BLASTX nr result

ID: Papaver23_contig00014200 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00014200
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTP...    45   1e-07
emb|CBI31619.3| unnamed protein product [Vitis vinifera]               45   1e-07
ref|XP_002311187.1| predicted protein [Populus trichocarpa] gi|2...    45   1e-07
ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putati...    44   5e-07
ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein lig...    42   8e-07

>ref|XP_002282470.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Vitis
           vinifera]
          Length = 484

 Score = 45.1 bits (105), Expect(2) = 1e-07
 Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 324 GFIPAAFHLPNEVSFFRATAGWAQC-HVSVNAEVY--GWKEWVP 446
           G  P  F LP E S  +A AGWA C  V+ N EVY  GWKE VP
Sbjct: 93  GETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVP 136



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 250 ESGKLITKGPSDGMGHSCVSYGKHGDS 330
           ESGKLIT G +D +G S V+ GKHG++
Sbjct: 69  ESGKLITWGSTDDLGQSYVTSGKHGET 95


>emb|CBI31619.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score = 45.1 bits (105), Expect(2) = 1e-07
 Identities = 24/44 (54%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 324 GFIPAAFHLPNEVSFFRATAGWAQC-HVSVNAEVY--GWKEWVP 446
           G  P  F LP E S  +A AGWA C  V+ N EVY  GWKE VP
Sbjct: 70  GETPEPFPLPTEASIVKAAAGWAHCASVTENGEVYTWGWKECVP 113



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 250 ESGKLITKGPSDGMGHSCVSYGKHGDS 330
           ESGKLIT G +D +G S V+ GKHG++
Sbjct: 46  ESGKLITWGSTDDLGQSYVTSGKHGET 72


>ref|XP_002311187.1| predicted protein [Populus trichocarpa] gi|222851007|gb|EEE88554.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 45.1 bits (105), Expect(2) = 1e-07
 Identities = 23/44 (52%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 324 GFIPAAFHLPNEVSFFRATAGWAQCHVSV-NAEVY--GWKEWVP 446
           G  P AF LP E S  +A AGWA C  +  N EVY  GWKE +P
Sbjct: 90  GETPEAFPLPTEASIVKAAAGWAHCVAATGNGEVYTWGWKECIP 133



 Score = 36.2 bits (82), Expect(2) = 1e-07
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 250 ESGKLITKGPSDGMGHSCVSYGKHGDS 330
           ESGKLIT G +D +G S V+ GKHG++
Sbjct: 66  ESGKLITWGSTDDLGQSYVTSGKHGET 92


>ref|XP_002524221.1| Serine/threonine-protein kinase Nek8, putative [Ricinus communis]
           gi|223536498|gb|EEF38145.1| Serine/threonine-protein
           kinase Nek8, putative [Ricinus communis]
          Length = 476

 Score = 43.5 bits (101), Expect(2) = 5e-07
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 324 GFIPAAFHLPNEVSFFRATAGWAQCHVSVN-AEVY--GWKEWVP 446
           G IP  F LP E S  +A AGWA C  + +  EVY  GWKE +P
Sbjct: 89  GEIPEPFPLPTEASIMKAAAGWAHCIAATDTGEVYTWGWKECIP 132



 Score = 35.8 bits (81), Expect(2) = 5e-07
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +1

Query: 250 ESGKLITKGPSDGMGHSCVSYGKHGD 327
           ESGKLIT G +D +G S V+ GKHG+
Sbjct: 65  ESGKLITWGSTDDLGQSYVTSGKHGE 90


>ref|XP_003519358.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 477

 Score = 42.4 bits (98), Expect(2) = 8e-07
 Identities = 22/44 (50%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
 Frame = +3

Query: 324 GFIPAAFHLPNEVSFFRATAGWAQC-HVSVNAEVY--GWKEWVP 446
           G  P  F LP E S  +A AGWA C  V+ + EVY  GWKE +P
Sbjct: 89  GETPEPFPLPTETSIVKAAAGWAHCVAVTEHGEVYTWGWKECIP 132



 Score = 36.2 bits (82), Expect(2) = 8e-07
 Identities = 16/27 (59%), Positives = 21/27 (77%)
 Frame = +1

Query: 250 ESGKLITKGPSDGMGHSCVSYGKHGDS 330
           ESGKLIT G +D +G S V+ GKHG++
Sbjct: 65  ESGKLITWGSTDDLGQSYVTSGKHGET 91


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