BLASTX nr result

ID: Papaver23_contig00013955 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013955
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional...   136   5e-30
gb|AFK40203.1| unknown [Lotus japonicus]                              134   2e-29
ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional...   134   3e-29
ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycin...   128   1e-27
ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycin...   126   6e-27

>ref|XP_004146395.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like
           [Cucumis sativus] gi|449527765|ref|XP_004170880.1|
           PREDICTED: RNA polymerase II transcriptional coactivator
           KIWI-like [Cucumis sativus]
          Length = 104

 Score =  136 bits (343), Expect = 5e-30
 Identities = 67/98 (68%), Positives = 79/98 (80%)
 Frame = -2

Query: 730 KRKDEGDFIDDGDVKARKNPKKASAADDSDSIVVCEISKNRRVSVRNWQGKVVVDIREFY 551
           KRK + D + +GD    K  KK S  DD+D IVVCE+SKNRRV VRNWQGK+VVDIREFY
Sbjct: 6   KRKGDEDDVSEGDAPPSKTFKKDS--DDTDEIVVCELSKNRRVMVRNWQGKIVVDIREFY 63

Query: 550 VKDGQEFPGKKGISLSMDQWNILRDHVEEIDKAVAGDS 437
           VKDG++ PGKKGISLS+DQWN+L +HVEEIDKAV  +S
Sbjct: 64  VKDGKQMPGKKGISLSLDQWNVLLNHVEEIDKAVNENS 101


>gb|AFK40203.1| unknown [Lotus japonicus]
          Length = 106

 Score =  134 bits (338), Expect = 2e-29
 Identities = 65/97 (67%), Positives = 78/97 (80%), Gaps = 3/97 (3%)
 Frame = -2

Query: 730 KRKDEGDFIDDGDVKARKNPKKASAAD---DSDSIVVCEISKNRRVSVRNWQGKVVVDIR 560
           K++D+ D   D D  +   PKK+   D   D DSIVVCEISKNRRVSVRNWQG++VVDI 
Sbjct: 6   KKRDDLDRASDADSDSHAPPKKSLKKDSDEDPDSIVVCEISKNRRVSVRNWQGRIVVDIL 65

Query: 559 EFYVKDGQEFPGKKGISLSMDQWNILRDHVEEIDKAV 449
           EFYVKDG++ PGKKGISL+MDQWN+LR+H+EEIDKAV
Sbjct: 66  EFYVKDGKQMPGKKGISLTMDQWNVLRNHIEEIDKAV 102


>ref|XP_002275126.1| PREDICTED: RNA polymerase II transcriptional coactivator KIWI
           [Vitis vinifera] gi|147846591|emb|CAN79502.1|
           hypothetical protein VITISV_022689 [Vitis vinifera]
           gi|296082597|emb|CBI21602.3| unnamed protein product
           [Vitis vinifera]
          Length = 103

 Score =  134 bits (336), Expect = 3e-29
 Identities = 65/102 (63%), Positives = 79/102 (77%)
 Frame = -2

Query: 742 WRNRKRKDEGDFIDDGDVKARKNPKKASAADDSDSIVVCEISKNRRVSVRNWQGKVVVDI 563
           W  RK+    D   D    ++K+  K S  DD D+I+VCEIS+NRRVSVRNWQGKV VDI
Sbjct: 4   WGKRKQSYASDGDSDDHAPSKKSSMKDS--DDPDNIIVCEISRNRRVSVRNWQGKVQVDI 61

Query: 562 REFYVKDGQEFPGKKGISLSMDQWNILRDHVEEIDKAVAGDS 437
           REFYVKDG++ PGKKGISL+MDQWN+LRDHV EID+AVA ++
Sbjct: 62  REFYVKDGKQMPGKKGISLTMDQWNVLRDHVNEIDEAVADNA 103


>ref|NP_001241012.1| uncharacterized protein LOC100820368 [Glycine max]
           gi|255637253|gb|ACU18957.1| unknown [Glycine max]
          Length = 105

 Score =  128 bits (322), Expect = 1e-27
 Identities = 63/101 (62%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
 Frame = -2

Query: 730 KRKDEGDFID---DGDVKARKNPKKASAADDSDSIVVCEISKNRRVSVRNWQGKVVVDIR 560
           KR+D+ D  D   +G     K+ KK S  DD DS+ +CEISKNRRV+VRNW+G ++VDIR
Sbjct: 6   KRRDDDDASDADSEGHAPPMKSLKKDSD-DDPDSVTICEISKNRRVAVRNWKGSIMVDIR 64

Query: 559 EFYVKDGQEFPGKKGISLSMDQWNILRDHVEEIDKAVAGDS 437
           EFYVKDG++ PG+KGISL+MDQWN+LR+HVEEIDKAV  +S
Sbjct: 65  EFYVKDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAVNENS 105


>ref|NP_001238257.1| uncharacterized protein LOC100499936 [Glycine max]
           gi|255627821|gb|ACU14255.1| unknown [Glycine max]
          Length = 105

 Score =  126 bits (316), Expect = 6e-27
 Identities = 61/101 (60%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
 Frame = -2

Query: 730 KRKDEGDFIDDGDVKARKNPKKA---SAADDSDSIVVCEISKNRRVSVRNWQGKVVVDIR 560
           KR+D+ D   D D +    PKK+    + DD DSI VCEI KNRRV+VRNW+G ++VDIR
Sbjct: 6   KRRDD-DGASDADSEGHAPPKKSLKKDSDDDPDSITVCEILKNRRVAVRNWKGSIMVDIR 64

Query: 559 EFYVKDGQEFPGKKGISLSMDQWNILRDHVEEIDKAVAGDS 437
           EFYV+DG++ PG+KGISL+MDQWN+LR+HVEEIDKA+  +S
Sbjct: 65  EFYVEDGKQLPGRKGISLTMDQWNVLRNHVEEIDKAINENS 105


Top