BLASTX nr result

ID: Papaver23_contig00013313 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00013313
         (466 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glyci...   260   9e-68
ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glyci...   259   2e-67
ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vini...   251   6e-65
ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucum...   250   7e-65
ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucum...   250   7e-65

>ref|XP_003532202.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  260 bits (664), Expect = 9e-68
 Identities = 120/128 (93%), Positives = 125/128 (97%)
 Frame = -2

Query: 384 QVPFKNNLHSREFQGHKKKVHSVAWNCLGTKLASGSVDQTARIWHIEPHGHGKVKDIELK 205
           Q+PFKN LHSRE+ GHKKKVHSVAWNC+GTKLASGSVDQTARIWHIEPHGHGKVKDIELK
Sbjct: 4   QIPFKN-LHSREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELK 62

Query: 204 GHTDSVDQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 25
           GHTDSVDQLCWDPKHA+LIATASGDKTVRLWDARSGKCSQQ ELSGENINITYKPDGTH+
Sbjct: 63  GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHV 122

Query: 24  AVGNRDDE 1
           AVGNRDDE
Sbjct: 123 AVGNRDDE 130


>ref|XP_003551358.1| PREDICTED: THO complex subunit 3-like [Glycine max]
          Length = 313

 Score =  259 bits (661), Expect = 2e-67
 Identities = 119/128 (92%), Positives = 125/128 (97%)
 Frame = -2

Query: 384 QVPFKNNLHSREFQGHKKKVHSVAWNCLGTKLASGSVDQTARIWHIEPHGHGKVKDIELK 205
           Q+PFKN LH+RE+ GHKKKVHSVAWNC+GTKLASGSVDQTARIWHIEPHGHGKVKDIELK
Sbjct: 4   QIPFKN-LHNREYSGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIELK 62

Query: 204 GHTDSVDQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHI 25
           GHTDSVDQLCWDPKHA+LIATASGDKTVRLWDARSGKCSQQ ELSGENINITYKPDGTH+
Sbjct: 63  GHTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCSQQAELSGENINITYKPDGTHV 122

Query: 24  AVGNRDDE 1
           AVGNRDDE
Sbjct: 123 AVGNRDDE 130


>ref|XP_002274754.1| PREDICTED: THO complex subunit 3 [Vitis vinifera]
           gi|147789347|emb|CAN62349.1| hypothetical protein
           VITISV_004943 [Vitis vinifera]
           gi|296089987|emb|CBI39806.3| unnamed protein product
           [Vitis vinifera]
          Length = 313

 Score =  251 bits (640), Expect = 6e-65
 Identities = 118/127 (92%), Positives = 122/127 (96%)
 Frame = -2

Query: 381 VPFKNNLHSREFQGHKKKVHSVAWNCLGTKLASGSVDQTARIWHIEPHGHGKVKDIELKG 202
           +PFKN LHSRE+QGHKKKVHSVAWNC GTKLASGSVDQTARIW IE HGHGKVKDIELKG
Sbjct: 5   IPFKN-LHSREYQGHKKKVHSVAWNCTGTKLASGSVDQTARIWLIEQHGHGKVKDIELKG 63

Query: 201 HTDSVDQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIA 22
           HTDSVDQLCWDPKHA+LIATASGDKTVRLWDARSGKC+QQ ELSGENINITYKPDGTHIA
Sbjct: 64  HTDSVDQLCWDPKHADLIATASGDKTVRLWDARSGKCTQQAELSGENINITYKPDGTHIA 123

Query: 21  VGNRDDE 1
           VGNRDDE
Sbjct: 124 VGNRDDE 130


>ref|XP_004170178.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  250 bits (639), Expect = 7e-65
 Identities = 113/122 (92%), Positives = 119/122 (97%)
 Frame = -2

Query: 366 NLHSREFQGHKKKVHSVAWNCLGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTDSV 187
           NLHSRE+QGHKKKVHSVAWNC G KLASGSVDQTAR+WHIEPHGHGKVKD+ELKGHTDSV
Sbjct: 10  NLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSV 69

Query: 186 DQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGNRD 7
           DQLCWDPKH++LIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGTHIAVGNRD
Sbjct: 70  DQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRD 129

Query: 6   DE 1
           DE
Sbjct: 130 DE 131


>ref|XP_004149572.1| PREDICTED: THO complex subunit 3-like [Cucumis sativus]
          Length = 314

 Score =  250 bits (639), Expect = 7e-65
 Identities = 113/122 (92%), Positives = 119/122 (97%)
 Frame = -2

Query: 366 NLHSREFQGHKKKVHSVAWNCLGTKLASGSVDQTARIWHIEPHGHGKVKDIELKGHTDSV 187
           NLHSRE+QGHKKKVHSVAWNC G KLASGSVDQTAR+WHIEPHGHGKVKD+ELKGHTDSV
Sbjct: 10  NLHSREYQGHKKKVHSVAWNCTGMKLASGSVDQTARVWHIEPHGHGKVKDVELKGHTDSV 69

Query: 186 DQLCWDPKHAELIATASGDKTVRLWDARSGKCSQQVELSGENINITYKPDGTHIAVGNRD 7
           DQLCWDPKH++LIATASGDKTVRLWDAR+GKCSQQ ELSGENINITYKPDGTHIAVGNRD
Sbjct: 70  DQLCWDPKHSDLIATASGDKTVRLWDARNGKCSQQAELSGENINITYKPDGTHIAVGNRD 129

Query: 6   DE 1
           DE
Sbjct: 130 DE 131


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