVEC 418
VEL++EEDARLLLQRAVEC
Sbjct: 485 VELANEEDARLLLQRAVEC 503
Score = 61.6 bits (148), Expect = 6e-08
Identities = 36/133 (27%), Positives = 68/133 (51%), Gaps = 7/133 (5%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
+ AR +L+ P W+AA +LE + + AR L+ K E +E VW ++
Sbjct: 698 VPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARER-GGTERVWMKSA 756
Query: 182 ----RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQ---NVENKCRVFRKGLEHIPNS 340
L + +E + ++ G+K+ P+ KLW++ +LE+ N+E + GL+H P+
Sbjct: 757 IVERELGNTNEERRLLDEGLKLFPSFFKLWLMLGQLEERLGNLEQAKEAYESGLKHCPSC 816
Query: 341 VRLWKAVVELSDE 379
+ LW ++ L ++
Sbjct: 817 IPLWLSLANLEEK 829
>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
gi|449514699|ref|XP_004164455.1| PREDICTED:
pre-mRNA-processing factor 6-like [Cucumis sativus]
Length = 1023
Score = 235 bits (599), Expect = 3e-60
Identities = 113/139 (81%), Positives = 126/139 (90%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
IKKARLLLKSV QTNPKHPPGWIAAARLEEVAGK+Q AR+LI+KGCEECPK+EDVW EAC
Sbjct: 365 IKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIQKGCEECPKNEDVWLEAC 424
Query: 182 RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQNVENKCRVFRKGLEHIPNSVRLWKAV 361
RL+SPDEAK V+A+G K IPNSVKLW+ AA+LE + NK RV RKGLEHIP+SVRLWKAV
Sbjct: 425 RLASPDEAKAVIAKGAKSIPNSVKLWLQAAKLEHDTANKSRVLRKGLEHIPDSVRLWKAV 484
Query: 362 VELSDEEDARLLLQRAVEC 418
VEL++EEDARLLL RAVEC
Sbjct: 485 VELANEEDARLLLHRAVEC 503
Score = 58.2 bits (139), Expect = 7e-07
Identities = 35/133 (26%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
+ AR +L+ P W+AA +LE + + AR L+ K E +E VW ++
Sbjct: 698 VPAARSILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARER-GGTERVWMKSA 756
Query: 182 ----RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQ---NVENKCRVFRKGLEHIPNS 340
L + +E ++ G+K P+ KLW++ +LE+ ++E + GL+H P+
Sbjct: 757 IVERELGNAEEESKLLIEGLKRFPSFFKLWLMLGQLEERLKHLEKAKEAYESGLKHCPSC 816
Query: 341 VRLWKAVVELSDE 379
+ LW ++ L ++
Sbjct: 817 IPLWLSLAHLEEK 829
>gb|ADN34237.1| pre-mRNA splicing factor [Cucumis melo subsp. melo]
Length = 727
Score = 235 bits (599), Expect = 3e-60
Identities = 113/139 (81%), Positives = 126/139 (90%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
IKKARLLLKSV QTNPKHPPGWIAAARLEEVAGK+Q AR+LI+KGCEECPK+EDVW EAC
Sbjct: 69 IKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIQKGCEECPKNEDVWLEAC 128
Query: 182 RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQNVENKCRVFRKGLEHIPNSVRLWKAV 361
RL+SPDEAK V+A+G K IPNSVKLW+ AA+LE + NK RV RKGLEHIP+SVRLWKAV
Sbjct: 129 RLASPDEAKAVIAKGAKSIPNSVKLWLQAAKLEHDTANKSRVLRKGLEHIPDSVRLWKAV 188
Query: 362 VELSDEEDARLLLQRAVEC 418
VEL++EEDARLLL RAVEC
Sbjct: 189 VELANEEDARLLLHRAVEC 207
Score = 58.9 bits (141), Expect = 4e-07
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 7/133 (5%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
+ AR +L+ P W+AA +LE + + AR L+ K E +E VW ++
Sbjct: 402 VPAARSILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARER-GGTERVWMKSA 460
Query: 182 ----RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQ---NVENKCRVFRKGLEHIPNS 340
L + +E +++ G+K P+ KLW++ +LE+ ++E + GL+H P+
Sbjct: 461 IVERELGNAEEESKLLSEGLKRFPSFFKLWLMLGQLEERLKHLEKAKEAYESGLKHCPSC 520
Query: 341 VRLWKAVVELSDE 379
+ LW ++ L ++
Sbjct: 521 IPLWLSLAHLEEK 533
>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
Length = 1023
Score = 234 bits (598), Expect = 4e-60
Identities = 115/139 (82%), Positives = 126/139 (90%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
IKKARLLLKSV QTNPKHPPGWIAAARLEEVAGK+Q AR+LI KGCEECPK+EDVW EAC
Sbjct: 365 IKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIHKGCEECPKNEDVWLEAC 424
Query: 182 RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQNVENKCRVFRKGLEHIPNSVRLWKAV 361
RL+SPDEAK V+A+GVK I NSVKLWM AA+LE + NK RV RKGLEHIP+SVRLWKAV
Sbjct: 425 RLASPDEAKAVIAKGVKAISNSVKLWMQAAKLEHDDVNKSRVLRKGLEHIPDSVRLWKAV 484
Query: 362 VELSDEEDARLLLQRAVEC 418
VEL++EEDARLLLQRAVEC
Sbjct: 485 VELANEEDARLLLQRAVEC 503
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
+ AR +L+ P W+AA +LE + + AR L+ K E +E VW ++
Sbjct: 698 VPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARER-GGTERVWMKSA 756
Query: 182 ----RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQ---NVENKCRVFRKGLEHIPNS 340
L + E + ++ G+K+ P+ KLW++ +LE+ N E + GL+H P+
Sbjct: 757 IVERELGNTGEERRLLGEGLKLFPSFFKLWLMLGQLEERFGNFEKAKEAYDSGLKHCPSC 816
Query: 341 VRLWKAVVELSDE 379
+ LW ++ L ++
Sbjct: 817 IPLWLSLSHLEEK 829
>emb|CAN65423.1| hypothetical protein VITISV_024588 [Vitis vinifera]
Length = 1023
Score = 234 bits (598), Expect = 4e-60
Identities = 115/139 (82%), Positives = 126/139 (90%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
IKKARLLLKSV QTNPKHPPGWIAAARLEEVAGK+Q AR+LI KGCEECPK+EDVW EAC
Sbjct: 365 IKKARLLLKSVTQTNPKHPPGWIAAARLEEVAGKIQAARQLIHKGCEECPKNEDVWLEAC 424
Query: 182 RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQNVENKCRVFRKGLEHIPNSVRLWKAV 361
RL+SPDEAK V+A+GVK I NSVKLWM AA+LE + NK RV RKGLEHIP+SVRLWKAV
Sbjct: 425 RLASPDEAKAVIAKGVKAISNSVKLWMQAAKLEHDDVNKSRVLRKGLEHIPDSVRLWKAV 484
Query: 362 VELSDEEDARLLLQRAVEC 418
VEL++EEDARLLLQRAVEC
Sbjct: 485 VELANEEDARLLLQRAVEC 503
Score = 59.3 bits (142), Expect = 3e-07
Identities = 36/133 (27%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Frame = +2
Query: 2 IKKARLLLKSVIQTNPKHPPGWIAAARLEEVAGKVQDARKLIRKGCEECPKSEDVWSEAC 181
+ AR +L+ P W+AA +LE + + AR L+ K E +E VW ++
Sbjct: 698 VPAARAILQEAYAAIPNSEEIWLAAFKLEFENHEPERARMLLAKARER-GGTERVWMKSA 756
Query: 182 ----RLSSPDEAKGVVARGVKMIPNSVKLWMLAARLEQ---NVENKCRVFRKGLEHIPNS 340
L + E + ++ G+K+ P+ KLW++ +LE+ N E + GL+H P+
Sbjct: 757 IVERELGNTGEERRLLGEGLKLFPSFFKLWLMLGQLEERFGNFEKAKEAYDSGLKHCPSC 816
Query: 341 VRLWKAVVELSDE 379
+ LW ++ L ++
Sbjct: 817 IPLWLSLSHLEEK 829