BLASTX nr result

ID: Papaver23_contig00014182 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00014182
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29961.3| unnamed protein product [Vitis vinifera]              388   e-106
ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation...   388   e-106
ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [...   384   e-105
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab...   383   e-104
gb|AAC83464.1| eIF3c [Arabidopsis thaliana]                           380   e-103

>emb|CBI29961.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  388 bits (997), Expect = e-106
 Identities = 190/232 (81%), Positives = 209/232 (90%)
 Frame = -2

Query: 698  DLLLMSHLQDGIQHMDILTQMLFNRTMAQLGLCAFRAGLIMEAHNCLSELYAGGRVRELI 519
            DLLLMSHLQD +QHMDI TQ+LFNR MAQLGLCAFR GLI E H CLSELY+GGRV+EL+
Sbjct: 459  DLLLMSHLQDNVQHMDISTQILFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKELL 518

Query: 518  AQGVSQSRYHEKTAEQEKLERRRQVPYHMHINLELLESVHLICAMLLEVPNMAANSHDAR 339
            AQGVSQSRYHEKT EQE++ERRRQ+PYHMHINLELLE VHLICAMLLEVPNMAAN+HDA+
Sbjct: 519  AQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMAANTHDAK 578

Query: 338  ARVISKNFRRLLEVSERHTFTGPPENVRDHVMAATRSLSKGDFQKAFDVIKLLDVWKLLR 159
             +VISK FRRLLEVSER TFTGPPENVRDHVMAATR+LSKGDFQKAFDVIK LD WKLLR
Sbjct: 579  RKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLLR 638

Query: 158  NQVSILEMLKTKFKEEALRTYLFTFSSTYKSLSLDQLTAMFDLSETQVHSIV 3
            N+  +LEML+ K KEEALRTYLFT+S +Y +LSLDQLT MFDLSET  HSI+
Sbjct: 639  NREDVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSII 690


>ref|XP_002281426.1| PREDICTED: eukaryotic translation initiation factor 3 subunit C-like
            [Vitis vinifera]
          Length = 946

 Score =  388 bits (997), Expect = e-106
 Identities = 190/232 (81%), Positives = 209/232 (90%)
 Frame = -2

Query: 698  DLLLMSHLQDGIQHMDILTQMLFNRTMAQLGLCAFRAGLIMEAHNCLSELYAGGRVRELI 519
            DLLLMSHLQD +QHMDI TQ+LFNR MAQLGLCAFR GLI E H CLSELY+GGRV+EL+
Sbjct: 539  DLLLMSHLQDNVQHMDISTQILFNRAMAQLGLCAFRVGLIAEGHGCLSELYSGGRVKELL 598

Query: 518  AQGVSQSRYHEKTAEQEKLERRRQVPYHMHINLELLESVHLICAMLLEVPNMAANSHDAR 339
            AQGVSQSRYHEKT EQE++ERRRQ+PYHMHINLELLE VHLICAMLLEVPNMAAN+HDA+
Sbjct: 599  AQGVSQSRYHEKTPEQERIERRRQMPYHMHINLELLEGVHLICAMLLEVPNMAANTHDAK 658

Query: 338  ARVISKNFRRLLEVSERHTFTGPPENVRDHVMAATRSLSKGDFQKAFDVIKLLDVWKLLR 159
             +VISK FRRLLEVSER TFTGPPENVRDHVMAATR+LSKGDFQKAFDVIK LD WKLLR
Sbjct: 659  RKVISKTFRRLLEVSERQTFTGPPENVRDHVMAATRALSKGDFQKAFDVIKSLDFWKLLR 718

Query: 158  NQVSILEMLKTKFKEEALRTYLFTFSSTYKSLSLDQLTAMFDLSETQVHSIV 3
            N+  +LEML+ K KEEALRTYLFT+S +Y +LSLDQLT MFDLSET  HSI+
Sbjct: 719  NREDVLEMLRAKIKEEALRTYLFTYSLSYNTLSLDQLTKMFDLSETLTHSII 770


>ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
            gi|334186011|ref|NP_001190102.1| translation initiation
            factor eIF-3 subunit 8 [Arabidopsis thaliana]
            gi|23503063|sp|O49160.2|EIF3C_ARATH RecName:
            Full=Eukaryotic translation initiation factor 3 subunit
            C; Short=eIF3c; AltName: Full=Eukaryotic translation
            initiation factor 3 subunit 8; AltName: Full=eIF3 p110;
            AltName: Full=p105 gi|7572913|emb|CAB87414.1| PROBABLE
            EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
            [Arabidopsis thaliana] gi|17381100|gb|AAL36362.1|
            putative eukaryotic translation initiation factor 3
            subunit 8 [Arabidopsis thaliana]
            gi|25054977|gb|AAN71960.1| putative eukaryotic
            translation initiation factor 3 subunit 8 [Arabidopsis
            thaliana] gi|332645965|gb|AEE79486.1| translation
            initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
            gi|332645966|gb|AEE79487.1| translation initiation factor
            eIF-3 subunit 8 [Arabidopsis thaliana]
          Length = 900

 Score =  384 bits (987), Expect = e-105
 Identities = 187/232 (80%), Positives = 215/232 (92%)
 Frame = -2

Query: 698  DLLLMSHLQDGIQHMDILTQMLFNRTMAQLGLCAFRAGLIMEAHNCLSELYAGGRVRELI 519
            DLLLMSHLQD IQHMDI TQ+LFNRTMAQLGLCAFRAG+I E+H+CLSELY+G RVREL+
Sbjct: 518  DLLLMSHLQDNIQHMDISTQILFNRTMAQLGLCAFRAGMITESHSCLSELYSGQRVRELL 577

Query: 518  AQGVSQSRYHEKTAEQEKLERRRQVPYHMHINLELLESVHLICAMLLEVPNMAANSHDAR 339
            AQGVSQSRYHEKT EQE++ERRRQ+PYHMH+NLELLE+VHLICAMLLEVPNMAANSHDA+
Sbjct: 578  AQGVSQSRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLICAMLLEVPNMAANSHDAK 637

Query: 338  ARVISKNFRRLLEVSERHTFTGPPENVRDHVMAATRSLSKGDFQKAFDVIKLLDVWKLLR 159
             RVISKNFRRLLE+SER  FT PPENVRDHVMAATR+L+KGDFQKAF+V+  L+VW+LL+
Sbjct: 638  RRVISKNFRRLLEISERQAFTAPPENVRDHVMAATRALTKGDFQKAFEVLNSLEVWRLLK 697

Query: 158  NQVSILEMLKTKFKEEALRTYLFTFSSTYKSLSLDQLTAMFDLSETQVHSIV 3
            N+ SIL+M+K + KEEALRTYLFT+SS+Y+SLSLDQL  MFD+SE QVHSIV
Sbjct: 698  NRDSILDMVKDRIKEEALRTYLFTYSSSYESLSLDQLAKMFDVSEPQVHSIV 749


>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
            lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
            ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
          Length = 888

 Score =  383 bits (983), Expect = e-104
 Identities = 186/232 (80%), Positives = 214/232 (92%)
 Frame = -2

Query: 698  DLLLMSHLQDGIQHMDILTQMLFNRTMAQLGLCAFRAGLIMEAHNCLSELYAGGRVRELI 519
            DLLLMSHLQD IQHMDI TQ+LFNRTMAQLGLCAFR G+I E+H+CLSELY+G RVREL+
Sbjct: 506  DLLLMSHLQDNIQHMDISTQILFNRTMAQLGLCAFRVGMITESHSCLSELYSGQRVRELL 565

Query: 518  AQGVSQSRYHEKTAEQEKLERRRQVPYHMHINLELLESVHLICAMLLEVPNMAANSHDAR 339
            AQGVSQSRYHEKT EQE++ERRRQ+PYHMH+NLELLE+VHLICAMLLEVPNMAANSHDA+
Sbjct: 566  AQGVSQSRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLICAMLLEVPNMAANSHDAK 625

Query: 338  ARVISKNFRRLLEVSERHTFTGPPENVRDHVMAATRSLSKGDFQKAFDVIKLLDVWKLLR 159
             RVISKNFRRLLE+SER  FT PPENVRDHVMAATR+L+KGDFQKAF+V+  L+VW+LL+
Sbjct: 626  RRVISKNFRRLLEISERQAFTAPPENVRDHVMAATRALTKGDFQKAFEVLNSLEVWRLLK 685

Query: 158  NQVSILEMLKTKFKEEALRTYLFTFSSTYKSLSLDQLTAMFDLSETQVHSIV 3
            N+ SIL+M+K + KEEALRTYLFT+SS+Y+SLSLDQL  MFD+SE QVHSIV
Sbjct: 686  NRDSILDMVKDRIKEEALRTYLFTYSSSYESLSLDQLAKMFDVSEPQVHSIV 737


>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
          Length = 900

 Score =  380 bits (976), Expect = e-103
 Identities = 185/232 (79%), Positives = 214/232 (92%)
 Frame = -2

Query: 698  DLLLMSHLQDGIQHMDILTQMLFNRTMAQLGLCAFRAGLIMEAHNCLSELYAGGRVRELI 519
            DLLLMSHLQD IQHMDI TQ+LFNRTMAQLGLCAFRAG+I E+H+CLSELY G RVREL+
Sbjct: 518  DLLLMSHLQDNIQHMDISTQILFNRTMAQLGLCAFRAGMITESHSCLSELYFGQRVRELL 577

Query: 518  AQGVSQSRYHEKTAEQEKLERRRQVPYHMHINLELLESVHLICAMLLEVPNMAANSHDAR 339
            AQGVSQSRYHEKT EQE++ERRRQ+PYHMH+NLELLE+VHLICAMLLEVPNMAANSHDA+
Sbjct: 578  AQGVSQSRYHEKTPEQERMERRRQMPYHMHLNLELLEAVHLICAMLLEVPNMAANSHDAK 637

Query: 338  ARVISKNFRRLLEVSERHTFTGPPENVRDHVMAATRSLSKGDFQKAFDVIKLLDVWKLLR 159
             RVISKNFRRLLE+SER  FT PPENVRDHVMAATR+L+KGDFQKAF+V+  L+VW+LL+
Sbjct: 638  RRVISKNFRRLLEISERQAFTAPPENVRDHVMAATRALTKGDFQKAFEVLNSLEVWRLLK 697

Query: 158  NQVSILEMLKTKFKEEALRTYLFTFSSTYKSLSLDQLTAMFDLSETQVHSIV 3
            N+ SIL+M+K + +EEA+RTYLFT+SS+Y+SLSLDQL  MFD+SE QVHSIV
Sbjct: 698  NRDSILDMVKDRVQEEAVRTYLFTYSSSYESLSLDQLAKMFDVSEPQVHSIV 749


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