BLASTX nr result

ID: Papaver23_contig00013339 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013339
         (540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [...   233   1e-59
ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58
emb|CBI25844.3| unnamed protein product [Vitis vinifera]              226   2e-57
ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glyc...   224   8e-57
ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-...   223   1e-56

>ref|XP_002530660.1| DNA mismatch repair protein mutS, putative [Ricinus communis]
           gi|223529793|gb|EEF31729.1| DNA mismatch repair protein
           mutS, putative [Ricinus communis]
          Length = 553

 Score =  233 bits (594), Expect = 1e-59
 Identities = 113/142 (79%), Positives = 128/142 (90%)
 Frame = -3

Query: 538 CEHLVSLKAYTIFATHMENLSELSTIYPNVKILHFDVDVKNNCLDFKFQLKDGIRHVPHY 359
           CEHL+SLKAYTIFATHMENLSEL+TIYPNVK+LH DV VKNN LDFKFQLKDG RHVPHY
Sbjct: 412 CEHLLSLKAYTIFATHMENLSELATIYPNVKLLHLDVTVKNNRLDFKFQLKDGPRHVPHY 471

Query: 358 GLLLAGIAGLPSSVIETARSITSKITEMEARRMEVNCMEYNSIQMVYRIAQRLICLKYSN 179
           GLLLA +AGLPSSVIETARSITSKI E E  +MEV+C +Y  +QM+Y +AQRLICLKYS+
Sbjct: 472 GLLLAEVAGLPSSVIETARSITSKIKEKEITQMEVHCHQYRQLQMIYHVAQRLICLKYSS 531

Query: 178 QDEDSIREALQNLKESYIEEKL 113
           QDEDSIR+ALQNLKESY++ K+
Sbjct: 532 QDEDSIRQALQNLKESYMDGKI 553


>ref|XP_002326462.1| predicted protein [Populus trichocarpa] gi|222833784|gb|EEE72261.1|
           predicted protein [Populus trichocarpa]
          Length = 700

 Score =  229 bits (583), Expect = 3e-58
 Identities = 110/142 (77%), Positives = 128/142 (90%)
 Frame = -3

Query: 538 CEHLVSLKAYTIFATHMENLSELSTIYPNVKILHFDVDVKNNCLDFKFQLKDGIRHVPHY 359
           CEHL+SLKAY+IFATHMENLSEL+TIYPNV+I+HF VD+K+N LDFKFQL+DG RHVPHY
Sbjct: 559 CEHLLSLKAYSIFATHMENLSELATIYPNVRIVHFHVDIKSNRLDFKFQLEDGPRHVPHY 618

Query: 358 GLLLAGIAGLPSSVIETARSITSKITEMEARRMEVNCMEYNSIQMVYRIAQRLICLKYSN 179
           GLLLA +AGLPSSVIE ARSITSKITE + ++ EVNC +Y+ +QMVYR+AQRLICLK+SN
Sbjct: 619 GLLLAEVAGLPSSVIEMARSITSKITEKQTKQTEVNCRQYHQLQMVYRVAQRLICLKHSN 678

Query: 178 QDEDSIREALQNLKESYIEEKL 113
           QDEDSIR+ALQNLKE YI   L
Sbjct: 679 QDEDSIRQALQNLKEQYINGTL 700


>emb|CBI25844.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  226 bits (576), Expect = 2e-57
 Identities = 109/134 (81%), Positives = 124/134 (92%)
 Frame = -3

Query: 514 AYTIFATHMENLSELSTIYPNVKILHFDVDVKNNCLDFKFQLKDGIRHVPHYGLLLAGIA 335
           +YTIFATHMENLSEL+TIYPNVKILHFDVD+KN+ LDFKFQLKDG RHVPHYGLLLAG+A
Sbjct: 11  SYTIFATHMENLSELATIYPNVKILHFDVDIKNSRLDFKFQLKDGPRHVPHYGLLLAGVA 70

Query: 334 GLPSSVIETARSITSKITEMEARRMEVNCMEYNSIQMVYRIAQRLICLKYSNQDEDSIRE 155
           GLPSSVI+TA SITS+ITE E +RMEVNC +Y+ IQM YR+AQRLICLKYS+QDEDS+R 
Sbjct: 71  GLPSSVIKTAISITSRITEKEVKRMEVNCQQYHPIQMAYRLAQRLICLKYSSQDEDSVRH 130

Query: 154 ALQNLKESYIEEKL 113
           ALQNLKESYI+ +L
Sbjct: 131 ALQNLKESYIDGRL 144


>ref|XP_003538746.1| PREDICTED: mutS protein homolog 4-like [Glycine max]
          Length = 794

 Score =  224 bits (570), Expect = 8e-57
 Identities = 104/142 (73%), Positives = 128/142 (90%)
 Frame = -3

Query: 538  CEHLVSLKAYTIFATHMENLSELSTIYPNVKILHFDVDVKNNCLDFKFQLKDGIRHVPHY 359
            CEHL+SLK YT+FATHMEN+SEL T+YPNVKILHFDV++KNN LDFKFQLK+G + +PHY
Sbjct: 651  CEHLLSLKTYTVFATHMENISELVTMYPNVKILHFDVELKNNHLDFKFQLKEGSKRIPHY 710

Query: 358  GLLLAGIAGLPSSVIETARSITSKITEMEARRMEVNCMEYNSIQMVYRIAQRLICLKYSN 179
            GLLLA +AGLPSSV+ETAR ITS+I+E E +RMEVNC++++SIQ  Y +AQRL+CLKY N
Sbjct: 711  GLLLAEVAGLPSSVVETARMITSRISEKEVKRMEVNCLQHHSIQKAYHVAQRLLCLKYCN 770

Query: 178  QDEDSIREALQNLKESYIEEKL 113
            QDED+IR+AL+NLKES I+EKL
Sbjct: 771  QDEDTIRQALRNLKESCIKEKL 792


>ref|XP_004169721.1| PREDICTED: DNA mismatch repair protein MSH4-like, partial [Cucumis
            sativus]
          Length = 770

 Score =  223 bits (568), Expect = 1e-56
 Identities = 107/142 (75%), Positives = 126/142 (88%)
 Frame = -3

Query: 538  CEHLVSLKAYTIFATHMENLSELSTIYPNVKILHFDVDVKNNCLDFKFQLKDGIRHVPHY 359
            CE+L++LKAYTIFATHME LSEL+TIYPNVKILHF VD++N+ LDFKFQLKDGIRHVPHY
Sbjct: 629  CEYLLTLKAYTIFATHMEGLSELATIYPNVKILHFHVDIRNHRLDFKFQLKDGIRHVPHY 688

Query: 358  GLLLAGIAGLPSSVIETARSITSKITEMEARRMEVNCMEYNSIQMVYRIAQRLICLKYSN 179
            GLLLA +AGLPSSVIETAR ITS+I E E RRME+N ++Y+ I+M Y +AQRLICLKYS+
Sbjct: 689  GLLLAEVAGLPSSVIETARDITSRIKEKEERRMEINHLQYHPIRMTYNVAQRLICLKYSS 748

Query: 178  QDEDSIREALQNLKESYIEEKL 113
             DEDS+REAL+NLKE YI  +L
Sbjct: 749  HDEDSVREALRNLKEGYISGRL 770


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