BLASTX nr result

ID: Papaver23_contig00014051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00014051
         (695 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containi...    64   4e-08
ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|2...    63   6e-08
ref|XP_002525536.1| pentatricopeptide repeat-containing protein,...    59   9e-07

>ref|XP_003634944.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
           mitochondrial-like [Vitis vinifera]
          Length = 582

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 29/89 (32%), Positives = 55/89 (61%)
 Frame = +3

Query: 426 GLDRRRNHNEEKEVVQIVELIKRDGSELKNKINLMDVNISLDFVREVFLRLNYDGVSGLH 605
           G+D    +   K + +I+++I+ D  +++ K+NLM++ +S+  V E+F  LN + +S + 
Sbjct: 193 GIDELVPNMSPKRISEIIKVIRSDEIDMEVKLNLMNLRLSVASVTEIFRVLNLERLSAMR 252

Query: 606 FFCWLSETHICFKRSSVFCSMVIDNLGRV 692
           FF W+S +     R+   CS++IDN GR+
Sbjct: 253 FFEWISHSRSGLSRNYDICSLIIDNCGRL 281


>ref|XP_002325952.1| predicted protein [Populus trichocarpa] gi|222862827|gb|EEF00334.1|
           predicted protein [Populus trichocarpa]
          Length = 432

 Score = 62.8 bits (151), Expect = 6e-08
 Identities = 35/92 (38%), Positives = 53/92 (57%)
 Frame = +3

Query: 420 KFGLDRRRNHNEEKEVVQIVELIKRDGSELKNKINLMDVNISLDFVREVFLRLNYDGVSG 599
           + G  R R    +K+V  I++LIKRD  +L+ K+  + V +S+  V  VF  LN + VS 
Sbjct: 47  EMGTGRVRPKAMQKQVAYIIDLIKRDEYDLEYKLGSLSVKLSIASVTLVFHVLNSEKVSA 106

Query: 600 LHFFCWLSETHICFKRSSVFCSMVIDNLGRVE 695
           L FF W+       + +S  CS+VIDN GR++
Sbjct: 107 LRFFRWIRHWQPELRCNSDICSLVIDNCGRLD 138


>ref|XP_002525536.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535215|gb|EEF36894.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 430

 Score = 58.9 bits (141), Expect = 9e-07
 Identities = 34/104 (32%), Positives = 53/104 (50%)
 Frame = +3

Query: 384 YELEELDRGVNLKFGLDRRRNHNEEKEVVQIVELIKRDGSELKNKINLMDVNISLDFVRE 563
           Y +   D  +  K   D  R     K+V  I+ L+  + +EL+ K+N + V +S+  VR 
Sbjct: 34  YSVSSSDASLYKKLHTDELRPKATRKQVSVIIGLLITEDNELETKLNSLGVRLSIGSVRW 93

Query: 564 VFLRLNYDGVSGLHFFCWLSETHICFKRSSVFCSMVIDNLGRVE 695
           VF  LN +  S L FF W+       + +S  CS+VIDN G ++
Sbjct: 94  VFQVLNREKKSALQFFHWIRRWQPELEGNSDICSLVIDNCGHLD 137


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